mRNA_S-ischiensis_contig9.20600.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig9.20600.1
Unique NamemRNA_S-ischiensis_contig9.20600.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
BLAST of mRNA_S-ischiensis_contig9.20600.1 vs. uniprot
Match: A0A836CM13_9STRA (Cytochrome b5 reductase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM13_9STRA)

HSP 1 Score: 359 bits (921), Expect = 1.240e-116
Identity = 183/348 (52.59%), Postives = 240/348 (68.97%), Query Frame = 2
Query:   38 LPEPVNPLLIWGGLTAAGLTAAAVVARVLLLVGSLGSAMMGSGSNGAPFSRSSRLPKAVKDVRYEARKVFGSFQAWVDRVNGAWRKATRPARVPLPDKEWSVCTLQERTKLNRNTRRYMFKLPTPASVLPLGLGQQITLCGLDRDDKVVQGGFVPSSRRDVPGYFEILVSKDGDADDALPGANSIQM-----AKLLGSMAIGDEMACKPGRSGMVYRGPYSPITDVVLVATGLGIVPMLQLVNELLPAHDTSVDTATVVWVNEHTEDFVLYRDVEKAFYKNHKKLDVACILEKDMFGHQLAANPRVVEAVPDFRIGTLAAVSGPEYFVRKVQDYLSRRGYPDDVIISL 1066
            +P PV P+L+    T     A A+ ARV L++G+LG A  G+    A  +  + +  A+ D RY  R   GS QAW+D V+ A+ +A  P  V LP  +WSVCTLQER ++     +Y FKLP PA VLPL LGQ++TLCGLD   +V     VP S R   GY +++V+K    D  L  A +  +     A+LL ++AIGDE+A +PGR+ + YRGPY+PITDVVL+A GLG+VPMLQLV ELLPA ++SV  A+VVW+NE  EDF LY ++E+AFYK H+KLDVACI+E+D+FGH LA N RV EAVP FRIGTLA VSGP++FV KV+DYL R+GYPD+VII++
Sbjct:    1 MPPPVPPVLVGAATTLLVCLAVALAARVPLVLGALGRAAAGAWGGAAALAARANVGGALGDARYALRLALGSAQAWMDEVHAAFNRAFGPEDVMLPANDWSVCTLQERMRVGNGCVKYRFKLPGPACVLPLELGQELTLCGLDAAGRVASASCVPLSPRAAQGYVDVVVAKPRPPDAPLTAAGAAAVGGADFARLLETLAIGDEVAARPGRAMLQYRGPYAPITDVVLIACGLGVVPMLQLVRELLPARESSVRAASVVWLNEAAEDFALYGELERAFYKYHRKLDVACIIERDLFGHALAGNRRVREAVPAFRIGTLAVVSGPDFFVAKVRDYLVRQGYPDEVIITV 348          
BLAST of mRNA_S-ischiensis_contig9.20600.1 vs. uniprot
Match: D7FMW3_ECTSI (Cytochrome b5 reductase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMW3_ECTSI)

HSP 1 Score: 341 bits (874), Expect = 2.310e-108
Identity = 183/367 (49.86%), Postives = 250/367 (68.12%), Query Frame = 2
Query:    2 SEHLQVTLDRSVLPEPVNPLLIWGGLTAAGLTAAAVVARVLLLVGSLG-SAMMGSGSNGAPFSR-----SSRLPKAVKDVRYEARKVFGSFQAWVDRVNGAWRKATRPARVPLPDKEWSVCTLQERTKL-NRNTRRYMFKLPT-PASVLPLGLGQQITLCGLDRDDKVVQGGFVPSSRRDVPGYFEILVSKDGDA---DDALPGANSI-QMAKLLGSMAIGDEMACKPGRSGMVYRGPYSPITDVVLVATGLGIVPMLQLVNELLPAHDTSVDTATVVWVNEHTEDFVLYRDVEKAFYKNHKKLDVACILEKDMFGHQLAANPRVVEAVPDFRIGTLAAVSGPEYFVRKVQDYLSRRGYPDDVIISL 1066
            S  L+V+LDRSV+PEPV P ++WG  TAA L   AV AR+  L+G++G S+ +  G+   P +      + +L  A   +RY AR   GS  +W  R +  W +A  P  V LP  +WSVCTL E+ +  +    RY F LP+ P +VLPL LGQ++TLCGLD  ++VVQG +VP + R   G FE++V K  D    DD LP   S  + ++ L ++ +GDE+A KPGR+G+VY G   PITD+VLVA G+G+VPM+Q+VNELLP+  +SV +A+VVW+NE  EDF LY ++EKAF++NH+KLDV+CI+E+D+FG  L AN  V  A P+F+IGTLAAV+GP++F RKV DYL RRGYP+D II L
Sbjct:   68 SPLLEVSLDRSVMPEPVVPPVMWGTTTAAFLGVVAVTARIPRLLGAVGKSSTVTVGNTLGPVATPAAGVAGKLASAFPGLRYGARVWAGSLGSWASRRSQQWAEAFGPEAVVLPANDWSVCTLLEKVREGDGGLYRYRFGLPSSPDAVLPLELGQELTLCGLDASNQVVQGNYVPLTPRKQRGAFEVVVMKATDGAELDDGLPTTRSNREFSRFLDNLPLGDEIAVKPGRAGLVYGGANQPITDLVLVANGVGVVPMIQMVNELLPSSSSSVASASVVWLNEKAEDFALYSELEKAFFRNHRKLDVSCIVERDLFGSHLEANANVNAASPEFKIGTLAAVAGPDFFTRKVTDYLVRRGYPEDAIIGL 434          
BLAST of mRNA_S-ischiensis_contig9.20600.1 vs. uniprot
Match: A0A6H5KGP4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGP4_9PHAE)

HSP 1 Score: 213 bits (541), Expect = 2.070e-62
Identity = 101/178 (56.74%), Postives = 138/178 (77.53%), Query Frame = 2
Query:  539 LVSKDG-DADDALPGANSI-QMAKLLGSMAIGDEMACKPGRSGMVYRGPYSPITDVVLVATGLGIVPMLQLVNELLPAHDTSVDTATVVWVNEHTEDFVLYRDVEKAFYKNHKKLDVACILEKDMFGHQLAANPRVVEAVPDFRIGTLAAVSGPEYFVRKVQDYLSRRGYPDDVIISL 1066
            + + DG + DD LP   S  + ++ L ++ +GDE+A KPGR+ +VY G   PITD+VLVA G+G+VPM+Q+VNELLP+  +SV +A+VVW+NE  EDF LY ++EKAF++NH+KLDV+CI+E+D+FG  L AN  V  A P+F+IGTLAAV+GP++F RKV DYL RRGYP+D IISL
Sbjct:    1 MKATDGAELDDGLPTTRSNREFSRFLDNLPLGDEIAVKPGRARLVYGGANQPITDLVLVANGVGVVPMIQMVNELLPSSSSSVASASVVWLNEKAEDFALYSELEKAFFRNHRKLDVSCIVERDLFGSHLEANANVNAASPEFKIGTLAAVAGPDFFTRKVTDYLVRRGYPEDAIISL 178          
BLAST of mRNA_S-ischiensis_contig9.20600.1 vs. uniprot
Match: A0A7S2A766_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2A766_9STRA)

HSP 1 Score: 190 bits (482), Expect = 2.480e-50
Identity = 113/276 (40.94%), Postives = 159/276 (57.61%), Query Frame = 2
