mRNA_S-ischiensis_contig9.20610.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig9.20610.1
Unique NamemRNA_S-ischiensis_contig9.20610.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
[Close]
BLAST of mRNA_S-ischiensis_contig9.20610.1 vs. uniprot
Match: A0A0U9HTE9_KLENI (Indole-3-acetic acid-amido synthetase-like n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A0U9HTE9_KLENI)

HSP 1 Score: 144 bits (362), Expect = 5.250e-32
Identity = 78/201 (38.81%), Postives = 121/201 (60.20%), Query Frame = 1 
Query:    1 HELEEGKSYEVIMTTFGGLYRYRMKDVVRVSGFDKLTPRVQFLYRRGAL-LNVHAERTSEKMLSDALGEALQGQG--NISLVEYSTDVDASALPPRYDVYCELVHTGGSGGEGGVAEEISDD---ELGKLASAMEAALLPRNRTYARDRSEGYIGPLHVVRVEAGTFDKYWRYVIEDLGGDPSQFKLPRCINNDKMRAIIR 585
            HELE G+ YEV++T + GLYRYR++DV++V GF +  P+V F YRRG L +    E  +EK L+ A+ E  +G       LVEY+T VD   +PPRY V+ E+V          + ++ SD+   +L  LA++++AAL  RN  Y     +  + PL V  V+  TF++ +RY +++ G D  Q+K+PRCI + ++R I +
Sbjct:  469 HELELGRCYEVVLTNWAGLYRYRLEDVIKVEGFLQSLPQVSFQYRRGVLSIQGATEHMTEKDLTGAVLETAEGLALTGRQLVEYTTAVDTGCVPPRYTVFAEIVR---------LRKDASDNVKLDLESLAASLDAALSRRNSLYENSIKKHELSPLEVCLVKPSTFEELFRYRVKEHGIDAGQYKVPRCIKSQELREIFK 660
[Close]
BLAST of mRNA_S-ischiensis_contig9.20610.1 vs. uniprot
Match: A0A022QCB6_ERYGU (Uncharacterized protein (Fragment) n=2 Tax=Erythranthe guttata TaxID=4155 RepID=A0A022QCB6_ERYGU)

HSP 1 Score: 126 bits (316), Expect = 2.110e-29
Identity = 73/201 (36.32%), Postives = 117/201 (58.21%), Query Frame = 1 
Query:    4 ELEEGKSYEVIMTTFGGLYRYRMKDVVRVSGFDKLTPRVQFLYRRGALLNVHAERTSEKMLSDALGEA--LQGQGNISLVEYSTDVDASALPPRYDVYCELVHTGGSGGEGGVAEEISDDELGKLASAMEAALLPRNRTYARDRSEGYIGPLHVVRVEAGTFDKYWRYVIEDLGGDPSQFKLPRCINNDKMRAIIRDGVAA 600
            ++E GK YEV++T   GLYRYRM DV++V+GF   +P++QF+ R+  LLN+  E+T+E  L +A+G A  L  +   S+V+Y++  D S +P  Y +Y EL        +  + E++ +  + +   AME +L P    Y   R +G IGPL +  V++GTF++   Y I   GG   Q+K+PRC++   +  I+   V A
Sbjct:    1 DVEIGKEYEVVITNSSGLYRYRMGDVLKVTGFHHKSPKLQFVRRKNVLLNIDWEKTNEVDLQEAVGHAAELLRKFGTSVVDYTSYADTSTIPGHYVIYWEL--------QASLKEDLCEKVIEQCCIAMEESLNP---IYRLLRVDGSIGPLEIRVVKSGTFEELMNYAISK-GGSIGQYKVPRCVSFKPIVDILDSRVLA 189
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BLAST of mRNA_S-ischiensis_contig9.20610.1 vs. uniprot
Match: UPI001EF5C578 (GH3 auxin-responsive promoter family protein n=2 Tax=Archangium violaceum TaxID=83451 RepID=UPI001EF5C578)

HSP 1 Score: 128 bits (321), Expect = 3.120e-27
Identity = 79/194 (40.72%), Postives = 112/194 (57.73%), Query Frame = 1 
Query:    4 ELEEGKSYEVIMTTFGGLYRYRMKDVVRVSGFDKLTPRVQFLYRRGALLNVHAERTSEKMLSDALGEALQGQGNISLVEYSTDVDASALPPRYDVYCELVHTGGSGGEGGVAEEISDDELGKLASAMEAALLPRNRTYARDRSEGYIGPLHVVRVEAGTFDKYWRYVIEDLGGDPSQFKLPRCINNDKMRAIIR 585
            +L EG+SYE+++TT  GLYRYR+ DVVR+ G     P ++FLYRRG+LLN+  E+TSE+  S AL EAL  QG +   +YS   +  ALP RY  + EL        +G V  ++   +  +L+ A+EAAL   N  Y   R    +G   +  V  GTF    R V+   GG PSQ K+PR + + +MR ++R
Sbjct:  376 QLVEGESYELVLTTRAGLYRYRLGDVVRMVGRYHQAPLLEFLYRRGSLLNLMGEKTSEQAASQALQEALATQGLLP-GDYSAVEETDALPGRYAFFVEL--------QGAVGPQV---DTARLSQALEAALCRTNPFYELIRRSERLGAATLHPVTPGTFQAL-RNVLIQRGGAPSQVKVPRVVRDAEMRELLR 556
[Close]
BLAST of mRNA_S-ischiensis_contig9.20610.1 vs. uniprot
