prot_S-ischiensis_contig9.20704.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig9.20704.1
Unique Nameprot_S-ischiensis_contig9.20704.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length82
Homology
BLAST of mRNA_S-ischiensis_contig9.20704.1 vs. uniprot
Match: A0A6H5KQ21_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ21_9PHAE)

HSP 1 Score: 68.2 bits (165), Expect = 1.660e-11
Identity = 36/73 (49.32%), Postives = 40/73 (54.79%), Query Frame = 0
Query:   20 AVPVVLCDRCDATYHLRCLRPPLREAPRGFATWHCPKCIRPELAEVG-----------LSRPTPRVGYGCRSR 81
            A   V+CD CDATYHL CLRPPL + PRG   W CP C+ P  A  G           L R  P  G+GCRSR
Sbjct: 1518 APATVVCDFCDATYHLGCLRPPLAQVPRG--EWFCPACVCPGTAGGGXXGWGQATGATLVRRPPEGGFGCRSR 1588          
BLAST of mRNA_S-ischiensis_contig9.20704.1 vs. uniprot
Match: D8LI13_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI13_ECTSI)

HSP 1 Score: 67.8 bits (164), Expect = 2.270e-11
Identity = 35/73 (47.95%), Postives = 39/73 (53.42%), Query Frame = 0
Query:   20 AVPVVLCDRCDATYHLRCLRPPLREAPRGFATWHCPKCIRPELAEVG-----------LSRPTPRVGYGCRSR 81
            A   V+CD CDATYHL CL PPL + PRG   W CP C+ P  A  G           L R  P  G+GCRSR
Sbjct: 1124 APATVVCDFCDATYHLGCLHPPLAQVPRG--EWFCPACVCPGTAAAGGGGWGQATGATLVRRPPEGGFGCRSR 1194          
BLAST of mRNA_S-ischiensis_contig9.20704.1 vs. uniprot
Match: UPI0010BD021D (lysine-specific demethylase 5A n=1 Tax=Galendromus occidentalis TaxID=34638 RepID=UPI0010BD021D)

HSP 1 Score: 57.8 bits (138), Expect = 7.530e-8
Identity = 25/55 (45.45%), Postives = 35/55 (63.64%), Query Frame = 0
Query:   23 VVLCDRCDATYHLRCLRPPLREAPRGFATWHCPKCIRPELAEVGLSRPTPRVGYG 77
            +++CD+CD ++HL CLRPPL E PRG   W CPKC+  E+        TP+  +G
Sbjct:  290 LLMCDKCDYSFHLFCLRPPLHEVPRG--EWRCPKCVANEVL-------TPKEAFG 335          
BLAST of mRNA_S-ischiensis_contig9.20704.1 vs. uniprot
Match: A0A0A9Z783_LYGHE (PHD and RING finger domain-containing protein 1 (Fragment) n=2 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9Z783_LYGHE)

HSP 1 Score: 56.6 bits (135), Expect = 1.240e-7
Identity = 25/52 (48.08%), Postives = 32/52 (61.54%), Query Frame = 0
Query:   23 VVLCDRCDATYHLRCLRPPLREAPRGFATWHCPKCIRPELAEVGLSRPTPRV 74
            ++LCDRC+A YHL CL PPLR  P G  +W CP+C  P    V  +   PR+
Sbjct:  191 MLLCDRCEAGYHLDCLTPPLRAVPDG--SWFCPRCTDPNNESVTHNPDEPRI 240          
BLAST of mRNA_S-ischiensis_contig9.20704.1 vs. uniprot
Match: A0A0A9Y9M1_LYGHE (PHD and RING finger domain-containing protein 1 n=3 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9Y9M1_LYGHE)

HSP 1 Score: 56.6 bits (135), Expect = 1.550e-7
Identity = 25/52 (48.08%), Postives = 32/52 (61.54%), Query Frame = 0
Query:   23 VVLCDRCDATYHLRCLRPPLREAPRGFATWHCPKCIRPELAEVGLSRPTPRV 74
            ++LCDRC+A YHL CL PPLR  P G  +W CP+C  P    V  +   PR+
Sbjct:  235 MLLCDRCEAGYHLDCLTPPLRAVPDG--SWFCPRCTDPNNESVTHNPDEPRI 284          
BLAST of mRNA_S-ischiensis_contig9.20704.1 vs. uniprot
Match: UPI00188E0B55 (PHD and RING finger domain-containing protein 1 isoform X1 n=3 Tax=Talpa occidentalis TaxID=50954 RepID=UPI00188E0B55)

HSP 1 Score: 55.1 bits (131), Expect = 6.730e-7
Identity = 24/43 (55.81%), Postives = 29/43 (67.44%), Query Frame = 0
Query:   23 VVLCDRCDATYHLRCLRPPLREAPRGFATWHCPKCIRPELAEV 65
            ++LCD CDA YH+ CLRPPL+E P     W CP+C  PE A V
Sbjct:  297 LLLCDGCDAGYHMECLRPPLQEVP--VDEWFCPECAAPEGAAV 337          
BLAST of mRNA_S-ischiensis_contig9.20704.1 vs. uniprot
Match: A0A146L8A2_LYGHE (PHD and RING finger domain-containing protein 1 n=3 Tax=Lygus hesperus TaxID=30085 RepID=A0A146L8A2_LYGHE)