Query:  272 RVNGAWRKATRPAR----VPLP----DKEWSVCTLQERTKLNRNTR-RYMFKLPTPASVLPLGLGQQITLCGLDRDDKVVQGGFVPSSRRDVPGYFEILVSKDGDADDALPGANSIQMAKLL-GSMAIGDEMACKPGRSGMVYRGPYSPITDVVLVATGLGIVPMLQLVNELLPAHDTSVDTATVVWVNEHTEDF-VLYRDVEKAFYKNHKKLDVACILEKDMFGHQLAANPRVVEAVPDFRIGTLAAVSGPEYFVRKVQDYLSRRGYPDDVIISL 1066
            R    W K  RP      VP+P    D  W VC L+ +  + R+   RY F LP    VLPL LGQ ITLC LD  D +V+G F  + + D   +  +L  K+ +  +   GA+  + A +L G M IGDE+A KPG S + YRG Y P+TD+V VA+G+GIVP+L  V  +LP+  +SV   ++VW+N   +DF V   ++E+ ++K + KL V+CI E ++    L  N  + EAVPDF  GT+A +SGP  F  K + YL  RGYP+D +  L
Sbjct:  195 RATRFWNKV-RPVEKIDAVPMPFHPEDDGWGVCMLRSKEHIGRSPFVRYDFDLPRADYVLPLSLGQTITLCCLDESDNIVEGNFY-TFKEDTGTFSIVLPEKNEEETEYDIGADRAKFAHVLKGEMGIGDEIALKPGVSTLNYRGQYLPVTDIVYVASGVGIVPILDQVKAVLPSGSSSVKGVSLVWINGDGKDFDVAINELEEEYFKYNTKLAVSCIGE-NVRKKALEENEEIEEAVPDFNPGTMAVISGPRAFSEKAKAYLKNRGYPEDCLCVL 467          
BLAST of mRNA_S-ischiensis_contig9.20600.1 vs. uniprot
Match: A0A7S2FHA9_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FHA9_9STRA)

HSP 1 Score: 189 bits (480), Expect = 3.930e-50
Identity = 105/291 (36.08%), Postives = 166/291 (57.04%), Query Frame = 2
Query:  221 VRYEARKVFGSFQAWVDRVNGAWRKATRPARVPLPDKEWSVCTLQERTKLNRN-TRRYMFKLPTPASVLPLGLGQQITLCGLDRDDKVVQGGFVPSSRRDVPGYFEILVSKD-----GDADDALPGANSIQ--MAKLLGSMAIGDEMACKPGRSGMVYRGPYSPITDVVLVATGLGIVPMLQLVNELLPAHDTSVDTATVVWVNEHTEDFVLYRDVEKAFYKNHKKLDVACILEKDMFGHQLAANPRVVEAVPDFRI-GTLAAVSGPEYFVRKVQDYLSRRGYPDDVIISL 1066
            V +  + + G    + D V   W     P R  L D EW+ CTL  +T +  +   RY F+L +      LGLGQ ++L G+D  ++V++   +P++ R + G F++++  +       A  +L  +N+ +     ++ +M +G+++A KPG   + Y G Y PI DV  +A+GLGIVP L L+NELLP+  +SV+TA +VWVNE   DFV Y D+E  +YK  KKLDV+C+L+ D FG +L  N   + +VPD  + G +  V+GPE F   V   L+ + +P+  I+ L
Sbjct:  170 VVHRLKLLKGKGANFADSVRDTWTWVMPPQREQLGDGEWAACTLAGKTPITGSGCTRYSFRLNSARQTFGLGLGQALSLIGIDEANRVLKVHMIPATPRLMAGSFDLILPDEDIETKAQASRSLTASNAEEEGFGAMVQTMELGEQIAAKPGDERLTYDG-YLPIDDVHCIASGLGIVPALGLLNELLPSRASSVETANLVWVNEDEGDFVNYVDMENVWYKFSKKLDVSCVLDNDTFGSELWENEAFIASVPDSYVEGMMIVVAGPENFQLNVAKELAAKDFPEGAIVCL 459          
BLAST of mRNA_S-ischiensis_contig9.20600.1 vs. uniprot
Match: B7FWJ3_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FWJ3_PHATC)

HSP 1 Score: 186 bits (471), Expect = 3.680e-49
Identity = 111/286 (38.81%), Postives = 155/286 (54.20%), Query Frame = 2
Query:  251 SFQAWVDRVNGAWRKATRPAR-VPLPDKE-----WSVCTLQERTKLNR-NTRRYMFKLPTPASVLPLGLGQQITLCGLDRDDKVVQGGFVPS--SRRDVPGYFEILVSKDGDADDALP----GANSIQMAKLLGSMAIGDEMACKPGRSGMVYRGPYSPITDVVLVATGLGIVPMLQLVNELLPAHDTSVDTATVVWVNEHTEDFVLYRDV-EKAFYKNHKKLDVACILEKDMFGHQLAANPRVVEAVPDFRIGTLAAVSGPEYFVRKVQDYLSRRGYPDDVIISL 1066
            +F+    RV   W +  R    +P+P  E     W +CTL+ + +L + N  +Y F LP P  VLPL LGQQI++  LD D  V QG F     S    PG F IL       ++       GAN ++  K    + +GDE+A KPG   + YRG Y P+T +V +A G GIVP+L  V  +LPA  +SV + +VVW+NE  +DF +  ++ EK +YK  KKL V+C+++  M    L  N  V  AVPDF  GT+A ++GP    +K   +L  RGYP D I  L
Sbjct:  144 TFRLVSGRVQRVWERFQRVDEGIPMPFDEKANDGWGICTLKSKERLGKSNFMQYTFDLPEPDYVLPLDLGQQISMMCLDDDGDVAQGDFFSYNLSASPKPGSFTILFPTGSHEENTCSIGSSGANFLRALKQ--DVKVGDEIALKPGPIKLSYRGQYLPVTGMVYIACGTGIVPVLDQVRAVLPADSSSVTSVSVVWINEEAKDFDVTAELLEKEYYKYSKKLAVSCVVDNTMQRQSLGDNTEVHAAVPDFTQGTMAVIAGPSDMAKKAIAFLENRGYPRDTICVL 427          
BLAST of mRNA_S-ischiensis_contig9.20600.1 vs. uniprot
Match: A0A7S3KXF0_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3KXF0_9STRA)

HSP 1 Score: 183 bits (464), Expect = 3.910e-48
Identity = 107/261 (41.00%), Postives = 154/261 (59.00%), Query Frame = 2
Query:  314 VPLPDKE----WSVCTLQERTKLNR-NTRRYMFKLPTPASVLPLGLGQQITLCGLDRDDKVVQGGFVPSSR--RDVPGYFEILV-SKDGDADDALPGANSIQMAKLLGS-MAIGDEMACKPGRSGMVYRGPYSPITDVVLVATGLGIVPMLQLVNELLPAHDTSVDTATVVWVNEHTEDF-VLYRDVEKAFYKNHKKLDVACILEKDMFGHQLAANPRVVEAVPDFRIGTLAAVSGPEYFVRKVQDYLSRRGYPDDVIISL 1066
            +P+P +E    W V TL+ R +L + N  +Y F+LP P  VLPL LGQQ++LC LD +  V +G F P S   +  PG F +LV +K  + +  L G  +    +++   + IGDE+A KPG + + YRG Y P+TD++ VA G GIVP+L+    +LP   +SV   TVVW+NE T+DF VL   +EK ++K   KL V+CI++        + N  +  AVPDF+ GT+A ++GP   + K   YL  RGYP D I  L
Sbjct:  171 IPMPFEEGNEGWGVSTLRSRKRLGKTNFIQYEFELPEPDYVLPLELGQQVSLCCLDNEGNVARGDFFPFSPTGKTKPGSFSVLVPNKTPEENIVLLGLEAANFCRVVKQELKIGDEVAIKPGDTRLNYRGQYLPVTDILYVACGNGIVPVLEQARAVLPRGSSSVAAVTVVWINEETKDFDVLAEVLEKEYFKYSDKLAVSCIVDSPR-RRDWSDNNEINAAVPDFKQGTMAVLAGPTDLMEKAFYYLEDRGYPSDTICVL 430          
BLAST of mRNA_S-ischiensis_contig9.20600.1 vs. uniprot