Match: A0A0U9HLX3_KLENI (Auxin-responsive GH3 family protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A0U9HLX3_KLENI)

HSP 1 Score: 124 bits (310), Expect = 7.890e-27
Identity = 75/198 (37.88%), Postives = 115/198 (58.08%), Query Frame = 1 
Query:    1 HELEEGKSYEVIMTTFGGLYRYRMKDVVRVSGFDKLTPRVQFLYRRGAL-LNVHAERTSEKMLSDALGEALQGQGNIS--LVEYSTDVDASALPPRYDVYCELVHTGGSGGEGGVAEEISDDELGKLASAMEAALLPRNRTYARDRSEGYIGPLHVVRVEAGTFDKYWRYVIEDLGGDPSQFKLPRCINNDKMRAIIR 585
            HELEE +SYE+++T   GLYRY ++DVV+V+GF    P+VQ+ YRRG L +    E+ +EK L+ A+GE  +     S  +++Y+  +D  A P RY V+ E+     +G E  V EEI    LG  A A +A+L  +N  Y   R    IG   +  V+ G FD++  + +E  G D +Q+K+PRC+   + +A+ R
Sbjct:  180 HELEEARSYELVLTNVSGLYRYGLEDVVKVTGFWHGLPQVQYEYRRGMLTITAKPEKVTEKDLAVAIGEMEKWLPAESGRVLDYTVAIDTEADPERYSVFVEV-----NGNEETVMEEI----LGACADAFDASL-QKNPDYVHYRLRAQIGTAEICLVKRGAFDEFRAWKVEK-GTDTAQYKVPRCLKTPEQQAVFR 366
[Close]
BLAST of mRNA_S-ischiensis_contig9.20610.1 vs. uniprot
Match: A0A6A4QLH1_LUPAL (Putative GH3 family protein n=1 Tax=Lupinus albus TaxID=3870 RepID=A0A6A4QLH1_LUPAL)

HSP 1 Score: 120 bits (300), Expect = 1.270e-26
Identity = 67/188 (35.64%), Postives = 108/188 (57.45%), Query Frame = 1 
Query:    4 ELEEGKSYEVIMTTFGGLYRYRMKDVVRVSGFDKLTPRVQFLYRRGALLNVHAERTSEKMLSDAL--GEALQGQGNISLVEYSTDVDASALPPRYDVYCELVHTGGSGGEGGVAEEISDDELGKLASAMEAALLPRNRTYARDR-SEGYIGPLHVVRVEAGTFDKYWRYVIEDLGGDPSQFKLPRCIN 558
            ++E GK YE+++TT+ GLYRYR+ D +R++GF    P+  F+ R+  LLN+ +++T+E  L  A+  G  L  + N S+VEY++  D   +P  Y +Y EL+  G S         +S D L +    ME +L   N  Y + R ++  IGPL +  V+ GTF++   Y +   G   +Q+K+PRC+N
Sbjct:   60 DVEVGKEYELVITTYAGLYRYRVGDNLRITGFHNSAPQFHFVRRKNGLLNIDSDKTNESELQIAVENGSKLLAKFNTSVVEYTSHADTKTIPGHYVIYWELLTKGSS-------NSLSHDVLNQCCLEMEESL---NSVYRQCRVADHSIGPLEIRVVKGGTFEELMDYAMS-RGASINQYKVPRCVN 236
[Close]
BLAST of mRNA_S-ischiensis_contig9.20610.1 vs. uniprot
Match: A0A068TPG8_COFCA (Uncharacterized protein n=1 Tax=Coffea canephora TaxID=49390 RepID=A0A068TPG8_COFCA)

HSP 1 Score: 119 bits (298), Expect = 1.300e-26
Identity = 68/188 (36.17%), Postives = 110/188 (58.51%), Query Frame = 1 
Query:    4 ELEEGKSYEVIMTTFGGLYRYRMKDVVRVSGFDKLTPRVQFLYRRGALLNVHAERTSEKMLSDALGEALQ--GQGNISLVEYSTDVDASALPPRYDVYCELVHTGGSGGEGGVAEEISDDELGKLASAMEAALLPRNRTYARDR-SEGYIGPLHVVRVEAGTFDKYWRYVIEDLGGDPSQFKLPRCIN 558
            ++E GK YE+++TT+ GLYRYR+ D++RV+GF    P+ +F+ R+  LL++ +++T E  L  A+  A Q   + N S+VEY++  DA  +P  Y +Y EL+           A   SD+ L     AME +L   N  Y + R ++  IGPL +  V++GTF++   Y I   G   +Q+K+PRC++
Sbjct:   29 DVEIGKEYELVITTYAGLYRYRVGDILRVTGFHNSAPQFRFVRRKNVLLSIDSDKTDEAELQKAVENASQLLREYNTSVVEYTSFADAKTIPGHYVIYWELLVKD-------AAHSPSDEALNGCCLAMEESL---NSVYRQGRVADNSIGPLEIRVVKSGTFEELMDYAIS-RGASINQYKVPRCVS 205
[Close]
BLAST of mRNA_S-ischiensis_contig9.20610.1 vs. uniprot
Match: A0A7J9JBN0_9ROSI (Uncharacterized protein n=3 Tax=Gossypium TaxID=3633 RepID=A0A7J9JBN0_9ROSI)

HSP 1 Score: 118 bits (295), Expect = 1.950e-26
Identity = 71/202 (35.15%), Postives = 114/202 (56.44%), Query Frame = 1 
Query:    4 ELEEGKSYEVIMTTFGGLYRYRMKDVVRVSGFDKLTPRVQFLYRRGALLNVHAERTSEKMLSDALGEA--LQGQGNISLVEYSTDVDASALPPRYDVYCELVHTGGSGGEGGVAEEISDDELGKLASAMEAALLPRNRTYARDRSEGYIGPLHVVRVEAGTFDKYWRYVIEDLGGDPSQFKLPRCIN--NDKMRAIIRDGVA 597
