prot_S-ischiensis_contig9.20630.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_S-ischiensis_contig9.20630.1
Unique Name	prot_S-ischiensis_contig9.20630.1
Type	polypeptide
Organism	Schizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length	211

Homology

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BLAST of mRNA_S-ischiensis_contig9.20630.1 vs. uniprot
Match: D7G245_ECTSI (Rab18, RAB family GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G245_ECTSI)

HSP 1 Score: 363 bits (931), Expect = 5.830e-126
Identity = 178/210 (84.76%), Postives = 197/210 (93.81%), Query Frame = 0

Query:    1 MSMQKTEPYDHLFKILLVGDAAVGKSSIMLRFTDDTFDEHLQSTIGVDFKVKMMDAGGKRIKMTIWDTAGQERFRTLTSSYYRGAQGIMLVYDVTRPDTFDNLNKWLEEVETYHPGRGREVVKLLVGNKIDKDRVVTRAEAEAYARSKGMLFLEASAKTRVGIQQVFAEVVQKILENPALLANTAPGRPRTTINPAHAGAAGGGGGYCCG 210
            M+ ++ EPYDHLFK+LLVGDAAVGKSSIMLRFTDDTFD+HLQSTIGVDFKVKM+DAGGKRIKMTIWDTAGQERFRTLTSSYYRGAQGIMLVYDVTRP+TFDNL+KWLEEVETYHPGRGREVVKLLVGNK+DK+RVVTRA+AE YARSKGMLFLEASAKT+VG++QVF EVVQKIL+NP+LLANTAPGRPR T++P+       GGG CCG
Sbjct:    1 MTTRQAEPYDHLFKLLLVGDAAVGKSSIMLRFTDDTFDDHLQSTIGVDFKVKMVDAGGKRIKMTIWDTAGQERFRTLTSSYYRGAQGIMLVYDVTRPETFDNLSKWLEEVETYHPGRGREVVKLLVGNKVDKERVVTRAQAEEYARSKGMLFLEASAKTKVGVKQVFEEVVQKILDNPSLLANTAPGRPRDTVDPSRPNPNQAGGGLCCG 210

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BLAST of mRNA_S-ischiensis_contig9.20630.1 vs. uniprot
Match: A0A835YPZ0_9STRA (Rab18, rab family GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPZ0_9STRA)

HSP 1 Score: 319 bits (817), Expect = 1.270e-108
Identity = 157/184 (85.33%), Postives = 170/184 (92.39%), Query Frame = 0

Query:    8 PYDHLFKILLVGDAAVGKSSIMLRFTDDTFDEHLQSTIGVDFKVKMMDAGGKRIKMTIWDTAGQERFRTLTSSYYRGAQGIMLVYDVTRPDTFDNLNKWLEEVETYHPGRGREVVKLLVGNKIDKDRVVTRAEAEAYARSKGMLFLEASAKTRVGIQQVFAEVVQKILENPALLANTAPGRPRT 191
            PYDHLFKILL+GDAAVGKSSIMLRFTDD+FD+ LQSTIGVDFKVKMM+ G K+IKMTIWDTAGQERFRTLTSSYYRGAQGIMLVYDV RP+TFDNLNKWLEEVETYHPGRGR+VVKLLVGNK+D  R V R +AEA+ARSKGMLFLEASAKT VGI+Q F EVV KILE+PALLANT PG+PRT
Sbjct:    6 PYDHLFKILLIGDAAVGKSSIMLRFTDDSFDDKLQSTIGVDFKVKMMEVGDKKIKMTIWDTAGQERFRTLTSSYYRGAQGIMLVYDVERPETFDNLNKWLEEVETYHPGRGRDVVKLLVGNKVDCPRAVPREQAEAWARSKGMLFLEASAKTEVGIRQAFEEVVHKILESPALLANTTPGKPRT 189

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BLAST of mRNA_S-ischiensis_contig9.20630.1 vs. uniprot
Match: A0A4D9D7L4_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D7L4_9STRA)

HSP 1 Score: 312 bits (800), Expect = 4.740e-106
Identity = 156/209 (74.64%), Postives = 181/209 (86.60%), Query Frame = 0