Match: B8CAB2_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CAB2_THAPS)

HSP 1 Score: 181 bits (459), Expect = 2.790e-47
Identity = 101/257 (39.30%), Postives = 145/257 (56.42%), Query Frame = 2
Query:  314 VPLP---DKEWSVCTLQERTKLNRNTRRYMFKLPTPASVLPLGLGQQITLCGLDRDDKVVQGGFVPSSRRDVP-GYFEILV-SKDGDADDALPGANSIQMAKLLGSMAIGDEMACKPGRSGMVYRGPYSPITDVVLVATGLGIVPMLQLVNELLPAHDTSVDTATVVWVNEHTEDFVLYRD-VEKAFYKNHKKLDVACILEKDMFGHQLAANPRVVEAVPDFRIGTLAAVSGPEYFVRKVQDYLSRRGYPDDVIISL 1066
             P+P   D  W  CTL+ + K+      Y F LP     +PL LGQQI  C L  +D VV G F P    D   G   ++V ++D   + AL G  S +  ++L  M  GDE+A KPG++ + YRG   P+TD+V +A+GLGIVP++  V  + P   +SV   +VVW+N+   DF L  D +E  + K   KL V+CI++ D+  + +  N  V EAVP F  GT+A +SGP+ F  K + YL R+GYP++ I  L
Sbjct:  189 TPMPFEGDGGWGKCTLKSKKKIGNTFTVYEFALPRSDYTVPLALGQQIDFCCLGLEDNVVSGSFYPYDMNDGERGVVRVVVPNQDAKGNAALVGLGSSKFIEVLHEMRQGDEVALKPGKTTLEYRGERVPVTDMVYIASGLGIVPIVDQVKAITPKGTSSVKVTSVVWINDQRSDFDLAMDELESEYTKYSTKLAVSCIMD-DVMKNPMEGNAEVEEAVPYFNAGTMAVISGPKRFSEKAKAYLMRKGYPENCICVL 444          
BLAST of mRNA_S-ischiensis_contig9.20600.1 vs. uniprot
Match: A0A7S3DPS7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DPS7_9STRA)

HSP 1 Score: 176 bits (445), Expect = 7.870e-46
Identity = 99/269 (36.80%), Postives = 151/269 (56.13%), Query Frame = 2
Query:  257 QAWVDRVNGAWRKATRPARVPLPDKE--WSVCTLQERTKLNRNT-RRYMFKLPTPASVLPLGLGQQITLCGLDRDDKVVQGGFVPSSRRDV--PGYFEILVSKDGDADD-------ALPGANSIQMAKLLGSMAIGDEMACKPGRSGMVYRGPYSPITDVVLVATGLGIVPMLQLVNELLPAHDTSVDTATVVWVNEHTEDF-VLYRDVEKAFYKNHKKLDVACILEKDMFGHQLAANPRVVEAVPDFRIGTLAAVSGPEYFVRKVQDY 1024
            Q  ++R +  WR +     +P  D+   W VCTL+ R +L +    ++ F+LP P   +PL LGQQ++LC LD D  V +G F P ++     PG F IL     D+          L  AN +++ K    + IGDE+A  PG   + Y+G Y P+TD+V VA G GIVP+L  +  +LP+  +SV + TVVW+N+ T+DF V+   +EK ++K  +KL V+CI+ K       +AN  +  A+PDF  GT+A ++GP+  + K   Y
Sbjct:  124 QGRLERWSEKWRPSPVSEPMPFEDENEGWGVCTLRARKRLGKTQFMQFDFELPQPEYTVPLDLGQQVSLCCLDNDGNVARGNFFPFTKESPAKPGSFSILAPNIDDSSSEETIFRIGLENANFVRVIK--NELKIGDEVALTPGSHRLSYKGQYLPVTDMVYVAYGTGIVPVLDQIRSVLPSGASSVSSVTVVWINDSTQDFDVVAELLEKEYFKYSEKLAVSCIVGKVQDTPDFSANDEINTAIPDFLQGTMAVLAGPKQIIEKATFY 390          
BLAST of mRNA_S-ischiensis_contig9.20600.1 vs. uniprot
Match: A0A7S1XNN4_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XNN4_9STRA)

HSP 1 Score: 171 bits (433), Expect = 6.760e-44
Identity = 123/379 (32.45%), Postives = 193/379 (50.92%), Query Frame = 2
Query:    5 EHLQVTLDRSVLPE-----PVNPLLIWGGLTAAGLTAAAVVARVLLLV----------------GSLGSAMMGSGSNGAPFSRSSRLPKAVKDVRYEARKVFGSFQAWVDRVNGAWRKATRPARV-PLPDKEWSVCTLQERTKL--NRNTRRYMFKLPTPASVLPLGLGQQITLCGLDRDDKVVQGGFVPSSRRDVPGYFEILVSKDGDADDALPGANSIQMAKLLGSMAIGDEMACKPGRSGMVYRGPYSPITDVVLVATGLGIVPMLQLVNELLPAHDTSVDTATVVWVNEHTEDFVLYRDVEKAFYKNHKKLDVACILEKDMFGHQLAANPRVVEAVPDFRIGTLAAVSGPEYFVRKVQDYLSRRG-YPDDVIISL 1066
            E L+V+L +SVLP           ++ G   +AG++AA V   +LL V                G LG A   + S G  F  ++   +A+ +VR          +   D + G +  A   + V PL   EW  CTL+       +    +Y FKL   A+ LPL +GQ +T+CGLD DD+VV+      S R   GYFE++V  D D            + ++L ++A GDE+A K G   + Y   Y P+T VV +    GI+P L +  ELLP+ + SV+T  +VWVN+   DFV+Y +VE+ FYK  K++DV+C++++D+    + +N  V+++VP +  G +A V+G   F    + +L     YP+D I ++
Sbjct:   63 EALKVSLGQSVLPNGAAAGAAGVGVMLGDGVSAGVSAAKVALALLLKVALPLGASAALGLALYSGLLGDAATSAKSAGQGFGATAS--RAISNVR----------EGIADFIEGIF--AGEESMVDPL---EWFACTLESVNPAGDSEGWLKYRFKLKDKAASLPLDIGQGVTICGLDDDDRVVRMDMPLLSPRKARGYFEVVVRSDSDEP----------LLQVLSTLAPGDEIAAKCGPQRLDYTAEYQPVTSVVALVNADGILPALGVAQELLPSKEGSVETFNIVWVNDKEADFVMYDEVERLFYKFPKQMDVSCVIDEDIVSG-IDSNAAVLDSVPRWEPGAMAIVAGDPGFCSSARSFLEAVAEYPNDTICNV 413          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig9.20600.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CM13_9STRA1.240e-11652.59Cytochrome b5 reductase domain-containing protein ... [more]
D7FMW3_ECTSI2.310e-10849.86Cytochrome b5 reductase domain-containing protein ... [more]
A0A6H5KGP4_9PHAE2.070e-6256.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2A766_9STRA2.480e-5040.94Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S2FHA9_9STRA3.930e-5036.08Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
B7FWJ3_PHATC3.680e-4938.81Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A7S3KXF0_9STRA3.910e-4841.00Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