            E++ G+ YEVI+T+F GLYRYR+ DVV+V GF   TP ++F+ RR  +L ++ ++ +EK L  A+ EA  L  +    ++++S++VD SA P  Y ++ E+            + E+SD+ L +  + ++ + +     Y   R    IGPL +  V  GTF K   + +  LG   SQFK PRC+   N+K+  I+ D VA
Sbjct:   21 EVKVGEEYEVIITSFAGLYRYRLGDVVKVMGFHNSTPELKFVCRRNLMLTINIDKNTEKDLQLAVEEAAKLIAEEKREVIDFSSNVDVSADPGHYVIFWEI------------SGEVSDEVLKECCNCLDRSFVDAG--YVSSRKVNAIGPLELRVVRKGTFHKILDHYL-GLGAVVSQFKTPRCVGPTNNKVLQILCDNVA 207
[Close]
BLAST of mRNA_S-ischiensis_contig9.20610.1 vs. uniprot
Match: A0A7J9JBJ7_9ROSI (Uncharacterized protein n=2 Tax=Gossypium TaxID=3633 RepID=A0A7J9JBJ7_9ROSI)

HSP 1 Score: 117 bits (292), Expect = 4.910e-26
Identity = 69/202 (34.16%), Postives = 114/202 (56.44%), Query Frame = 1 
Query:    4 ELEEGKSYEVIMTTFGGLYRYRMKDVVRVSGFDKLTPRVQFLYRRGALLNVHAERTSEKMLSDALGEA--LQGQGNISLVEYSTDVDASALPPRYDVYCELVHTGGSGGEGGVAEEISDDELGKLASAMEAALLPRNRTYARDRSEGYIGPLHVVRVEAGTFDKYWRYVIEDLGGDPSQFKLPRCIN--NDKMRAIIRDGVA 597
            E+  G+ YEVI+T FGGLYRY++ DVV+V GF   TP ++F+ RR  +L ++ ++++E+ L  A+ EA  L  +  + ++++S++VD S  P  Y ++ E+            + E+SD+ L +  + ++ + +     Y   R    IGPL +  V  GTF K   + +  LG   SQFK PRC+   N+K+  I+ D VA
Sbjct:   21 EVRVGEEYEVIITNFGGLYRYKLGDVVKVMGFHNSTPELKFVCRRNVMLAINIDKSTEQDLQFAVEEAAKLISKKKLEVIDFSSNVDVSTDPGHYVIFWEI------------SGEVSDEVLTECCNCLDRSFVDGG--YVSSRKVDAIGPLELRVVRRGTFQKILDHYL-GLGAALSQFKTPRCVGPTNNKVLQILCDNVA 207
[Close]
BLAST of mRNA_S-ischiensis_contig9.20610.1 vs. uniprot
Match: A0A6I9S8V0_ELAGV (probable indole-3-acetic acid-amido synthetase GH3.8 n=1 Tax=Elaeis guineensis var. tenera TaxID=51953 RepID=A0A6I9S8V0_ELAGV)

HSP 1 Score: 117 bits (293), Expect = 8.740e-26
Identity = 71/189 (37.57%), Postives = 107/189 (56.61%), Query Frame = 1 
Query:    7 LEEGKSYEVIMTTFGGLYRYRMKDVVRVSGFDKLTPRVQFLYRRGALLNVHAERTSEKMLSDALGEA--LQGQGNISLVEYSTDVDASALPPRYDVYCELVHTGGSGG--EGGVAEEISDDELGKLASAMEAALLPRNRTYARDR-SEGYIGPLHVVRVEAGTFDKYWRYVIEDLGGDPSQFKLPRCIN 558
            LE GK YE+++TT+ GLYRYR+ D++RV+GF    P+ +F+ R+  LL++ A++T E  L  A+  A  L    N ++VEY++      +P  Y +Y EL+  G + G   GG   E       +   AME AL   N  Y + R ++G IGPL +  V  GTF++   Y I   G   +Q+K+PRC+N
Sbjct:   43 LEVGKEYELVITTYAGLYRYRVGDILRVTGFHNAAPQFRFVRRKNVLLSIEADKTDEAELQKAVENASRLLEPYNATVVEYTSHAFTKTIPGHYVIYWELLVKGSTQGMMPGGEVME-------RCCLAMEEAL---NTVYRQSRVADGSIGPLEIRVVRGGTFEELMDYAIS-RGASINQYKVPRCVN 220
[Close]
BLAST of mRNA_S-ischiensis_contig9.20610.1 vs. uniprot
Match: A0A022RTA9_ERYGU (Uncharacterized protein n=1 Tax=Erythranthe guttata TaxID=4155 RepID=A0A022RTA9_ERYGU)

HSP 1 Score: 124 bits (310), Expect = 8.800e-26
Identity = 73/201 (36.32%), Postives = 116/201 (57.71%), Query Frame = 1 
Query:    4 ELEEGKSYEVIMTTFGGLYRYRMKDVVRVSGFDKLTPRVQFLYRRGALLNVHAERTSEKMLSDALGEA--LQGQGNISLVEYSTDVDASALPPRYDVYCELVHTGGSGGEGGVAEEISDDELGKLASAMEAALLPRNRTYARDRSEGYIGPLHVVRVEAGTFDKYWRYVIEDLGGDPSQFKLPRCINNDKMRAIIRDGVAA 600
            ++E GK YEV++T   GLYRYRM DV++V+GF   +P++QF+ R+  LLN+  E+T+E  L +A+G A  L  +   S+V+Y++  D S +P  Y +Y EL        +  + E+  +  + +   AME +L P    Y   R +G IGPL +  V++GTF++   Y I   GG   Q+K+PRC++   +  I+   V A
