prot_S-ischiensis_contig9.20658.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_S-ischiensis_contig9.20658.1
Unique Name	prot_S-ischiensis_contig9.20658.1
Type	polypeptide
Organism	Schizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length	251

Homology

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BLAST of mRNA_S-ischiensis_contig9.20658.1 vs. uniprot
Match: A0A2I6U1M4_SACJA (Tic20-like protein n=15 Tax=Saccharina japonica TaxID=88149 RepID=A0A2I6U1M4_SACJA)

HSP 1 Score: 187 bits (474), Expect = 1.890e-53
Identity = 115/228 (50.44%), Postives = 151/228 (66.23%), Query Frame = 0

Query:    4 SSPVDV---QAERLREQASQLRAEAAALQSQMNEERQGAALRSFNTFDSNGDGQVDVVGLRTGLERALRRDFVKRLKARMGGVPPTARQVEAKIAEMPGGRLLPEEPLRQLLEAYDKNGDGVLQPEEFARTEAI-------FQKQREEKRLSRVAEWEKTRAEKEKAAKVEMARSLGVALPED-FNDGAPTALDKAVSGLPYLLPLLDGLVFAGHLFSAYPEQFAWAQ 220
            SS V+V   +A RLRE A+  RA+AA L+ +  +ERQ  A RSFN+FDSN DG VD+V L+ GLE  LRR FVK+L ARMG   P   +++A+IA +PGG L P++  R+L++ YD+NGDG+LQ  EFA TE +       F+ Q+E  R +RV E ++   +K  A   E+    G  +P    NDG  TA DKA+S LPYLLPL+DG+ FAGHLF A+PEQ AWAQ
Sbjct:   66 SSEVEVAQEKAARLRETAAAFRAQAAELEDKRTQERQAGAERSFNSFDSNQDGAVDIVELKAGLEGPLRRSFVKQLTARMGR-KPDREEIDARIAALPGGSLFPDDLARKLIDTYDQNGDGLLQRSEFAPTEELRTRLENMFRDQQETARQARVEERQRQMEDKLAA---EVGTGAGAVVPAGGVNDGPATAADKALSALPYLLPLVDGISFAGHLFGAFPEQTAWAQ 289

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BLAST of mRNA_S-ischiensis_contig9.20658.1 vs. uniprot
Match: D8LS19_ECTSI (EF-hand domain-containing protein n=7 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS19_ECTSI)

HSP 1 Score: 175 bits (443), Expect = 7.400e-49
Identity = 108/226 (47.79%), Postives = 141/226 (62.39%), Query Frame = 0

Query:    4 SSPVDVQAERLREQASQLRAEAAALQSQMNEERQGAALRSFNTFDSNGDGQVDVVGLRTGLERALRRDFVKRLKARMGGVPPTARQVEAKIAEMPGGRLLPEEPLRQLLEAYDKNGDGVLQPEEFARTEAI-------FQKQREEKRLSRVAEWEKTRAEKEKAAKVEMARSLG--VALPEDFNDGAPTALDKAVSGLPYLLPLLDGLVFAGHLFSAYPEQFAWAQ 220
            S   + +A +LRE A+  RAEAA L+ +   ER+  A RSFNTFDSN DG VDV  L+ GLE  LRR F K L+ARMG   P+  +V+ +IA +PGG L P++   +L++ YD+NGDG+LQ  EFA TE +       F +QREE+R++R+        ++       M    G  V  P D NDG  T  DKA+S LPY+LPL DG+VFA HLF A+PEQ AWAQ
Sbjct:   71 SEVAEQRAAKLRETAAAFRAEAAELEQKQARERRENAQRSFNTFDSNKDGSVDVAELKAGLEGPLRRSFTKTLQARMGR-KPSKEEVDDRIAGLPGGTLFPDDLALKLIQTYDQNGDGLLQQSEFAPTEELRTRLENLFSQQREEERVARMEXXXXXXXDR-------MRPDAGTVVVSPGDVNDGPATTADKALSALPYVLPLADGVVFAAHLFGAFPEQTAWAQ 288