B8CAB2_THAPS2.790e-4739.30Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A7S3DPS7_9STRA7.870e-4636.80Hypothetical protein (Fragment) n=1 Tax=Amphiprora... [more]
A0A7S1XNN4_9STRA6.760e-4432.45Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig9contigS-ischiensis_contig9:1798463..1811523 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score300.8
Seed ortholog evalue7.1e-79
Seed eggNOG ortholog2880.D7FMW3
KEGG koko:K00326
KEGG ReactionR00100
KEGG Pathwayko00520,map00520
EggNOG free text desc.cytochrome-b5 reductase activity, acting on NAD(P)H
EggNOG OGsCOG0543@1,KOG0534@2759
EC1.6.2.2
COG Functional cat.CH
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionCytochrome b5 reductase domain-containing protein
Ec32 orthologEc-09_002720.1
Exons8
Model size1753
Cds size918
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig9.20600.1prot_S-ischiensis_contig9.20600.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig9 1799147..1810017 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817388.1309059-UTR-S-ischiensis_contig9:1798462..17991461622817388.1309059-UTR-S-ischiensis_contig9:1798462..1799146Schizocladia ischiensis KU_0333UTRS-ischiensis_contig9 1798463..1799146 -
1695741076.2672338-UTR-S-ischiensis_contig9:1798462..17991461695741076.2672338-UTR-S-ischiensis_contig9:1798462..1799146Schizocladia ischiensis KU_0333UTRS-ischiensis_contig9 1798463..1799146 -
1622817388.2311475-UTR-S-ischiensis_contig9:1810017..18100241622817388.2311475-UTR-S-ischiensis_contig9:1810017..1810024Schizocladia ischiensis KU_0333UTRS-ischiensis_contig9 1810018..1810024 -
1695741076.3432598-UTR-S-ischiensis_contig9:1810017..18100241695741076.3432598-UTR-S-ischiensis_contig9:1810017..1810024Schizocladia ischiensis KU_0333UTRS-ischiensis_contig9 1810018..1810024 -
1622817388.243762-UTR-S-ischiensis_contig9:1811379..18115231622817388.243762-UTR-S-ischiensis_contig9:1811379..1811523Schizocladia ischiensis KU_0333UTRS-ischiensis_contig9 1811380..1811523 -
1695741076.3584487-UTR-S-ischiensis_contig9:1811379..18115231695741076.3584487-UTR-S-ischiensis_contig9:1811379..1811523Schizocladia ischiensis KU_0333UTRS-ischiensis_contig9 1811380..1811523 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817388.1423783-CDS-S-ischiensis_contig9:1799146..17992261622817388.1423783-CDS-S-ischiensis_contig9:1799146..1799226Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 1799147..1799226 -
1695741076.2795367-CDS-S-ischiensis_contig9:1799146..17992261695741076.2795367-CDS-S-ischiensis_contig9:1799146..1799226Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 1799147..1799226 -
1622817388.1541173-CDS-S-ischiensis_contig9:1799786..17999811622817388.1541173-CDS-S-ischiensis_contig9:1799786..1799981Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 1799787..1799981 -
1695741076.288904-CDS-S-ischiensis_contig9:1799786..17999811695741076.288904-CDS-S-ischiensis_contig9:1799786..1799981Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 1799787..1799981 -
1622817388.1663826-CDS-S-ischiensis_contig9:1800533..18007011622817388.1663826-CDS-S-ischiensis_contig9:1800533..1800701Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 1800534..1800701 -
1695741076.2975147-CDS-S-ischiensis_contig9:1800533..18007011695741076.2975147-CDS-S-ischiensis_contig9:1800533..1800701Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 1800534..1800701 -
1622817388.1831052-CDS-S-ischiensis_contig9:1805116..18052641622817388.1831052-CDS-S-ischiensis_contig9:1805116..1805264Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 1805117..1805264 -
1695741076.3063428-CDS-S-ischiensis_contig9:1805116..18052641695741076.3063428-CDS-S-ischiensis_contig9:1805116..1805264Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 1805117..1805264 -
1622817388.1981606-CDS-S-ischiensis_contig9:1805956..18060791622817388.1981606-CDS-S-ischiensis_contig9:1805956..1806079Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 1805957..1806079 -
1695741076.315398-CDS-S-ischiensis_contig9:1805956..18060791695741076.315398-CDS-S-ischiensis_contig9:1805956..1806079Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 1805957..1806079 -
1622817388.2093558-CDS-S-ischiensis_contig9:1808464..18085941622817388.2093558-CDS-S-ischiensis_contig9:1808464..1808594Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 1808465..1808594 -