HSP 1 Score: 54.7 bits (130), Expect = 8.900e-7
Identity = 26/44 (59.09%), Postives = 31/44 (70.45%), Query Frame = 0
Query:   23 VVLCDRCDATYHLRCLRPPLREAPRGFATWHCPKCIRP--ELAE 64
            ++LCDRC+A YHL CL PPLR  P G  +W CP+C  P  ELAE
Sbjct:  235 MLLCDRCEAGYHLDCLTPPLRAVPDG--SWFCPRCTDPNNELAE 276          
BLAST of mRNA_S-ischiensis_contig9.20704.1 vs. uniprot
Match: A0A0A9Y419_LYGHE (PHD and RING finger domain-containing protein 1 n=2 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9Y419_LYGHE)

HSP 1 Score: 54.7 bits (130), Expect = 9.150e-7
Identity = 26/44 (59.09%), Postives = 31/44 (70.45%), Query Frame = 0
Query:   23 VVLCDRCDATYHLRCLRPPLREAPRGFATWHCPKCIRP--ELAE 64
            ++LCDRC+A YHL CL PPLR  P G  +W CP+C  P  ELAE
Sbjct:  235 MLLCDRCEAGYHLDCLTPPLRAVPDG--SWFCPRCTDPNNELAE 276          
BLAST of mRNA_S-ischiensis_contig9.20704.1 vs. uniprot
Match: A0A2D4C5K6_PYTIN (Uncharacterized protein (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C5K6_PYTIN)

HSP 1 Score: 54.7 bits (130), Expect = 9.250e-7
Identity = 21/36 (58.33%), Postives = 28/36 (77.78%), Query Frame = 0
Query:   23 VVLCDRCDATYHLRCLRPPLREAPRGFATWHCPKCI 58
            ++LCDRCDA+YH  CL PPLR+ P+G   W CP+C+
Sbjct: 1135 LLLCDRCDASYHTFCLTPPLRDVPKG--EWFCPRCL 1168          
BLAST of mRNA_S-ischiensis_contig9.20704.1 vs. uniprot
Match: A0A512U6Y2_9ASCO (Uncharacterized protein n=1 Tax=Metschnikowia sp. JCM 33374 TaxID=2562755 RepID=A0A512U6Y2_9ASCO)

HSP 1 Score: 54.3 bits (129), Expect = 1.230e-6
Identity = 20/35 (57.14%), Postives = 27/35 (77.14%), Query Frame = 0
Query:   24 VLCDRCDATYHLRCLRPPLREAPRGFATWHCPKCI 58
            +LCD CD +YH+RCLRPPL E P+G   W+C +C+
Sbjct:  201 LLCDNCDDSYHMRCLRPPLEEVPKG--AWYCERCL 233          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig9.20704.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KQ21_9PHAE1.660e-1149.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LI13_ECTSI2.270e-1147.95Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
UPI0010BD021D7.530e-845.45lysine-specific demethylase 5A n=1 Tax=Galendromus... [more]
A0A0A9Z783_LYGHE1.240e-748.08PHD and RING finger domain-containing protein 1 (F... [more]
A0A0A9Y9M1_LYGHE1.550e-748.08PHD and RING finger domain-containing protein 1 n=... [more]
UPI00188E0B556.730e-755.81PHD and RING finger domain-containing protein 1 is... [more]
A0A146L8A2_LYGHE8.900e-759.09PHD and RING finger domain-containing protein 1 n=... [more]
A0A0A9Y419_LYGHE9.150e-759.09PHD and RING finger domain-containing protein 1 n=... [more]
A0A2D4C5K6_PYTIN9.250e-758.33Uncharacterized protein (Fragment) n=1 Tax=Pythium... [more]
A0A512U6Y2_9ASCO1.230e-657.14Uncharacterized protein n=1 Tax=Metschnikowia sp. ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001965Zinc finger, PHD-typeSMARTSM00249PHD_3coord: 18..58
e-value: 2.5E-4
score: 30.4
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 7..64
e-value: 2.3E-13
score: 51.7
IPR019787Zinc finger, PHD-fingerPFAMPF00628PHDcoord: 22..58
e-value: 2.6E-10
score: 40.0
NoneNo IPR availablePANTHERPTHR47162:SF3coord: 23..62
NoneNo IPR availablePANTHERPTHR47162FAMILY NOT NAMEDcoord: 23..62
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 22..59

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig9contigS-ischiensis_contig9:2716725..2716970 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig9.20704.1mRNA_S-ischiensis_contig9.20704.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig9 2716725..2716972 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig9.20704.1 ID=prot_S-ischiensis_contig9.20704.1|Name=mRNA_S-ischiensis_contig9.20704.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=82bp
LSGGDGQGSGSGGGGGGGKAVPVVLCDRCDATYHLRCLRPPLREAPRGFA
TWHCPKCIRPELAEVGLSRPTPRVGYGCRSRL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001965Znf_PHD
IPR013083Znf_RING/FYVE/PHD
IPR019787Znf_PHD-finger
IPR011011Znf_FYVE_PHD