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BLAST of mRNA_S-ischiensis_contig9.20658.1 vs. uniprot
Match: D7FRG5_ECTSI (EF-hand domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRG5_ECTSI)

HSP 1 Score: 174 bits (440), Expect = 1.500e-48
Identity = 107/226 (47.35%), Postives = 140/226 (61.95%), Query Frame = 0

Query:    4 SSPVDVQAERLREQASQLRAEAAALQSQMNEERQGAALRSFNTFDSNGDGQVDVVGLRTGLERALRRDFVKRLKARMGGVPPTARQVEAKIAEMPGGRLLPEEPLRQLLEAYDKNGDGVLQPEEFARTEAI-------FQKQREEKRLSRVAEWEKTRAEKEKAAKVEMARSLG--VALPEDFNDGAPTALDKAVSGLPYLLPLLDGLVFAGHLFSAYPEQFAWAQ 220
            S   + +A +LRE A+  RAE          ER+  ALRSFNTFDSN DG VD+  L+ GLE  LRR F K L+ARMG   P+  +V+ +IA +PGG L P+E   +L++ YD+NGDG+LQ  EFA TE +         +QRE++RL+R+ E ++   +K       M    G  V  P D NDG  T  DKA+S LPYLLPL+DG++FA HLF A+PEQ AWAQ
Sbjct:   71 SKVAEQKAAKLRETAAAFRAEXXXXXXXXARERRENALRSFNTFDSNKDGSVDIAELKAGLESPLRRSFTKTLQARMGR-KPSKEEVDERIAGLPGGTLFPDELALKLIQTYDQNGDGLLQQSEFAPTEELRTRLENLLSQQREDERLARLEERQRQMDDK-------MRPDTGAVVVSPGDVNDGPATTADKALSALPYLLPLVDGILFAAHLFGAFPEQTAWAQ 288

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BLAST of mRNA_S-ischiensis_contig9.20658.1 vs. uniprot
Match: D8LS20_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS20_ECTSI)

HSP 1 Score: 171 bits (433), Expect = 1.670e-47
Identity = 107/226 (47.35%), Postives = 140/226 (61.95%), Query Frame = 0

Query:    4 SSPVDVQAERLREQASQLRAEAAALQSQMNEERQGAALRSFNTFDSNGDGQVDVVGLRTGLERALRRDFVKRLKARMGGVPPTARQVEAKIAEMPGGRLLPEEPLRQLLEAYDKNGDGVLQPEEFARTEAI-------FQKQREEKRLSRVAEWEKTRAEKEKAAKVEMARSLG--VALPEDFNDGAPTALDKAVSGLPYLLPLLDGLVFAGHLFSAYPEQFAWAQ 220
            S   + +A +LRE A+  RAEAA L+ +   ER+  A RSFNTFDSN DG VDV  L+ GLE  LRR F K L+ARMG   P+  +V+ +IA +PGG L P++   +L++ YD+NGDG+LQ  EFA TE +       F +QREE+R++R+        ++       M    G  V  P D NDG  T  DKA+S LPY+LPL DG+VFA HLF A+ EQ AWAQ
Sbjct:   71 SEVAEQRAAKLRETAAAFRAEAAELEQKQARERRENAQRSFNTFDSNKDGSVDVAELKAGLEGPLRRSFTKTLQARMGR-KPSKEEVDDRIAGLPGGTLFPDDLALKLIQTYDQNGDGLLQQSEFAPTEELRTRLENLFSQQREEERVARMEXXXXXXXDR-------MRPDAGTVVVSPGDVNDGPATTADKALSALPYVLPLADGVVFAAHLFGAFLEQTAWAQ 288

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BLAST of mRNA_S-ischiensis_contig9.20658.1 vs. uniprot
Match: D8LTM8_ECTSI (TIC 20 related, plastid import n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTM8_ECTSI)