Sbjct:  387 DVEIGKEYEVVITNSSGLYRYRMGDVLKVTGFHHKSPKLQFVRRKNMLLNIDWEKTNEVDLQEAVGHAAKLLREFGTSVVDYTSYADTSTIPGHYVIYWEL--------QAPLKEDSCEKVIEQCCIAMEESLNP---IYRLLRVDGSIGPLEIRVVKSGTFEELMNYAISK-GGSIGQYKVPRCVSFKPIVDILDSRVLA 575
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig9.20610.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0U9HTE9_KLENI5.250e-3238.81Indole-3-acetic acid-amido synthetase-like n=1 Tax... [more]
A0A022QCB6_ERYGU2.110e-2936.32Uncharacterized protein (Fragment) n=2 Tax=Erythra... [more]
UPI001EF5C5783.120e-2740.72GH3 auxin-responsive promoter family protein n=2 T... [more]
A0A0U9HLX3_KLENI7.890e-2737.88Auxin-responsive GH3 family protein n=1 Tax=Klebso... [more]
A0A6A4QLH1_LUPAL1.270e-2635.64Putative GH3 family protein n=1 Tax=Lupinus albus ... [more]
A0A068TPG8_COFCA1.300e-2636.17Uncharacterized protein n=1 Tax=Coffea canephora T... [more]
A0A7J9JBN0_9ROSI1.950e-2635.15Uncharacterized protein n=3 Tax=Gossypium TaxID=36... [more]
A0A7J9JBJ7_9ROSI4.910e-2634.16Uncharacterized protein n=2 Tax=Gossypium TaxID=36... [more]
A0A6I9S8V0_ELAGV8.740e-2637.57probable indole-3-acetic acid-amido synthetase GH3... [more]
A0A022RTA9_ERYGU8.800e-2636.32Uncharacterized protein n=1 Tax=Erythranthe guttat... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig9contigS-ischiensis_contig9:1918378..1926706 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score113.6
Seed ortholog evalue1e-22
Seed eggNOG ortholog4155.Migut.O00418.1.p
KEGG koko:K14487
KEGG Pathwayko04075,map04075
GOsGO:0008150,GO:0009314,GO:0009416,GO:0009628,GO:0009719,GO:0009725,GO:0009733,GO:0010033,GO:0042221,GO:0050896
EggNOG free text desc.GH3 auxin-responsive promoter
EggNOG OGs2CMPM@1,2QR80@2759,37PYK@33090,3G8VB@35493,44E49@71274
COG Functional cat.S
Best tax levelasterids
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001
Hectar predicted targeting categoryother localisation
Exons5
Model size2429
Cds size582
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817389.4062297-UTR-S-ischiensis_contig9:1918377..19201881622817389.4062297-UTR-S-ischiensis_contig9:1918377..1920188Schizocladia ischiensis KU_0333UTRS-ischiensis_contig9 1918378..1920188 -
1695741077.311849-UTR-S-ischiensis_contig9:1918377..19201881695741077.311849-UTR-S-ischiensis_contig9:1918377..1920188Schizocladia ischiensis KU_0333UTRS-ischiensis_contig9 1918378..1920188 -
1622817389.4717197-UTR-S-ischiensis_contig9:1926670..19267061622817389.4717197-UTR-S-ischiensis_contig9:1926670..1926706Schizocladia ischiensis KU_0333UTRS-ischiensis_contig9 1926671..1926706 -
1695741077.3774927-UTR-S-ischiensis_contig9:1926670..19267061695741077.3774927-UTR-S-ischiensis_contig9:1926670..1926706Schizocladia ischiensis KU_0333UTRS-ischiensis_contig9 1926671..1926706 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817389.417195-CDS-S-ischiensis_contig9:1920188..19202961622817389.417195-CDS-S-ischiensis_contig9:1920188..1920296Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 1920189..1920296 -
1695741077.3257446-CDS-S-ischiensis_contig9:1920188..19202961695741077.3257446-CDS-S-ischiensis_contig9:1920188..1920296Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 1920189..1920296 -