Query:    1 MSMQKTEPYDHLFKILLVGDAAVGKSSIMLRFTDDTFDEHLQSTIGVDFKVKMMDAGGKRIKMTIWDTAGQERFRTLTSSYYRGAQGIMLVYDVTRPDTFDNLNKWLEEVETYHPGRGREVVKLLVGNKIDKDRVVTRAEAEAYARSKGMLFLEASAKTRVGIQQVFAEVVQKILENPALLANTAPGRPRTTINPAHAGAAGGGGGYCC 209
            M++++ EPYDHLFK+LL+GDA VGKSSI+LRFTDD FD+H QSTIGVDFKVKM++   KRIKMTIWDTAGQERFRTLTSSYYRGAQGI+LVYDV R ++F+NLN WL+EVE Y  G GRE+VK+LVGNK+DK+R+V R EAEA+ARSKGMLFLEASAKTR GI+QVF EVVQKIL+NP+LL NTAPGRPR  +N     AA G GGYCC
Sbjct:    1 MAVREPEPYDHLFKLLLIGDAGVGKSSILLRFTDDAFDDHQQSTIGVDFKVKMIEVDHKRIKMTIWDTAGQERFRTLTSSYYRGAQGIILVYDVNRRESFENLNHWLQEVEVYSTGGGREIVKVLVGNKVDKERMVPREEAEAWARSKGMLFLEASAKTRTGIRQVFLEVVQKILDNPSLLTNTAPGRPR--VNLQADAAAKGSGGYCC 207

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BLAST of mRNA_S-ischiensis_contig9.20630.1 vs. uniprot
Match: A0A067C8B0_SAPPC (Uncharacterized protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067C8B0_SAPPC)

HSP 1 Score: 304 bits (778), Expect = 1.220e-102
Identity = 156/215 (72.56%), Postives = 177/215 (82.33%), Query Frame = 0

Query:    1 MSMQKTEPYDHLFKILLVGDAAVGKSSIMLRFTDDTFDEHLQSTIGVDFKVKMMDAGGKRIKMTIWDTAGQERFRTLTSSYYRGAQGIMLVYDVTRPDTFDNLNKWLEEVETYHPGRGREVVKLLVGNKIDKDRVVTRAEAEAYARSKGMLFLEASAKTRVGIQQVFAEVVQKILENPALLANTAPGRPRTTINPA------HAGAAGGGGGYCC 209
            M  Q+ + YDHLFK+LLVGDA VGKSS++LRFTDDTFD+HLQSTIGVDFKVKMM   GKRIKMTIWDTAGQERFRTLTSSYYRGAQGI+LVYDV R +TF+NL  WL+EVE Y P  GR+VVKLLVGNKIDK+RVV+R E EA+ARSKGMLF+E+SAKT++GIQQVF EVVQKIL+NPALLANTAP      +N +      HA A GG    CC
Sbjct:    1 MDAQEVDSYDHLFKLLLVGDAGVGKSSMLLRFTDDTFDDHLQSTIGVDFKVKMMQVDGKRIKMTIWDTAGQERFRTLTSSYYRGAQGIILVYDVARKETFENLGTWLQEVEVYSPANGRDVVKLLVGNKIDKERVVSRQEGEAWARSKGMLFVESSAKTKIGIQQVFNEVVQKILDNPALLANTAPRSRAKKVNLSADKYAPHANAGGG----CC 211

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BLAST of mRNA_S-ischiensis_contig9.20630.1 vs. uniprot
Match: W7UBM5_9STRA (Rab family gtpase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7UBM5_9STRA)

HSP 1 Score: 305 bits (780), Expect = 1.380e-100
Identity = 147/193 (76.17%), Postives = 172/193 (89.12%), Query Frame = 0

Query:    1 MSMQKTEPYDHLFKILLVGDAAVGKSSIMLRFTDDTFDEHLQSTIGVDFKVKMMDAGGKRIKMTIWDTAGQERFRTLTSSYYRGAQGIMLVYDVTRPDTFDNLNKWLEEVETYHPGRGREVVKLLVGNKIDKDRVVTRAEAEAYARSKGMLFLEASAKTRVGIQQVFAEVVQKILENPALLANTAPGRPRTTI 193
            M++++ EPYDHLFK+LL+GDA VGKSSI+LRFTDD FD+H QSTIGVDFKVKM++   KRIKMTIWDTAGQERFRTLTSSYYRGAQGI+LVYDV R ++F+NLN WL+EVE Y  G GRE+VK+LVGNK+DK+R+V R EAEA+ARSKGMLFLEASAKTR GI+QVF EVVQKIL+NP+LL NTAPGRPR  +
Sbjct:   57 MAVREPEPYDHLFKLLLIGDAGVGKSSILLRFTDDAFDDHQQSTIGVDFKVKMIEVDHKRIKMTIWDTAGQERFRTLTSSYYRGAQGIILVYDVNRRESFENLNHWLQEVEVYSTGGGREIVKVLVGNKVDKERMVPREEAEAWARSKGMLFLEASAKTRTGIRQVFLEVVQKILDNPSLLTNTAPGRPRVNL 249