1695741076.3246357-CDS-S-ischiensis_contig9:1808464..18085941695741076.3246357-CDS-S-ischiensis_contig9:1808464..1808594Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 1808465..1808594 -
1622817388.2201786-CDS-S-ischiensis_contig9:1809943..18100171622817388.2201786-CDS-S-ischiensis_contig9:1809943..1810017Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 1809944..1810017 -
1695741076.3338673-CDS-S-ischiensis_contig9:1809943..18100171695741076.3338673-CDS-S-ischiensis_contig9:1809943..1810017Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 1809944..1810017 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig9.20600.1

>prot_S-ischiensis_contig9.20600.1 ID=prot_S-ischiensis_contig9.20600.1|Name=mRNA_S-ischiensis_contig9.20600.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=306bp
MMGSGSNGAPFSRSSRLPKAVKDVRYEARKVFGSFQAWVDRVNGAWRKAT
RPARVPLPDKEWSVCTLQERTKLNRNTRRYMFKLPTPASVLPLGLGQQIT
LCGLDRDDKVVQGGFVPSSRRDVPGYFEILVSKDGDADDALPGANSIQMA
KLLGSMAIGDEMACKPGRSGMVYRGPYSPITDVVLVATGLGIVPMLQLVN
ELLPAHDTSVDTATVVWVNEHTEDFVLYRDVEKAFYKNHKKLDVACILEK
DMFGHQLAANPRVVEAVPDFRIGTLAAVSGPEYFVRKVQDYLSRRGYPDD
VIISL*
back to top

mRNA from alignment at S-ischiensis_contig9:1798463..1811523-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig9.20600.1 ID=mRNA_S-ischiensis_contig9.20600.1|Name=mRNA_S-ischiensis_contig9.20600.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=13061bp|location=Sequence derived from alignment at S-ischiensis_contig9:1798463..1811523- (Schizocladia ischiensis KU_0333)
GTCGGAGCATCTGCAGGTGACGCTGGACCGATCCGTCCTCCCGGAGCCCG TGAACCCCCTGCTCATATGGGGCGGCTTGACCGCCGCCGGGCTCACGGCC GCCGCCGTTGTGGCCAGGGTGCTGCTTCTCGTGGGCTCGCTCGGGTGAGA GCATGTACTGTACTGCACTGTACACTGTACTGTACTACTTGTACGAGTGC TGTATGAGGGGACAAATACTAATACTAATAAAAAGTGGGCATTGTCGGTG ACCTAGCGGTCGGGATCGATCGTCTTGATCGTTCCTCCCGTGACCGTTAG GATGCCTGTGCGCCCAAGAGCAACTCTGCACAGAGACTCACACAAGTACT CGCCGACGGCTACGCTTTGTCGTGGTCTAGCGAGCGGCCCCTCATCCGGC TTGCTGACGCCAAGGCGTCATGGCATTCCGGGCTTGGCCAGTGCACGGCC TGGCCGGTGCAAACCCGGCATGCTCCGTCCCGGCCTAGTTGGGACGCGAG AGTCCATGCCTAAATAGCTACTCCTGTCGGAGGGCAAACCCGAAGTTTCG ACTTAGGGCTGTCGGCATTGCACACACGGTTATGTCGCCAGACAAGCCAA TGAGTACATATAATAAATACATAGCTCTGGCCAGGGAGCTGCTTCTGGTG GGCTCGCTCAGGTGAGAGTCGTGCACTGTAATGCACTGTACACTGTACTG TACTACTTGTACGAGTGCTGTATCAGGGCCGTTCTGGCCAGGGTGCTGCT TCTGGTGGGCTCGCTCGGGTGAGAGCATGTACTGTCCTGCACTGTACACT GTACTGTACTACAGCACTTGTACGAGTCGCGTGGTCAATGGTCTCGGGAC TGCGGCAACCACAACATGAGTACATATATACTTCCAAGTATATATATGCA CGAGTGCGAGCAGGACCCCTCCCTCCCGTGGCAGAGTCAGGGTGTACATA TGTGTATACAAATGCAATGGCTGAACGGCTACCTGCGGGGGCTGGTCGGT GGGCCAGCTGATACCAGGGTTGGCACTCAGAGGTTAATTAGGGCCTAATC AGCCTTCCTTTTATGTCTAATGGCCCCTAATTAGCTCTAATCAAGGGCCT AAAAGGGCACCACTTAGGGGTTAAGTGCCAACCGTGGCTAATACTGGCCC GACGCCCGGAGGTGCGCACAGGGTGGGGTGGCTACTGTACGGAGTCCTGT ACATGTCCGACATGAGTAGAGCCCTGTACAGTCCACACTGTGCTGTGCAG AACTTCTTGTGCTGTACTCTAGGTACAGTAGTGTACTGTACTGTACTGTA GTACTGTACTGTGCTGTATGTATTTGGTGTAGAGATGTAGATTGTTGTAT CCCCGCTAGCCTTTTGTTCACGCCCTCTAGCCATCGCAACCTCCCTCTCT CCCTCCCTCCCTCCCTCCGTCCTTCCTCCCCTCCCTTCCCCCTCCCTCCC TCTCTGGCACGGCTGGTGCGGAACGCCGGGCTTCCTTTCTTTTGCGCAGC TCGGCCATGATGGGCAGCGGCAGCAACGGTGCCCCCTTTAGCAGAAGCAG CCGCCTCCCCAAGGCAGTGAAGGACGTCAGGTGAGAAGAGCTGATGCACA TAAAGTCGGGTGAGAGGGTTAACCCTTTTCCCCCTGGGGTCTGGACAATC ATACGGTTTTAGTGTGTAAGAACGATTTACCAGGGGTAAAAGGGTTTCTC CCTTTAGCAGAAGCAGCCGCCTCCCCAAGGCGGTCAGGGATGTCAAGTGA GAAGAGTTGATGTACATAAGGCCTGCCAGGGGAGGGAGGGGTCCTGCTCC GTCTCAACCGAGGCACGTGGTCGATGGTCTCGGGACTACGGCAAGCACCA CGTGAGTACATGTATATATATATATATGACAGCACTGCACCGAGTGTGTG GTACTGTCCCTATCATACTGCGGAGGGAAGATGGCGATCGTCCGATTGTC CTGTGCCCACGGCATGAGTACATGTACCATAACTTAGGTACTGGCTTGCC AGGGGCGGGAGGGAGATTGCTCCGCCATCAACGGCATGTAGTGAATGGTC TCGGGACTATTGTACGGCAAGTTCAGCGTGAGTACTCGTACGTGTGCATG TATAGAGCTATAGGTGCTACTACAGTCCGGAAGTACTTCGAAGTACTTAT TATCGCTCCGGCGTCAACGGCATGTGGTGAATGGTCTCGGGACCACGGCA AGCACAATGTGAGTACACGTATATATATAGGCACGAGTACTGCTTACGTG TGCTACTACTTCCAGTATGTACTCGAGGACGAAGTGCTTGACGCCACGTG ACATCACATGACATCGCGTGGCACCCTGCTGCAGCAGGGTACCGCTGGCC CGCCGGCCAGCGCCATGCGCTCACCTTGACAACACCATACATCAGACCGG AAGCGTGTGGGACGCGTACGAGTGCACACACACACACACACACACGCACA TATACACACACATGCGCGCGCGCACACACACACACACACACGCGCGCGCG CGCACACACACACACACACACACGCCCAGTGTGAGCAGGATGGCCACCCC GGGGTAGGGGCTCCCTCAATCCCGGGGGCTCTCATTTGGACGGGAGGCGG GCTGCTTCTGACAGTCTTTCTGATTCATATACATTGTACGAAGTAACGAG GTACAATCGCATGTGTGTGAGATTGAGTGATATCGTATTAGTGGTTATCC