1622817389.427718-CDS-S-ischiensis_contig9:1922503..19226711622817389.427718-CDS-S-ischiensis_contig9:1922503..1922671Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 1922504..1922671 -
1695741077.3368533-CDS-S-ischiensis_contig9:1922503..19226711695741077.3368533-CDS-S-ischiensis_contig9:1922503..1922671Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 1922504..1922671 -
1622817389.4383166-CDS-S-ischiensis_contig9:1924766..19248951622817389.4383166-CDS-S-ischiensis_contig9:1924766..1924895Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 1924767..1924895 -
1695741077.3479788-CDS-S-ischiensis_contig9:1924766..19248951695741077.3479788-CDS-S-ischiensis_contig9:1924766..1924895Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 1924767..1924895 -
1622817389.4487875-CDS-S-ischiensis_contig9:1925711..19258561622817389.4487875-CDS-S-ischiensis_contig9:1925711..1925856Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 1925712..1925856 -
1695741077.3588946-CDS-S-ischiensis_contig9:1925711..19258561695741077.3588946-CDS-S-ischiensis_contig9:1925711..1925856Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 1925712..1925856 -
1622817389.4611566-CDS-S-ischiensis_contig9:1926638..19266701622817389.4611566-CDS-S-ischiensis_contig9:1926638..1926670Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 1926639..1926670 -
1695741077.3675706-CDS-S-ischiensis_contig9:1926638..19266701695741077.3675706-CDS-S-ischiensis_contig9:1926638..1926670Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 1926639..1926670 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig9.20610.1prot_S-ischiensis_contig9.20610.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig9 1920189..1926670 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig9.20610.1

>prot_S-ischiensis_contig9.20610.1 ID=prot_S-ischiensis_contig9.20610.1|Name=mRNA_S-ischiensis_contig9.20610.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=194bp
MTTFGGLYRYRMKDVVRVSGFDKLTPRVQFLYRRGALLNVHAERTSEKML
SDALGEALQGQGNISLVEYSTDVDASALPPRYDVYCELVHTGGSGGEGGV
AEEISDDELGKLASAMEAALLPRNRTYARDRSEGYIGPLHVVRVEAGTFD
KYWRYVIEDLGGDPSQFKLPRCINNDKMRAIIRDGVAAKAGAQ*
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mRNA from alignment at S-ischiensis_contig9:1918378..1926706-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig9.20610.1 ID=mRNA_S-ischiensis_contig9.20610.1|Name=mRNA_S-ischiensis_contig9.20610.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=8329bp|location=Sequence derived from alignment at S-ischiensis_contig9:1918378..1926706- (Schizocladia ischiensis KU_0333)
CACGAGCTTGAGGAGGGCAAGAGCTACGAGGTGATCATGACCACCTTCGG
AGGCCTGTACCGCTACCGGTGAGAGCCTGGAGGTCCCCCGTGGGGAGGGT
TGACAGATTTGCCCTTTTACCCCCGGGGCCCGTATACTCATAGGTATTAG
TGTGCAGGTCCAATTTAGCGGGGGTAAAAGGGTTGAGTAGTTCTAGGCAG
TACTGTAGCGTGTGCTTGGAAGTGCTGTGCTCTGCTTGGTCTTCCTCCCC
CTCTGGTCTGCCTTCTGGTTTATGAGAAAGGAAGGCACCCCTGTCGAGAC
CATTATGTAGTGATGTGGTGTGAATGTCCCAAACGCACTACTTGTACATT
AGAGTCTCGTTTCGGGGCGGGCCTTTTGGCATGGGGCCTGGAACTCGCTG
CTTATCTACCCATCAAATTAGAGTGCACTTCGTGTCTCGTCACAGTTCAT
TGCATCAGTCCTATGATGCGATGCCATGTGGCTTCCCACTGCGCCGCTCG
AGAGCTTGCAGCACGTCACATCACATCACACCACATCACGTCACATCACG
TCACATCACGTCACATCACATCATGTCACGCACACGCAGGATGAAAGATG
TGGTCCGCGTGTCCGGGTTCGACAAGCTCACGCCTCAGGTGCAAATCACA