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BLAST of mRNA_S-ischiensis_contig9.20630.1 vs. uniprot
Match: D0NMU9_PHYIT (Rab18 family GTPase, putative n=6 Tax=Oomycota TaxID=4762 RepID=D0NMU9_PHYIT)

HSP 1 Score: 297 bits (761), Expect = 3.460e-100
Identity = 153/200 (76.50%), Postives = 174/200 (87.00%), Query Frame = 0

Query:    9 YDHLFKILLVGDAAVGKSSIMLRFTDDTFDEHLQSTIGVDFKVKMMDAGGKRIKMTIWDTAGQERFRTLTSSYYRGAQGIMLVYDVTRPDTFDNLNKWLEEVETYHPGRGREVVKLLVGNKIDKDRVVTRAEAEAYARSKGMLFLEASAKTRVGIQQVFAEVVQKILENPALLANTAPGRPRTTINPAHAGAAGGGGGYC 208
            YDHLFK+LL+GDA VGKSS++LRFTDDTFD++LQSTIGVDFKVKMM   GK+IKMTIWDTAGQERFRTLTSSYYRGAQGI+LVYDV R DTF+NL+ WL+EVE Y P  GR+VVKLLVGNKIDK+RVV+R EAE +ARSKGMLF+E+SAKT++GIQQVF EVVQKILENPALL+NTAP R R     A A  +GGG G C
Sbjct:    4 YDHLFKLLLIGDAGVGKSSMLLRFTDDTFDDNLQSTIGVDFKVKMMQVDGKKIKMTIWDTAGQERFRTLTSSYYRGAQGIVLVYDVARRDTFENLDLWLQEVEVYSPAGGRDVVKLLVGNKIDKERVVSRREAEDWARSKGMLFVESSAKTKIGIQQVFNEVVQKILENPALLSNTAP-RSRGRKLDAKAEKSGGGNGCC 202

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BLAST of mRNA_S-ischiensis_contig9.20630.1 vs. uniprot
Match: K3WMM1_GLOUD (Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WMM1_GLOUD)

HSP 1 Score: 296 bits (759), Expect = 7.210e-100
Identity = 153/205 (74.63%), Postives = 174/205 (84.88%), Query Frame = 0

Query:    7 EPYDHLFKILLVGDAAVGKSSIMLRFTDDTFDEHLQSTIGVDFKVKMMDAGGKRIKMTIWDTAGQERFRTLTSSYYRGAQGIMLVYDVTRPDTFDNLNKWLEEVETYHPGRGREVVKLLVGNKIDKDRVVTRAEAEAYARSKGMLFLEASAKTRVGIQQVFAEVVQKILENPALLANTAPGRPRTTINPAHAGAAG--GGGGYCC 209
            + YDHLFK+LL+GDA VGKSS++LRFTDDTFD++LQSTIGVDFKVKMM   GKRIKMTIWDTAGQERFRTLTSSYYRGAQGI+LVYDV R DTF+NL+ WL+EVE Y P  G++VVKLLVGNKIDK+RVV+R EAE +ARSKGMLF+E+SAKT++GIQQVF EVVQKILENPALL  T   RPRT      +G  G  GGGG CC
Sbjct:    2 DKYDHLFKLLLIGDAGVGKSSMLLRFTDDTFDDNLQSTIGVDFKVKMMQVDGKRIKMTIWDTAGQERFRTLTSSYYRGAQGIVLVYDVARRDTFENLDLWLQEVEVYSPAGGKDVVKLLVGNKIDKERVVSRREAEDWARSKGMLFVESSAKTKIGIQQVFNEVVQKILENPALLGTT---RPRTNDRATLSGKDGKSGGGGGCC 203

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BLAST of mRNA_S-ischiensis_contig9.20630.1 vs. uniprot
Match: A0A6A3N672_9STRA (Uncharacterized protein n=21 Tax=Peronosporaceae TaxID=4777 RepID=A0A6A3N672_9STRA)

HSP 1 Score: 295 bits (756), Expect = 7.850e-99
Identity = 152/200 (76.00%), Postives = 173/200 (86.50%), Query Frame = 0