CGTTTAAGAATCGAGTGAAGGCGGGTGAAAAGACGGGCTTCCAGGGGTGG GGGGCCCTGAACTCGCGTGAGTGGGAACAACTCTCCTTTCCCACTCGCTT TTTTATCTTCGTGCCAAAATTGAGTGTTCTCGTACTACTAGCCGTGGTTA TCACATCAAAGAATTGCAAACTGACAGTCTGTTGCCTTTGCGCCCAAACC CTATCGACCAATCTTATCGCGCTGCACAGATACGAGGCACGCAAGGTCTT TGGCTCTTTCCAGGCTTGGGTGGACCGTGTGAACGGCGCGTGGCGGAAGG CTACGCGCCCGGCACGGGTGCCGCTGCCGGACAAGGAGTGGTCCGTGTGC ACTCTGCAGGTGTGTGTGTGTGTGTGTGTGATGTGATGTGCACACAAAAG CACTGTAGTTTGACATCACATCACATCACATAGACACCATCAATGTGTGT GTGTATGCGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGCGCGCGT CTGTGTGCCCGTCTCTGGGTGCATGCGTGCACGCGGGCGTGCGTGAGGGG GCTCATGTGTGTGTGTGTGCGTGTGCGTGTGTGTGTGTGTGCCCGTCTGT GGGTGCATGGGGGCGTGCGCGCGGGCGGGCGGGCGTGAGGGCGTGAACGC GGAAGCGCACACGTTCGCGAGGCGTGTTGCTCGTGTGTGTGTGCGCGCGC GCGTGTGTGTGCGTGCGTGCGTATGTGCTCGTGCGCGCCGGCGCGCGCCA CGGGTGGGGCACTACAGAGCCACCCCGGGGGTCGTGGGGTCTCCATGGCG GTGCGTGGCATCGGCTTGTCCAATGCCCCAAACATGTGCAAGCGCGTGTG CTAGGCGGTGATTAGTATTAATTGTAACGAGGTGCAATCGCACGTGTGTG AGATTGAGTGTTCTCGTATTACTAGCAGTGCTTTAGTTGTCCCATTTAAG AATTGAGCGTTCTCATGTTAGTGATTGTCACATCAAGGGACTGCGTGTGC TAGGCGGAATGACGAGATTTATTCAGCAGTTGGCGTGTGCTGTGGTACGG GCAGTGAGTGCTTGGAAGTGCTTGGTACGGCGCGTGGTATGCGCAGTAGC AGTCGACACAGTCCACGCTTGAGGTTTATCCGTTAACTCGTAGTAGAGGA CCGTTTAACTATTTGTGCGCTTATCCCACACTAGACTCCTGCAGTGTAGT GTAAAAATAGTTAAGTACTGCTGTAGTAGGTTTATCCGCTAACTCGTAGA GGACCGTTTACCTATTTGTGCGCTTATACCACGCTAGACTCCTGCAGTTT AGTGTAAAAATAGTTAAGTACTAGTAGGTTTCTCCGTCAACTCATAGTAG AGGGCTGCTAGCCATTTGCGCGCTCATCCCACACTAGACTCCTGCAGTGT AGTGTAAAATAGTTGAGTAGTACTGTAGTAGGTTTATCCGTTAACTCGTA GTAGAGGGCTGGTAGCTATTTGCGCGCTTATCCCACTCTCGACTCCTGCA GTGTCGTGTAAAAATAGACCCCACGCCCTCAACGGGCTAGCAGAACAACG CAATACCGATGCAGCGTCCCTGCCAAAAACATCGACAGCTCGCCGCCGGT CAGCCGACGTGGCGATAGATGACGCCGATCGATAAGCTCAGCCACAACCG CAAATACGAGAACATTCAATCTCACACACGTGCGCTTGTACCTCGTTACT ATTCATATGAATCAATGCCACAATGGGCTGTTGAGATCAGCTACCGTAAT CGTCGGAGAGATCTTGCCCCCACGGGACAATTTTCGGGGGAACATTTGTA GCCAGGAAGGTCCTGCATTGTCCCAATAGTCCTCGGAACAGTTCCCCCAG GTCCTGAGGGAGATTTTCCGAGTTTTCCCGCGCAAATCCAACCAGTATTC GGCGAGAAGGGTTCTCCCAAATATTGGCATGGGGGGGCAAGATCTCTCCG CCGATTACGGTACTGTATGTGCACCGCATACTGTACATATGCGCAGCACT CGTGCTGGGCAAGTTATGCCGGTGAAATGCCCGGCGTGCTCTGTCCAATA GGACGCGTGGCCAACGGCGAAAGCTACAAACAGCTGGTCAGCGATCCCGC GAGAAGGGAGCAGAGACGAGGATCGTTCGGGTCCAGGGCATGCACAGAGA CGAGAAACCTCTTGTCTGAACATGAGTACTCGTACTCGTACACACTCGTG CTGGGCTTGCGGTATCCCGGAGACAGTCGGCCAGGGTTGGCGCTTAGCCC CTAAGTGGCGCCCTTTTGGGCCCTTAGAGGTCATTAGGGGCAATTAGACC TAAAATGAAGGCTAGTTAGGCCCTAATTGACCCCTCTGTCGACCACGCGT CTCTTCCAGGGTTTGGGAGCGGCCCAAACCTTCATGAGCGCTGTACTGTA AGTAAAACAAGGCACTATGATGATCTTGGGTCCGCGTCCTCCCGCTAAGA GGCATAGTTGGCCCCTACGTCGCGAATGCGGGCACCCAACCGGTAACCGC GGTAGCGGTTAGCGGCATTATAGCGCGGTTACCGCACCGCTCGGTGCGGC GATCGCTCGGTCTCGGTGCACTGAGTCAGTAACCGCGGCAAAAAAAAAAA AAAAAAAACGATGCTAAGTGTTCGTCCATTTCCTCGTTTTTTAACTTTTT TGTATTAAAAAAGCATGTGATCGAGACCCGCGGTTAAGCCCAACTATGCT AAGAATTGTCCGTGCGTTGTTTGTCGACACCCCTCGCCTGCCAGGAGCGC ACCAAGCTGAACAGGAACACCCGGCGGTACATGTTCAAGCTCCCCACGCC GGCATCCGTGCTGCCCTTGGGGCTGGGCCAGCAGATCACGCTGTGCGGGC TGGACCGGGATGACAAGGCGAGTCATGGGAAAGGGTCTCCACGGTCTTTT GCCGCCGTACTCGTACAGTTGTACAGCACCATTGTACTCCGGAGTATGCG CTTGTCATTCAGTGCAGAGTACAGTGCGGTAGCCTTTTCCTAACCAGCCC CAGCCCGGGCTCCGATGACGGGCCTTCCTCCACATTGCATGGCCAGTGAT GGAATATCTACGCAAATCAACCTAACTATCGACAGTACTGATCTACTGTA TATATCTATCGATAGTCGATATTCGATAGTTTGACCCACACTAAAACCAA GTAGTTAGTAACGGCACCCGCAAAATTAGCCGAGCCCGGTACAGTACCTA TCTACTGATCGATATTCCATCAGGTCACCCCTGCGATGTTGATGTGATGT GATGTAAAACTACAAGAAATTAGAGTGCACATCACATCGCATCACATCAT TGCTGATCGATATTCCATCGCTGGGCATGGCAGGTCGTGCAGGGAGGCTT TGTGCCCTCGTTGCGCCGGGACATATCTATCGATAGTCGATATCCGATAC TTTGACCCTCACTAAGTCCGAGTAGTTACTAGCGGCACCCACAATGGGTC AATGGTCTCGGGACTACGGCAAGCACCACGTGAGTACATATATACCCACA AAATCAGCCGAGCCCTGTAACTATCTACTGATGGATATTCCATCACTGCG GCTCACCAGGTTGTGCAGGGAGGGTTCGTGCCCTCGTCGCGCCGGGACGT GCCCGGGTATTTCGAGATCTTGGTGAGCAAGGACGGGGACGCAGACGACG CGCTGCCCGGTGCCAACAGCATTCAGATGGCCAAGCTCCTGGGCAGCATG GCGATAGGTGGGTCGGCAGGGCCGGGATGCCGGGTGTGATTCAATTTTGT TTTATTGGCAATGGTCTCGCAACTATGGCAAGCACCATGTGAGCGCATAT ACTTCGTATATATTGGCGCAGAGGCACGCGGTCAATGGTTTCGTGACTAC GGCAAGCACAGTGTGCGTACATACATACATATGCTATGTACTACGTCGAA GTACTAGCAAAGTGGAGTACAGTCTCACGCCTGGTCGGTGAGAACCCGGT ATACTCCGTCCCGGCATAGTAGGGACGCGAGGCCAATCGCCGAAAGGCTA CCCTGCGGGGGCTGGCCGGCAGTCCAGCAGCTAGTATTGCTGGGCCGACA ATGGACGTCCAATGCACGTCCTCTCCCAGGATGCATGTCGTGTGGTCTCC GTGACGGAAATGTCTGCACCATCTCCATTCACCCACGTGTCCCACGTCGT