TCACGTCACATCACATCACATACATCTCATCACATAACATCACAGCACAT
CACACCATGCACGCGCAGGATGAAAGACATGGTCCGCGTGTCCAGGTTCG
ACAAGCTCACGCCTCGGGTGCAGTTGAGAGCTCACTGCACGTCACATCAC
ATCACATCACATCGCGTCACATCACATCACATCACGTCACGCACGCGCAG
GATGAAAGATGTGGTCCGTGTGTCCGGGTTCGACAAGCTCACGCCTCGGG
TGCAGTTCCTGTACCGCCGGGGGGCGCTGCTGAACGTGCACGCAGAGCGC
ACGAGCGAGAAGATGCTGTCCGACGCCCTGGGTGAGGCGCTGCAGGTGGG
CCCGCTAACTTAACCCTTTTACCCCTGCTAAATTAGACTTACACGCTAAA
ACTCTATGATTTTACGGGCCTCAGGGGTAAAAGGGTTAACAATAACTGCC
CCCTTCCTCTCCTCACGTTTTCCCTTAGTTTCGTTTTTCCTTCTTCCTTC
TTCTTCAATCGCTGAACACTCACTGTACTCGTACTGTTCTCTCGTCGCTG
CTCTGTAGTATGCATGCACTACTGTACTTTGCGGCGCTGTACTGTGCTGT
GCTGTTCTGTACCGTGCTGTACTGTACTGCACGGTACTGTACTGCACTGT
ACTATACTGCACGGTACTGTACTGCACTGTACTCCACTGTACTGTACTGT
ACTGTACTGCACTAGTCTGTATTGTACTATGCTGCACTGTGCTGTACTGT
GCTGTACTGCACTGTACTGTACTGCACTGTACTGTACTGTATTGCACTGT
ACTGTACTGTATTGTACTGCACGGCACTGTGCTGTACTGTACTGTACTCT
ACTGCACTGCACTGCACTGTACTGCACTGCACTGTACTGTACAATAATGT
ACTGCACTGCACCGTGCGGTACTGTACTGTGCATGTGCTGTACTGTACTG
TACTGTACTGTACTGTACTGTACTGTACTGCACTGTACTGCACTGTACTC
TACTGGACTGCACTGTACTGCACTGCTCTGCACTGTACTGTGCTGTACTG
CACTGTACTGCATGGCACTGTGCTGTACTGTGCTGTACTGCACGGTACTG
TACTGTGTATGTGCTTCTGTACTGTACCTCACATGTGCTACTGTACTGTA
CTGTACTGCAGGGCCAGGGCAACATCTCCCTGGTGGAGTACAGCACGGAC
GTGGATGCCTCCGCTCTCCCCCCGCGCTACGACGTCTACTGCGAGCTGGT
ACACACCGGGGGAAGCGGGGGTGAAGGCGGCGTGGCAGAGGTGAGAGGCC
CGCTGCACACAGTGATGGAATATCGATCAGCAATTATGTGATGTGATGTG
GTGTGCACTCTAATTACTGTAGTTTGACATCACATCACATCACATCACAT
CAATATCAACATCACAGAGGTGACCCTACTGGGACAGGGGGCAGTGATGG
AATATCGATCAGTAGATAGCTATCGGGCTCGACTGATTTTGTGGGTGGCG
TTACTAACTACAAGGAAGGGCCATTGTTGAGGTCCTTAGTGACGTGGCCC
GCACCTTGCCCCATGTTGTTCCTTAAAATACTTGGATTCAGTGTGGGGCA
AACTATCGAATATCGACTATCGATAGACATATAGATCAGTGCCGCTGATT
GTTTTGGGACGAGCCTTTTGGCACGGGGCCTGGAACTCGCCGCTTATCTA
CCACTCAAAATAGATCAGTGCCACTTATCTACCACTCAAAATAGATCAGT
GCTGTCGATGGATAGGTTGATTTGCGTGGATATTCCATCACTGGCTGCAC
ACTACTGTACACTGTGCAGTAGAATGCTCCCCGTACGCAAGCAACTGCAC
CCACAGTACAGCGTTTTTTATGTACTCCTGCTCCGTCTCGACCGAGGCGC
GTGGTCAATGGTCTCGGTACTACGGCAAGCACAACGTCAGTATATGTATA
TATTTTCTGTACTGTGCGACTGTACAGTACAGTATAGCACTTTGAAGTAC
AGTACTGCATACTTCGAGCCCCCGATGGAGACGTTCGGTTTGGCGCGACG
TCGCTGCCCCTCTTGTCGTCTTGTGGGCGCCGCCGCCGCCCTTTTTATTT
TTTCCTCCTACCTAATCTCGTCTTTAAAACTTTTTTCCCCCGTTCTGGCG
CCTGGAAGCTCTAAAACCCAGCATGGGGCCGCCGGCACCCCCCGGGGGCC
TGCGTCCTCGTCCTGCCCCAACACAACACCCCAAGACCATGCTTTGCTTT
GCGATAGTCAAGTATCGCAGAGAAGTGGTTGAATGGTCCCCAAAGACCTC
TGAATGCAGGACCTCGGTGTCGACCCGGGGGGTCATTGAATGGCGGGTGG
TGAATCGGACCGGCTCTCGAGCGAGGAGTGACATGTTGCGGAGAAGGGTG
GGCGAGGGTTCGTTCGTGGGGGCAAGGCGTTTGCTTCTCTTGAGGCTGAT
ACTGTATTGTTGGTGCAGTCAGTACTGTACAGTACTCAGTAGGTGCAGTA
CAGTACAGTACGGTACTCAGCAAGTGCAGTACAGTATGAGTACAGTGCAG
TACACAGTAGGTGCAGTACAGTACGGTACAGTACTCAGTAGGTGCAGTAC
AGTACTGTACAATACTCAGTAGATGCAGTACAGTGCAGTACAGTACTCAG
TATGTGCAGTACGGTGCAGTACAGTGCTCAGTACGTGCAACTGAGCATGC
AGTACAGTACAGTGCTCAGTATGTGCAGTACAGTAGGTACAGTACTCAGT
ACGTGCAGTCCAGTACAGTACAGTACTCAGTAGGTGTAGTAGAGTACATA
CAGTGCAGTACTCAGTAAGTGCAGTACAGTACAGTACAGTACTCAGTACG
TGCAGTACAATAGCGTGGCGGTACAGCAACACACGATTGTAGCATATGGT
ACGCGCGTGTTCTTTAATGGCTACAGCGCGCGGGTTCGGGGCCCCGTCCC
AAAATGGGGTACCTCACCAGAGAAGACATAGGCACCCTTCTATCACTCAC
AGGGCACCGGAACAAACGGCAGAAGGACAAATCCACACCACTACTACCTA
GTGCAACTGTACTTCCGGAAGCTGTCAGTACAGTAGCAAGTACTCGAGTA