Query:    9 YDHLFKILLVGDAAVGKSSIMLRFTDDTFDEHLQSTIGVDFKVKMMDAGGKRIKMTIWDTAGQERFRTLTSSYYRGAQGIMLVYDVTRPDTFDNLNKWLEEVETYHPGRGREVVKLLVGNKIDKDRVVTRAEAEAYARSKGMLFLEASAKTRVGIQQVFAEVVQKILENPALLANTAPGRPRTTINPAHAGAAGGGGGYC 208
            YDHLFK+LL+GDA VGKSS++LRFTDDTFD++LQSTIGVDFKVKMM   GK+IKMTIWDTAGQERFRTLTSSYYRGAQGI+LVYDV R DTF+NL+ WL+EVE Y P  GR+VVKLLVGNKIDK+RVV+R EAE +ARSKGMLF+E+SAKT++GIQQVF EVVQKILENPALL+NTAP R R       A  +GGG G C
Sbjct:   44 YDHLFKLLLIGDAGVGKSSMLLRFTDDTFDDNLQSTIGVDFKVKMMQVDGKKIKMTIWDTAGQERFRTLTSSYYRGAQGIVLVYDVARRDTFENLDLWLQEVEVYSPAGGRDVVKLLVGNKIDKERVVSRREAEDWARSKGMLFVESSAKTKIGIQQVFNEVVQKILENPALLSNTAP-RNRGRKLDGKAEKSGGGSGCC 242

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BLAST of mRNA_S-ischiensis_contig9.20630.1 vs. uniprot
Match: A0A6G0KMK3_9STRA (Uncharacterized protein n=4 Tax=Peronosporaceae TaxID=4777 RepID=A0A6G0KMK3_9STRA)

HSP 1 Score: 295 bits (756), Expect = 1.400e-98
Identity = 152/200 (76.00%), Postives = 173/200 (86.50%), Query Frame = 0

Query:    9 YDHLFKILLVGDAAVGKSSIMLRFTDDTFDEHLQSTIGVDFKVKMMDAGGKRIKMTIWDTAGQERFRTLTSSYYRGAQGIMLVYDVTRPDTFDNLNKWLEEVETYHPGRGREVVKLLVGNKIDKDRVVTRAEAEAYARSKGMLFLEASAKTRVGIQQVFAEVVQKILENPALLANTAPGRPRTTINPAHAGAAGGGGGYC 208
            YDHLFK+LL+GDA VGKSS++LRFTDDTFD++LQSTIGVDFKVKMM   GK+IKMTIWDTAGQERFRTLTSSYYRGAQGI+LVYDV R DTF+NL+ WL+EVE Y P  GR+VVKLLVGNKIDK+RVV+R EAE +ARSKGMLF+E+SAKT++GIQQVF EVVQKILENPALL+NTAP R R       A  +GGG G C
Sbjct:   61 YDHLFKLLLIGDAGVGKSSMLLRFTDDTFDDNLQSTIGVDFKVKMMQVDGKKIKMTIWDTAGQERFRTLTSSYYRGAQGIVLVYDVARRDTFENLDLWLQEVEVYSPAGGRDVVKLLVGNKIDKERVVSRREAEDWARSKGMLFVESSAKTKIGIQQVFNEVVQKILENPALLSNTAP-RNRGRKLDGKAEKSGGGSGCC 259

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BLAST of mRNA_S-ischiensis_contig9.20630.1 vs. uniprot
Match: A0A485LUC0_9STRA (Aste57867_25090 protein n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A485LUC0_9STRA)

HSP 1 Score: 292 bits (748), Expect = 4.190e-98
Identity = 142/186 (76.34%), Postives = 164/186 (88.17%), Query Frame = 0

Query:    1 MSMQKTEPYDHLFKILLVGDAAVGKSSIMLRFTDDTFDEHLQSTIGVDFKVKMMDAGGKRIKMTIWDTAGQERFRTLTSSYYRGAQGIMLVYDVTRPDTFDNLNKWLEEVETYHPGRGREVVKLLVGNKIDKDRVVTRAEAEAYARSKGMLFLEASAKTRVGIQQVFAEVVQKILENPALLANTAP 186
            M     E YDHLFK+LLVGDA VGKSS++LRFT+DTFD+HLQSTIGVDFKVKM+   GKRIKMTIWDTAGQERFRTLTSSYYRGAQGI+LVYDV R DTF+NL+ WL+EV+ Y P  GR+VVKLLVGNKIDK+R V+R E EA+AR+KGMLF+E+SAKT+ GIQQVF EVVQKIL+NP+LL+NTAP
Sbjct:    1 MEQSAVESYDHLFKLLLVGDAGVGKSSMLLRFTEDTFDDHLQSTIGVDFKVKMITVDGKRIKMTIWDTAGQERFRTLTSSYYRGAQGIVLVYDVARRDTFENLDTWLQEVQVYSPANGRDVVKLLVGNKIDKERAVSRKEGEAWARTKGMLFVESSAKTKTGIQQVFNEVVQKILDNPSLLSNTAP 186