CTTCATGATGCACATCTACTGTATGTCTGAGATTCTATCTATATAGCACT ACTACGTAGTATTAACCTACTGCTGTACATTATACGGTACAGTGTACAGT GCATACTATATATGTATATGTACTCGCGTGGTGCTTGCCGTAGTCCCGAG ACCATCGACCCCGGGACATCTACTGTGTGTCTGTGATTCAATCTATATAG CTACTACTACGTAGTATTAACCTACTGCTGTATGTTATATGGTACAGTGT ATATATATGTATTCACGTGGTGCTTGCCGTAGTCCCGAGACCATTGACCC CGTGCCTCATGCGAGATGGAGCAGGGGGGGTGTACAGTGCCTACTATATA TATACTTCGAAGTATATATGTACTCACGTGGTGCTTGCCGTAGTCCCGAG ACCATCGACCCCGCGCCTCAGAGCAGGCGTACTACAATACCTACTGCAGT ACACTGCCCCTAGCCCTTGAACCCGTTGGAACATGTCACCTCACGGTGTA CGCCATGTATTAGCCCCGTTTACCTGGCAGTGACAAGGCCTGGGGCCTTG TGTGCTGACTATGGAGCAAGATGTAGCTGGAATCCCTAAGGTGGAATACA GGGAGCAAGAGACTCTCCTAGACTGTGTGCTACAAGGGGTTGTAGAGTCA ATGGATACAGATGTTCTGACACATTCCCTCGACACAAGTGGCGATTGGCG TTCTCATGCAACGTTCCCTCGACAATGCAACTGTGGTGGTCGAGAACACA AAAGAATGCTACGTAAGGAGTGCGTGATAAGGAGCACAAAGGAATGTAAC ATAGGGATTGCGGAGGGGCCGTGTGGCCACTCGTCTGTAGGTGGATCAAG CCTGTATACAGTGGGCTGCAGGTACACAACATGTACCAGAAAACAATGAC ATCGTCTGTGGGCCACAGGTGGCGCGTGCTCGCGTGGACACGCGGTCTAG TGCATATAGCTATTCCTGCGTGTGCAGTGTATAGCAGCCCGCGTGTGCAG GTGCGTACTAGAGCTGATCAGCGTGTACTGCGTGCGCAGTGGGCACTGGA GCCAGTGTATACTGCGTGTGCAGTGTGTACTGGAGTCGGTCCAGTGCATG TGGCATGTCTGCAAGTGGCACTAGTAACCTACACCCGGAGGCGGTGCTAA GGAGCACTAGGAACCTACGCCCGGAGGCGGCGCCTGGGGAGGTGCGTTGG GGAATGCAAGGGAAACGCAAGGGACACTAAGGCTAGTGTGCAACCGCGCA CCCGTGTGCGAAAGGGTGTCACCTGGGTAGGCGGGCGGTAAGGGGAAATG GGAACGGGACTCACGAACTATGCGCGGCACGGCGGGGGCGGACCCCTGGC CGCAGGAAGGGAGGGCGGAGGCAGGCCGATGGTGCCGATGTCGTAGCGAC AGGGCTGGACATGGAGAGGGGCGTACCCGTACGATGGTGCCATGGATGCT GGTGTCAACGAGGGTGTGGCCCATGACCGCGTAGGCGGTCTGGTGCCGAC AGCTCGGTGGCGGGCTGCAGTGGCCGGTGCCTGGTGCCAGGTATCCGGCA TCCATGAGGGAGGCGATGATGGGGAACGACTCGATCGGTAGCGCAGTCGC GTCCGGGGCGGGAGGCGTGGTGCCGGGGATGGGCGATGTGGTCGTTGCCG TGGCGGTTGCCGTGGCTGAACCTAGTGTCCGACGGTCAGGGCTGGTATGC CCTGCTCGGGGGCTCCCGGTCGCCACGTCCTCGGAGGACATACCGTCGTA CCTAATCGCATGCGCCCAGGTGCGAACCGGCATGCACCTAAACGTGTGGG ATGACCGCGAGGTCATAGCCAGGGCTCATAGCCTGTTGGAACATGTCGCG TCATGGTGTACGCCGTGTATTGGCCCCGTTAACCTGGCAGTGACAAGGCC TGGGGCCTTGTGTGCTGACTATGGAGGAAGATGTAGCTGGAATCCCTAAG GTGGAATACAGGGAGCAAGAGACTCTCCTAGACTGTGTGCTACGAGGGGT TGTAGAGAGTCTTGTATGAGGGGACAAGATGCCATGTGTGTCGTAATAAA CATCATGGATACAGATGTTCTGACACATTCCCTCGACACAAGTGGCAATT GGCGTTCTCATGCAACGTTCCCTCGACAGTGCAACTGGTGGTCGAGAACA CAAAAGAATGCTACGTAAGGAGTGCATGATAAGGAGCACAAAGGAATGCA ACGTAAGGATTGCGGAGGGGCCGTGTGGCCACTCGTCTGTAGGTGGATCA AGCCTGTATACAGTGGGCTGCAGGTAATGCAACATATACCAGAAAACAAC GACATCGTCCGTGGGCCACGTGTGGCACGTACTTGCGTGTACAGGCAGTC TAGTGCACATAGCTATTCCTGCGTGTGCAGTGTATAGCAACCCGCGTGTG CAGGTGCGTACTAGAGCTGATCAGCGTGTACTGCGTGCACAGTGGGCACT GGAGCCAGTGTATACTGTGTGTGCAGTGTGTACTGGAGTCCGTCCGGTGC ATGTGGCGTGTCTGCAAGTGGCACTAGTAACCTACACCCGGAGGCGGTGC TAAGGAGCACTAGGAACCTATGCCCGGAGGCGGTGCCTGGGGAGGTGGGT TGGGGAATGCAAGGGAAACGCAAGGGACACTAAGGCTAGTGTGTAACCAC GCACCCGTTTGCGAAAGGGTGTCGCCTGGGTAGGCGGGCGGTACGGGGAA ATGGGAAGGGAACGGCTAACGAACTACGCGCGGCACGGCGGGGGCGGACC GCTGGCCGCAGGAAGGGAGGGCGGAGGCAGGCCGATGGTGCCGATGTCGT AGCGACGGGGCTGGACATGGAGAGGGGCGTACCCGTACGATGGTGCCATG GATGCTGGTGTCAACGAGGGTGTGGCCCATGACCGCGTAGGCGGTCTGGT GCCGACAGCTCGGTGGCGGGCTGCAGTGGCCGGTGCCTGGTGCCAGGTGT CCGGCGTCCACGAGGGAGGCGGGGAACGGCTCGATCAGTAGCGCGGTCGC GTCCTCGCGTCCGGGGCGGGAGGCGTGGTGCCCGGGATGGGCGATGTGGT CGTTGCTGTGGCGGTTGCTGTGGCTGAACCTAGTGTCCGACGGTCAGGGC TGGTATGCCCTGCTCGCGGGCTCCCGGTGGCCGTGTCCTCGGAGGACATA CCGTCGTACCTAATCGCGTGCGCCCGGGTGCGAACCGGCATGCACCTAAA CGTGTGGGATGACCGCGAGGTCATAGCCAGGGCTCATAACCTGTTGGAAC ATGTCGCCTCATGGTGTACGCCGTGTATTGGCCCCGTTAACCTGGCAGTG ACAAGGCCTGGGGCCTTGTGTGCTGACTATGGAAAATGTAGCTGGAATCC CTAAGGTGGAATACAGGGAGCAAGAGACTCTCCTAGACTGTGCTACGAGG GGTTGTAGAGAGCCTTGTATGAGGGGACAAGATGCCATGTGTGTTGTAGT AAACATCATGGATACAGATGTTCTGACAAAACCCTAACAACCTAACCCTA GCCCAAACCTCCCTCCAATTCTATCCAGGGGACGAGATGGCCTGCAAGCC TGGGCGGTCGGGGATGGTGTACCGAGGGCCCTACTACAATGCCTACACTG CCCCTAGCCCTAACCCTAATACAGCCTAACCCTATCCCCTAACCCTAACC CTAGCCCAAACCTCTGCGATTCGACTTATCCAGCGGATAAGATGGCCTGC AAGCCTGGACGGTCGGAGATGGTGTCCAGCACCTACTACAGTACCTACAC TGCCCCTAACCCTAAACCCTAGTGACCTACTCGAGTACCCCTAACCCTAA CCCAAACCTCTGCAATTGTATCCAGGGGTCGAGGTGGCCTGCAAGCCCGG ACAGTCGGGGATGGTGTACCGAGGGCCCTACTACAGTACCTACACTGCCC CCAACCCTAAACCTTAATAACCCAACCCTATCCCCTAACCCTAACCAAAC CTCTGCGATTCTACTTATCCAGGGGACGAGATGGCCTGCAAGCCCGGACG GTCGGGGATGGTGTACCGAGGGCCCTACTCCCCCATCACCGACGTCGTGC TCGTGGCCACGGGGCTCGGCATCGTGCCCATGCTTCAGCTGGTCAATGAG CTGCTCCCGGCGCACGACACCTCTGTCGACACTGCCACAGGTGCCCCTTC TCTATTGCTTCGAAGTACTTCGGAAGTGCGTTTACTTTGTGCGAGGTCGA