HSP 1 Score: 166 bits (420), Expect = 3.000e-45
Identity = 98/217 (45.16%), Postives = 139/217 (64.06%), Query Frame = 0

Query:   11 AERLREQASQLRAEAAALQSQMNEERQGAALRSFNTFDSNGDGQVDVVGLRTGLERALRRDFVKRLKARMGGVPPTARQVEAKIAEMPGGRLLPEEPLRQLLEAYDKNGDGVLQPEEFA-------RTEAIFQKQREEKRLSRVAEWEKTRAEKEKAAKVEMARSLGVALPEDFNDGAPTALDKAVSGLPYLLPLLDGLVFAGHLFSAYPEQFAWAQ 220
            A +LR  A++LR +A  L+S+ + E+Q AA  +F++FD+N DG VDV  L  GLE  LR+DF+KR+   M   P  A +V+ +I+EMPGG LLP E  ++L+E+YD NGDGVLQP EFA       R +++F  + +E RL   A  E+    +      + A++ G+ALPEDFNDG PT  DK +S LPY LPL+D LVF  H+F  +P Q ++ +
Sbjct:   88 AAKLRAFAAELRLQAEELESKRDSEKQQAAQEAFDSFDTNDDGTVDVKELIAGLEGQLRKDFIKRMTKTMKRKPSPA-EVDERISEMPGGSLLPMELAQKLIESYDTNGDGVLQPSEFASKADMRVRLDSLFADRAQEARLEAAAAREREIENRGADKARQEAKARGLALPEDFNDGPPTITDKLLSVLPYTLPLMDSLVFGAHIFQTFPTQLSFLE 303

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BLAST of mRNA_S-ischiensis_contig9.20658.1 vs. uniprot
Match: A0A6H5JY95_9PHAE (EF-hand domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JY95_9PHAE)

HSP 1 Score: 141 bits (355), Expect = 5.070e-36
Identity = 83/186 (44.62%), Postives = 118/186 (63.44%), Query Frame = 0

Query:   42 RSFNTFDSNGDGQVDVVGLRTGLERALRRDFVKRLKARMGGVPPTARQVEAKIAEMPGGRLLPEEPLRQLLEAYDKNGDGVLQPEEFA-------RTEAIFQKQREEKRLSRVAEWEKTRAEKEKAAKVEMARSLGVALPEDFNDGAPTALDKAVSGLPYLLPLLDGLVFAGHLFSAYPEQFAWAQ 220
            RSF  FDSN DG V V  L+ GLE  L++ F K+L ARMG   PT  +VEAKI E+PG  L P++   +L++ YD+NGDGVLQ  EFA       R E+IF+++REE+  +R AE  K   + +   K +M  S+      D    + T+L+KA+  LPY+LPL DG+V+A H++S +P+Q AW++
Sbjct:  104 RSFAAFDSNKDGAVGVAELKAGLEGPLKKTFTKQLTARMGR-KPTPEEVEAKILELPGRALFPDDLAERLIKLYDQNGDGVLQQSEFAPTEELRARLESIFRERREEELEARQAE-RKREMDAKTTGKGKMLSSVA---DSDREAASATSLEKALCALPYILPLSDGIVYAQHIYSTFPQQMAWSE 284

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BLAST of mRNA_S-ischiensis_contig9.20658.1 vs. uniprot
Match: A0A6H5KKK9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKK9_9PHAE)

HSP 1 Score: 114 bits (285), Expect = 6.110e-28
Identity = 66/148 (44.59%), Postives = 88/148 (59.46%), Query Frame = 0