The following BLAST results are available for this feature:

BLAST of mRNA_S-ischiensis_contig9.20630.1 vs. uniprot

BLAST of mRNA_S-ischiensis_contig9.20630.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G245_ECTSI	5.830e-126	84.76	Rab18, RAB family GTPase n=2 Tax=Ectocarpus TaxID=...	[more]
A0A835YPZ0_9STRA	1.270e-108	85.33	Rab18, rab family GTPase n=1 Tax=Tribonema minus T...	[more]
A0A4D9D7L4_9STRA	4.740e-106	74.64	Uncharacterized protein n=2 Tax=Monodopsidaceae Ta...	[more]
A0A067C8B0_SAPPC	1.220e-102	72.56	Uncharacterized protein n=4 Tax=Saprolegniaceae Ta...	[more]
W7UBM5_9STRA	1.380e-100	76.17	Rab family gtpase n=1 Tax=Nannochloropsis gaditana...	[more]
D0NMU9_PHYIT	3.460e-100	76.50	Rab18 family GTPase, putative n=6 Tax=Oomycota Tax...	[more]
K3WMM1_GLOUD	7.210e-100	74.63	Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4...	[more]
A0A6A3N672_9STRA	7.850e-99	76.00	Uncharacterized protein n=21 Tax=Peronosporaceae T...	[more]
A0A6G0KMK3_9STRA	1.400e-98	76.00	Uncharacterized protein n=4 Tax=Peronosporaceae Ta...	[more]
A0A485LUC0_9STRA	4.190e-98	76.34	Aste57867_25090 protein n=2 Tax=Aphanomyces TaxID=...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 152..174 score: 34.83 coord: 54..76 score: 47.62 coord: 36..52 score: 33.83 coord: 119..132 score: 45.45 coord: 13..34 score: 46.01
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 13..177 e-value: 2.2E-93 score: 326.2
None	No IPR available	SMART	SM00174	rho_sub_3	coord: 15..177 e-value: 3.9E-14 score: 60.6
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 10..177 e-value: 1.9E-18 score: 77.3
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 18..207 e-value: 3.1E-5 score: 25.1
None	No IPR available	SMART	SM00177	arf_sub_2	coord: 1..189 e-value: 0.0041 score: 0.3
None	No IPR available	GENE3D	3.40.50.300		coord: 1..184 e-value: 1.1E-63 score: 216.0
None	No IPR available	PANTHER	PTHR24073:SF1064		coord: 7..197
None	No IPR available	PANTHER	PTHR24073	FAMILY NOT NAMED	coord: 7..197
None	No IPR available	PROSITE	PS51419	RAB	coord: 8..209 score: 33.973
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 14..175 e-value: 3.9E-57 score: 192.4
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 13..170 e-value: 3.0E-27 score: 93.3
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 7..181

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
S-ischiensis_contig9	contig	S-ischiensis_contig9:2053180..2060552 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Schizocladia ischiensis KU_0333	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_S-ischiensis_contig9.20630.1	mRNA_S-ischiensis_contig9.20630.1	Schizocladia ischiensis KU_0333	mRNA	S-ischiensis_contig9 2052794..2060758 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_S-ischiensis_contig9.20630.1 ID=prot_S-ischiensis_contig9.20630.1|Name=mRNA_S-ischiensis_contig9.20630.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=211bp
MSMQKTEPYDHLFKILLVGDAAVGKSSIMLRFTDDTFDEHLQSTIGVDFK
VKMMDAGGKRIKMTIWDTAGQERFRTLTSSYYRGAQGIMLVYDVTRPDTF
DNLNKWLEEVETYHPGRGREVVKLLVGNKIDKDRVVTRAEAEAYARSKGM
LFLEASAKTRVGIQQVFAEVVQKILENPALLANTAPGRPRTTINPAHAGA
AGGGGGYCCG*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001806	Small_GTPase
IPR005225	Small_GTP-bd_dom
IPR027417	P-loop_NTPase