TGAGCTGCTCCCGGCACACGACACCTCCGTCAACGCTGCTACAGGTGCCC CTTCTCTATTTCTTCCAGTACTGATAACCACTAATACGAAGACCACTCAA TTCTTAAATGGGATGACCTCTTCTTTCCCAGTCGCTGCTTATCTTCATGC CGGAAAAAAAATGGGATGACCACTACAGTAATACAAGAGCACTCAATCTC ACACATGTGCGATTGTACCTCGTTACAATATATTTGAGTGGTAGAGAAGC GGCGAGTTCCAGGCCCCGTGCCAAAAGGCTCGTCCCAACACGTTGCAGCT TCCAAGTATATGAATCCCCCCCTCCCCCCCAGTGTGATAGTTGTCTGGGT GAACGAGCACGCAGAGGACTTTGTGCTGTACCGTGAGGTGGAGAAGGCCT TCTACAAGAACCACAAGAAGCTCGACGTCGCCTGCATACTGGAGAGTGAC ACTCACGCACGTATTTCACTGCCACGACCCCCGCCCCCTTAGTGGTCTGG GTGAACGAGCACACCGAGGACTTTGTGCTGTACCGGGACGTGGAGAAGGC CTTCTACAAGAACCACAAGAAGCTTGACGTGGCCTGCATACTGGAGAAGG ACATGTTCGGACACCAGCTGGCGGCGAATCCTCGCGTGGTCGAGGCCGTG CCGGACTTCAGGATCGGGACGCTGGCGGCTGTGTCGGGTGCGTACTTCGG GAAGTAACTACTGTACATCAGATTGACTATTATGTACTTCGAAGTACTAT GAACTATGCCAGCACTCGTACTATGCCTACTACCTACAGTACTTAGGCGT ACATCGCAGTAGTACAGCACCCATACTCGTATCGTACAGGAAACATGCTC AGTATGTCGCGGTGTGTGTGTGTGTGTGTGCGTGCGTGTGTGCGTGTTTT TGTGAGTGTGCTCGCGTGTAAGTATTGCGCGTACAATGTGTGTGCGCATG TGTGCGCACGCACGTGCTTGTAGGGGTATGTCACATGTGTTGTTGTGTGC ATGTTCGCACGCGTGTGTTTGTGTGCATGGTGGTGCCGTTTGGCTATGTG CACGCGTGCGCGCGTGTGTGTGCACGTGTGCATGGTGTTCTTACGTGCGT GTGTGCGCACACTTGTATATCCATGCGTGCGTGCATGCATTCGTTCGTTC GTTCATTTTCGAGCGAGTACTTCAAACCATACCTTCACTCTGCCCCCCCG CCCGCCCCCCCCCCTCCACGGCCTTCCTCCCTCCACCCCCACGGCAGGGC CCGAGTACTTTGTCCGGAAGGTGCAAGACTACTTGAGCCGCCGTGGCTAC CCGGACGACGTGATTATATCCCTATAGGAGCCGGAGTACTATGTCTCGTA CGTGCTCCGTCCAATAGGAATCGTGGCCAATGGCTTCGGCTACAGCTGGC CAGCAATCTACGAGAAGGAGCAAAGACGAGGATCGTTCGGGTCCAGGGCA CGTACAGAGACGCGAGTACACACACTTCTCCGTCTCGACCGAGGCGGGTG CGTGGTCAATGGTCTCGGGGCTACGGCAAGCACCACGTGAGTACATGTGC TGGGTGTCACCACCATGCCATACACACAGCACCGCCCCCGCGGACCGCGA ATGCCGGCCACCACCACCGCCACAGCTGCGGCCAGCCAACGTGGGCCGAA GAGGGCCGAAGAAGTTCATCTTCCCTGCCCAACCCTCCCCCCCGGGGGCG GCGGCGGCGGCGCGGGCGCGGCAAATGCGTGGGGGAGGTGTGCGGCAGAG GAACGAGGGACTGCTCGGGGCGAGATCTCCCTCGCGCCGCGCAAACATAG GTTCTGGCGGCGGCGGCGGTGGGGTGACCGCGTTGTGTTCGATGTGAACC GTGTGCCTGCCCGGCTCCTCGCCCGGGGAGCGGGTGCAGCCTCTCCGATC GTCGAGCCCCCGGGACCCATTGTTTTGCTGCAGCGTATAGAGTACAGTAA TATTTTAATGTGGGGGCAGGAGGCGAGCGAACCGGGTCGGGTCGGGCCTA AAAGGGGGGAG
back to top

Coding sequence (CDS) from alignment at S-ischiensis_contig9:1798463..1811523-

>mRNA_S-ischiensis_contig9.20600.1 ID=mRNA_S-ischiensis_contig9.20600.1|Name=mRNA_S-ischiensis_contig9.20600.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1836bp|location=Sequence derived from alignment at S-ischiensis_contig9:1798463..1811523- (Schizocladia ischiensis KU_0333)
ATGATGGGCAGCGGCAGCAACGGTGCCCCCTTTAGCAGAAGCAGCCGCCT
CCCCAAGGCAGTGAAGGACGTCAGATGATGGGCAGCGGCAGCAACGGTGC
CCCCTTTAGCAGAAGCAGCCGCCTCCCCAAGGCAGTGAAGGACGTCAGAT
ACGAGGCACGCAAGGTCTTTGGCTCTTTCCAGGCTTGGGTGGACCGTGTG
AACGGCGCGTGGCGGAAGGCTACGCGCCCGGCACGGGTGCCGCTGCCGGA
CAAGGAGTGGTCCGTGTGCACTCTGCAGATACGAGGCACGCAAGGTCTTT
GGCTCTTTCCAGGCTTGGGTGGACCGTGTGAACGGCGCGTGGCGGAAGGC
TACGCGCCCGGCACGGGTGCCGCTGCCGGACAAGGAGTGGTCCGTGTGCA
CTCTGCAGGAGCGCACCAAGCTGAACAGGAACACCCGGCGGTACATGTTC
AAGCTCCCCACGCCGGCATCCGTGCTGCCCTTGGGGCTGGGCCAGCAGAT
CACGCTGTGCGGGCTGGACCGGGATGACAAGGAGCGCACCAAGCTGAACA
GGAACACCCGGCGGTACATGTTCAAGCTCCCCACGCCGGCATCCGTGCTG
CCCTTGGGGCTGGGCCAGCAGATCACGCTGTGCGGGCTGGACCGGGATGA
CAAGGTTGTGCAGGGAGGGTTCGTGCCCTCGTCGCGCCGGGACGTGCCCG
GGTATTTCGAGATCTTGGTGAGCAAGGACGGGGACGCAGACGACGCGCTG
CCCGGTGCCAACAGCATTCAGATGGCCAAGCTCCTGGGCAGCATGGCGAT
AGGTTGTGCAGGGAGGGTTCGTGCCCTCGTCGCGCCGGGACGTGCCCGGG
TATTTCGAGATCTTGGTGAGCAAGGACGGGGACGCAGACGACGCGCTGCC
CGGTGCCAACAGCATTCAGATGGCCAAGCTCCTGGGCAGCATGGCGATAG
GGGACGAGATGGCCTGCAAGCCCGGACGGTCGGGGATGGTGTACCGAGGG
CCCTACTCCCCCATCACCGACGTCGTGCTCGTGGCCACGGGGCTCGGCAT
CGTGCCCATGCTTCAGCTGGTCAATGAGCTGCTCCCGGCGCACGACACCT
CTGTCGACACTGCCACAGGGGACGAGATGGCCTGCAAGCCCGGACGGTCG
GGGATGGTGTACCGAGGGCCCTACTCCCCCATCACCGACGTCGTGCTCGT
GGCCACGGGGCTCGGCATCGTGCCCATGCTTCAGCTGGTCAATGAGCTGC
TCCCGGCGCACGACACCTCTGTCGACACTGCCACAGTGGTCTGGGTGAAC
GAGCACACCGAGGACTTTGTGCTGTACCGGGACGTGGAGAAGGCCTTCTA
CAAGAACCACAAGAAGCTTGACGTGGCCTGCATACTGGAGAAGGACATGT
TCGGACACCAGCTGGCGGCGAATCCTCGCGTGGTCGAGGCCGTGCCGGAC
TTCAGGATCGGGACGCTGGCGGCTGTGTCGGTGGTCTGGGTGAACGAGCA
CACCGAGGACTTTGTGCTGTACCGGGACGTGGAGAAGGCCTTCTACAAGA
ACCACAAGAAGCTTGACGTGGCCTGCATACTGGAGAAGGACATGTTCGGA
CACCAGCTGGCGGCGAATCCTCGCGTGGTCGAGGCCGTGCCGGACTTCAG
GATCGGGACGCTGGCGGCTGTGTCGGGGCCCGAGTACTTTGTCCGGAAGG
TGCAAGACTACTTGAGCCGCCGTGGCTACCCGGACGACGTGATTATATCC
CTATAGGGCCCGAGTACTTTGTCCGGAAGGTGCAAGACTACTTGAGCCGC
CGTGGCTACCCGGACGACGTGATTATATCCCTATAG
back to top