CTTCCAAGCACCCGTACGAGCTTAGGGTTAGGTTGGCTGAGCCTTCCCAT
GCCGCACGCCTCCCCATAATATGACAATTACTAATATATGAACACTCAAT
TCTTAAATGGGACAACTACTAATACGAGAACAGTCAATCTCACACACGCG
CGATTGTACCTCGTTACAATTTTTTATTGTTTGGATGGCATGCGAGTTCC
GGGCCCCGTCCCAACAACGTAGGGTGGGGACCTCACCAGAAGCCCTTCGT
TTCACCCGCAATTTATATGAATCACGCCTGCACAGGAGATCAGCGACGAT
GAGCTGGGCAAGCTGGCCAGCGCCATGGAGGCCGCGCTCCTGCCAAGGAA
CAGAACGTACGCCCGCGACCGCTCGGAGGGCTACATTGGCCCCCTGCACG
TGGTGCGGGTGGAGGCGGGCACCTTTGACAAGTACTGGCGATACGTCATA
GAGGTGGGTGTTCGGTTTTCTCTGTGGCATATAGTCTATGTGCCGTTTTT
ACTTCCGGAAGTACTTGAAAATAGGTAGTAACTTTACTCGAGTACAAAGT
CGGGTACCTTTGACAAGTACTGGCGATACATCACAGAGGTGGGTGTTTGA
TTTTACTCTGTGGTATAATGTGCCGTTGTACTTCCGGAAGTGCTTGAAAA
TAGGTACTTCGAAGTACTCGAGCACAAAATTCGGGCACCTTTGACAAGTA
CTGGCGATTCGTCATAGAGGTGGGTGTTTGAAAATTATTTTTGATGGCAA
TGGAGTTCCGTCTCGACCGAGGCGCGTGGTCAATGGTCTCGGGACTACGG
CAAGCACCACGCGAGTACATATATATGCGAGTATATATATATACATGCAA
GTTCCGGGCCCCGTCCCAACGACCTAAGGTGGGGACCTCACCAGAAGCCC
TGCTTTTCATTTACTCTGAGGTTGAGGTTGGCGTGTTTGCTACCAGTTGT
TGATGTGCTACTCGTACTCTACAGTTAACAGCAACAGCACAGGGCGAGGT
TCAGGGCACTCTACGAAGGTCCTTGACAGTGGCCTTTCCTTAGCTCGCCA
GGGAAGCGTTGTGCGGGGAAGAGGAGGGGGAGGAGGAGGAGGAAGAGGAG
GAGGAAGGGGGGGAAGGGGAAAGAGGACGGGTGGGGGGGAGGGGCGAAAG
GGGGGCAGGAGTGGCGGTGTGGTAGGTGACGGCGCAGAGTAGGCGGCGAC
GCAGAGTAGGCAAAGTCGCCACGTCCGTCCCTGTGTAAGGTTGTGAGCAA
GCAGGATTGGGATCAAGCGTGTCAGCGTGAGACCCCTGTACCGCAAACAC
CAAGCACATACAGTAGCTGACACCAAGAACCCAAATCTATTGTACGCAGC
AGCACAATGGCGTGGCCAGCACCAGAAGGCTCAGTCCGCAGTCGTGCAAG
CGCAAGTGGTGGTCAACAGTACTGGTACTGCTGTACAGTGCTTCCAAGTG
CTTCCGGAAGTACAATATTGTCTTCCCACCTGGCACTGTAGTTACTGTAG
TCCAGCGACATCCAGGCCCTTTAGTGTCTCGTGGGGTACTCTGTCTGTCT
GTCTGTTGGTCAGTCAGTAGTCTGTCTGCGTATCTGTCTCACTCTCTCTC
TCACACTCTCTCTCTCACACTCTCTCTCCCCCTCTCCCTCTCCCCCTCGC
TCTCTCTCTCCCTCTCTCTCTCTCCCTCTCCCTCTCCCTCTCTCGTGTGT
CTGTCTGTCTGCTGGCTGTGATGCAATGCGTTTGGTATGACACGTATTCT
ACTTGGAAGTACAGTACTGTAGCTTGACGCCACAACGGATCATATCACGC
CACGGCGGCCTTGGACATCTCGCAGTATATCCCAAGGGAGCAAGAAGGGG
CGGGGAAAGCGAAGCGGGGGCGGGGCGGGAGACGATACGATGCGATGCGA
TGCGATGCGATGCGATGCAAGTGGTGTACTTGTAATGCGCTGTAGTTTGG
CATCACATCACATCACATCACATCAGAGTCCAGCAAGAAGTGTACCGCTG
TGATGTGATGTGATGTGTGAATCCAATGGACTGTAGTTTGACATCACATT
ATATCATATCACAGTCTAGCAAGAAGTGTACCGCTGTGATGTGATGTGAT
GTGTGAATCTAATGGGCTGTAGTTTTTGGCATGAAGAAAAAAAGCGACTG
GGAAAGAAGAGGTGTTCCTACTTGCGCGAGTTCAGGGCCCCCCATCCCCG
GAAGCCCGTCTTTTCACTCACCTGCACTCGCAGGACATACAGAGCAGAAA
AACAAAGAAAACCAAAGAGGAAGCGGGCGGGCAGAAATAACAGTGGAAGA
GGGGTCTCTTGTGCCACAAGCGGGACATGCAGAAGCAGCACCGATGCCCG
AACGCGTTGGTAGCGCCACCCACAAAATCAGTTGAGCCCGGTGACTATCT
ACTGATCGATATTCCATCACTGCGCTTGCGCTCCCCGCCCTCAGCAGGAC
CTGGGCGGTGACCCTTCACAGTTCAAGCTCCCGCGCTGCATCAACAACGA
CAATATGCGCGCCATCATCCAGGACCAAATAAATATGCTTCGAAGTACCT
ATAAACCATACTCCCAAGTATGTACTCGTACATATGTACTCGAGTACCTC
GAAGTACCTACAAATCTTCGACCTCGGGTCACGCTTGCTAGCTCCCCCCG
CCCTCACCAGGACCTTGGCGGCGACCCGAGCCAGTTCAAGCTCCCCCGCT
GCATCAACAACGACAAGATGCGCGCCATCATCCGGGACGGCGTGGCGGCC
AAGGCGGGGGCGCAGTGATCACCTGCAATGAATGCGGCATTTGCGTAATC
AACGACGGCGTGGCAACTGAAGGTGAAATGATCCAGGAAGGCGGTGGCGG
CGGCCAAGGCGGGGGCGCAGTGATCACCTGCAATGAATGCGACATTGCAT
CATCAAGGACGGCGTGGCGGCTGAAGGTGGGGGCCGGGCGCCGTGACGTG
GCGTGAATAATCCGGGACGGAGTGGCGGCCAAGGCGGGGGCGTAGTGATC
ACCTGCACTGAATGCGACATTGCATCATCAAGGACGGCATGCCAGGCTTA
AGGTGGGGGCCGGGCGTCGTGACGTGGCGTGAGACAATCCAGGAAGGCGG