Query:   82 GVPPTARQVEAKIAEMPGGRLLPEEPLRQLLEAYDKNGDGVLQPEEFARTEAI-------FQKQREEKRLSRVAEWEKTRAEKEKAAKVEMARSLG--VALPEDFNDGAPTALDKAVSGLPYLLPLLDGLVFAGHLFSAYPEQFAWAQ 220
            G  P+ ++ + +IA +PGG L P+E   +L++ YD NG+G+LQ  EFA TE +       F +QREEKRL+R+ E       +++     M    G  V  P D NDG     D A+S LPYLLPL DG+VFA HLF  +PEQ AWAQ
Sbjct:    2 GRKPSKKEADERIAGLPGGTLFPDELALKLIQTYDHNGNGLLQQSEFAPTEELRTRLENLFSQQREEKRLARMEE-------RQRQMDDNMRPDAGAVVVSPGDVNDGLVNTADNALSALPYLLPLADGIVFAAHLFGVFPEQTAWAQ 142

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BLAST of mRNA_S-ischiensis_contig9.20658.1 vs. uniprot
Match: A0A6H5KCI4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCI4_9PHAE)

HSP 1 Score: 109 bits (273), Expect = 1.750e-25
Identity = 64/139 (46.04%), Postives = 83/139 (59.71%), Query Frame = 0

Query:   91 EAKIAEMPGGRLLPEEPLRQLLEAYDKNGDGVLQPEEFARTEAI-------FQKQREEKRLSRVAEWEKTRAEKEKAAKVEMARSLG--VALPEDFNDGAPTALDKAVSGLPYLLPLLDGLVFAGHLFSAYPEQFAWAQ 220
            + +IA +PGG L P+E   +L++ YD NG+G+LQ  EFA TE +       F +QREEKRL+R+ E       +++     M    G  V  P D NDG     D A+S LPYLLPL DG+VFA HLF  +PEQ AWAQ
Sbjct:   21 DERIAGLPGGTLFPDELALKLIQTYDHNGNGLLQQSEFAPTEELRTRLENLFSQQREEKRLARMEE-------RQRQMDDNMRPDAGAVVVSPGDVNDGLVNTADNALSALPYLLPLADGIVFAAHLFGVFPEQTAWAQ 152

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BLAST of mRNA_S-ischiensis_contig9.20658.1 vs. uniprot
Match: A0A6H5KUU9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUU9_9PHAE)

HSP 1 Score: 95.9 bits (237), Expect = 6.120e-20
Identity = 63/151 (41.72%), Postives = 85/151 (56.29%), Query Frame = 0

Query:   81 GGVPPTARQVEAKIAEMPGGRLLPEEPLRQ--LLEAYDKNGDGVLQPEEFARTEAI-------FQKQREEKRLSRVAEWEKTRAEKEK--AAKVEMARSLGVALPEDFNDGAPTALDKAVSGLPYLLPLLDGLVFAGHLFSAYPEQFAWAQ 220
            G  P T+R    ++        LP   ++   L+ +YD+NGDG+LQ  EFA TE +       F +QREE+R++R+         K +  A  VE++       P D NDG  T  DKA+S LPY+LPL DG+VFA HLF A+PEQ AWAQ
Sbjct:    8 GNAPKTSRIQRFRVRSSSKSCPLPARFVKAGVLVRSYDQNGDGLLQQSEFAPTEELRTRLENLFSQQREEERVARMEXXXXXXXXKMRPDAGAVEVS-------PGDVNDGPATTADKALSALPYVLPLADGVVFAAHLFGAFPEQTAWAQ 151

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BLAST of mRNA_S-ischiensis_contig9.20658.1 vs. uniprot
Match: B8BS98_THAPS (Plant like protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BS98_THAPS)

HSP 1 Score: 89.4 bits (220), Expect = 5.920e-17
Identity = 72/209 (34.45%), Postives = 110/209 (52.63%), Query Frame = 0