TGGCGGCCAGGGCGGGGGCACAGCAATGGTATATGACAATGGCGCACCGT
TCTCATATACCACTGGGGCATATCTGCGATCACCTGGGACGTGACGTCGT
TGAGGGTGGCGTGGTGGCCGAGGTGGGGGCGCCGTGATGTCATGTGAACG
TCAACCGGGACGATGTGGCGGGCAAGGCGGGGGCACTGCGATCGCCTGCG
ATGTGGCATCGTCACGGACGGCGTGGCCCAGAAGTGGCGGCTAAGGTGGG
GGTGTTAAGTTGCGATGTCGTGTGAGTGGCTCCATCCGGGACAATGATGT
GGCGGCCCCCACGTCGGGGGCGCAGCGGTACTTTGTCGTGTGATTGTTGT
TGTGATGTGACGTCACGGTGCAAACAATGCCTCGGAGGCGCTCTTAGTTG
ACCTTTCGGGGCCCGGGGGCAGACAAGAAGTAGAATTGCAGTTGTACTGC
TAGAGTATATAAGAGTGTGGTGAGGAAATGTGCGTGGTGCCGTTTTCCTC
AAAGGGTTCACAGCGGGGGTGGGTTCGTTGCGCCACCGCCGCCGGACCGG
CCGGGCAAGTGTGTCAATGCCCGCCATGGAGGGCTACGCGTCTGTACATA
GCTGTTGCTGCAGCACCAGGTCCTGGGGGTGATGTGGTATGTACGAGTCT
CGGTAACATGTGGTATGTACGTTTGTACTTCGTAGTACAGTAACTGTAGT
AATGAAGTGGACTACTTCGAAGTATATCGTACGTATTTATACTTGGAAGT
AGTACAGTAACTGTAGTAGTGAAGTGGACTGCGCCTCGCTCGAAGGTATC
TGCAGCCGTCCTATGCACGGGTAGTTTTCTCCGCTCAAGTAGCCGTAGTA
CTAGTAATAGACCAATCGATGTTTGGTGCGTCAGGGGGTTTCCGGAAGTG
CTGTACTTCCAAGCAGTGCAATAGTGGTCAAACTTGCATACTGTAGTGTT
TCGGCGTGTTAGCAGAAACCCGTGCGTGGTCTTCCGTGCTTGGGCTAGTC
CGGCCCTCCAGTGAGTTGAGGTGCTGTAGCCGAAACCGCAGCTGCAGCCG
TAGATACTTGCCGCAGTGCCCGCGATCAAAAAGCGCGTTCTTTAAATGAC
AACGCAGATGACACACTACCGTAGCCTCGGGAAGCCCGCCGATGGGCTCC
GGAAGCACCTGCAGAAGAGGCGTTTTGACGTGTTTGTTGCCAGTACAAGT
CCAGCAGGCAGTGCGGACTCAGACGAGGAGCAAGAGGAGCGTAATACGGA
CTCGGATGAGGAGCGAAAGGTGCGTAATATGCGTTGCGCTCCTCTTGCTC
CTTGTGTGAGTCTGCACTGCCTGAAGGACGTGTACTTGGAACATACACGT
CAAAGCGCCCCTTCCGCAGATTGTCCCGGAGCTCATCAGCGGCCTTCCCG
GCCTTTCCGAACTACAGTACTGTGTCATCTGCGTCGTCATTGAAAGAATG
ACAGGGGCCGGCCTCGCCGGCCCCTGCCC
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Coding sequence (CDS) from alignment at S-ischiensis_contig9:1918378..1926706-

>mRNA_S-ischiensis_contig9.20610.1 ID=mRNA_S-ischiensis_contig9.20610.1|Name=mRNA_S-ischiensis_contig9.20610.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1164bp|location=Sequence derived from alignment at S-ischiensis_contig9:1918378..1926706- (Schizocladia ischiensis KU_0333)
ATGACCACCTTCGGAGGCCTGTACCGCTACCGATGACCACCTTCGGAGGC
CTGTACCGCTACCGGATGAAAGATGTGGTCCGTGTGTCCGGGTTCGACAA
GCTCACGCCTCGGGTGCAGTTCCTGTACCGCCGGGGGGCGCTGCTGAACG
TGCACGCAGAGCGCACGAGCGAGAAGATGCTGTCCGACGCCCTGGGTGAG
GCGCTGCAGGATGAAAGATGTGGTCCGTGTGTCCGGGTTCGACAAGCTCA
CGCCTCGGGTGCAGTTCCTGTACCGCCGGGGGGCGCTGCTGAACGTGCAC
GCAGAGCGCACGAGCGAGAAGATGCTGTCCGACGCCCTGGGTGAGGCGCT
GCAGGGCCAGGGCAACATCTCCCTGGTGGAGTACAGCACGGACGTGGATG
CCTCCGCTCTCCCCCCGCGCTACGACGTCTACTGCGAGCTGGTACACACC
GGGGGAAGCGGGGGTGAAGGCGGCGTGGCAGAGGGCCAGGGCAACATCTC
CCTGGTGGAGTACAGCACGGACGTGGATGCCTCCGCTCTCCCCCCGCGCT
ACGACGTCTACTGCGAGCTGGTACACACCGGGGGAAGCGGGGGTGAAGGC
GGCGTGGCAGAGGAGATCAGCGACGATGAGCTGGGCAAGCTGGCCAGCGC
CATGGAGGCCGCGCTCCTGCCAAGGAACAGAACGTACGCCCGCGACCGCT
CGGAGGGCTACATTGGCCCCCTGCACGTGGTGCGGGTGGAGGCGGGCACC
TTTGACAAGTACTGGCGATACGTCATAGAGGAGATCAGCGACGATGAGCT
GGGCAAGCTGGCCAGCGCCATGGAGGCCGCGCTCCTGCCAAGGAACAGAA
CGTACGCCCGCGACCGCTCGGAGGGCTACATTGGCCCCCTGCACGTGGTG
CGGGTGGAGGCGGGCACCTTTGACAAGTACTGGCGATACGTCATAGAGGA
CCTTGGCGGCGACCCGAGCCAGTTCAAGCTCCCCCGCTGCATCAACAACG
ACAAGATGCGCGCCATCATCCGGGACGGCGTGGCGGCCAAGGCGGGGGCG
CAGTGAGACCTTGGCGGCGACCCGAGCCAGTTCAAGCTCCCCCGCTGCAT
CAACAACGACAAGATGCGCGCCATCATCCGGGACGGCGTGGCGGCCAAGG
CGGGGGCGCAGTGA
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