Query:    8 DVQAERLREQASQLRAEAAALQSQMNEERQGAALRSFNTFDSNGDGQVDVVGLRTGLERALRRDFVKRLKARMGGVPPTARQVEAKIAEMPGGRLLPEEPLRQLLEAYDKNGDGVLQPEEFARTEAIFQKQ-----REEKRLSRVAEWEKTRAEKEKAAKVEMARSLGVALPEDFNDGAPTALDKAVSGLPYLLPLLDGLVFAGHLFSA 211
            D + ERL++ A++LRAEAA+L++   ++   AA ++FN FD N DG+V +  L+ GLE+ L+ +                               + E+ +++L++ +DK+GDG LQ +EF   E  F+ Q     REEKRL+  A  + ++ EKE A        L  A  E  N+  PT  +K +S LPYL PL+DGL +   L SA
Sbjct:   63 DNEIERLKKMAAKLRAEAASLEADKAQQMAQAAQKAFNKFDINDDGEVSLSELKIGLEKELKTE-------------------------------ISEKRVKELMDVFDKSGDGALQLDEFVTVER-FRNQLEALAREEKRLAEEAA-KASKKEKELAL-------LAEAKLEFLNEKQPTGTEKIISILPYLFPLMDGLQYGRFLLSA 231

The following BLAST results are available for this feature:

BLAST of mRNA_S-ischiensis_contig9.20658.1 vs. uniprot

BLAST of mRNA_S-ischiensis_contig9.20658.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 17


Match Name	E-value	Identity	Description
A0A2I6U1M4_SACJA	1.890e-53	50.44	Tic20-like protein n=15 Tax=Saccharina japonica Ta...	[more]
D8LS19_ECTSI	7.400e-49	47.79	EF-hand domain-containing protein n=7 Tax=Ectocarp...	[more]
D7FRG5_ECTSI	1.500e-48	47.35	EF-hand domain-containing protein n=2 Tax=Ectocarp...	[more]
D8LS20_ECTSI	1.670e-47	47.35	EF-hand domain-containing protein n=1 Tax=Ectocarp...	[more]
D8LTM8_ECTSI	3.000e-45	45.16	TIC 20 related, plastid import n=2 Tax=Ectocarpus ...	[more]
A0A6H5JY95_9PHAE	5.070e-36	44.62	EF-hand domain-containing protein n=2 Tax=Ectocarp...	[more]
A0A6H5KKK9_9PHAE	6.110e-28	44.59	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KCI4_9PHAE	1.750e-25	46.04	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KUU9_9PHAE	6.120e-20	41.72	Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA...	[more]
B8BS98_THAPS	5.920e-17	34.45	Plant like protein n=1 Tax=Thalassiosira pseudonan...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 11..38
IPR002048	EF-hand domain	PFAM	PF13202	EF-hand_5	coord: 108..130 e-value: 3.3E-4 score: 20.0 coord: 42..56 e-value: 0.034 score: 13.6
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 35..70 score: 7.316
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 103..138 score: 9.074
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 116..128
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 25..136

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
S-ischiensis_contig9	contig	S-ischiensis_contig9:2339254..2340601 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Schizocladia ischiensis KU_0333	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_S-ischiensis_contig9.20658.1	mRNA_S-ischiensis_contig9.20658.1	Schizocladia ischiensis KU_0333	mRNA	S-ischiensis_contig9 2338927..2341510 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_S-ischiensis_contig9.20658.1 ID=prot_S-ischiensis_contig9.20658.1|Name=mRNA_S-ischiensis_contig9.20658.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=251bp
MAASSPVDVQAERLREQASQLRAEAAALQSQMNEERQGAALRSFNTFDSN
GDGQVDVVGLRTGLERALRRDFVKRLKARMGGVPPTARQVEAKIAEMPGG
RLLPEEPLRQLLEAYDKNGDGVLQPEEFARTEAIFQKQREEKRLSRVAEW
EKTRAEKEKAAKVEMARSLGVALPEDFNDGAPTALDKAVSGLPYLLPLLD
GLVFAGHLFSAYPEQFAWAQRSWPWSSTGPSPSRGSRLSSACSSWLVNPR
*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002048	EF_hand_dom
IPR018247	EF_Hand_1_Ca_BS
IPR011992	EF-hand-dom_pair