prot_S-ischiensis_contig9.20544.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig9.20544.1
Unique Nameprot_S-ischiensis_contig9.20544.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length354
Homology
BLAST of mRNA_S-ischiensis_contig9.20544.1 vs. uniprot
Match: D8LFK7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFK7_ECTSI)

HSP 1 Score: 85.9 bits (211), Expect = 7.430e-15
Identity = 95/314 (30.25%), Postives = 136/314 (43.31%), Query Frame = 0
Query:   47 KLTLTYTDAEGDDVTFDTDAELALAVRTCSSPLRVTVK--------------CQGTAPQTQATAADAMD-------------------EDDADIVLLDAEDEEMGRSDNDPVSGTTTADQXXXXXXXXXXXX-----EAEASKSPEASPLFKRAARRLGRVHSVDITPTQLAAALTLLQLRPRVLAKRGLAPARFLRAGAAGGEATSSDAEEDVDKDSKDKKSTEEASAQPEPSGVRAAARPCPEGRGHCGHRGGHRHGPGGRVPPMGPVAVAFWKNGIELAPPQVRALLRALGVGPRRLVKVGLLDMNTLRSL 322
            +LT TY D EGD+V FDT+AEL LA+RT S PLR+ V                  + P  +AT+A                        DDAD++++D   E    +   P  G+    Q                 EA A++ PE S L+++++ RL +   V +TPTQL   + L Q++ R L   GLAP R L       +A++S A  DVD       S++E   + +PS VR   R   +                 R      V      NG+EL   +V+ LL+AL V  RRLV++GLL    L  +
Sbjct:   13 QLTFTYKDNEGDEVRFDTNAELDLALRTSSVPLRIMVANPXXXXXXXXXXXXXXRSTPNPEATSAAPPSIPSTPGYAVASNVGSVVGGGDDADMIMVDMPGEAAAAAAAGPSGGSVDGSQADGPEKEAINPQAAFEAEAAAARDPEGSLLYQKSSMRLAKRFKVHLTPTQLWRVMALFQIQGRQLVVFGLAPHRSL-------DASASAAASDVD-------SSDEEGGENKPSAVRGLKRSKSQVA---------------RTIVADHVQRLLILNGVELPGDEVQPLLQALRVRSRRLVRLGLLGPEFLEDM 297          
BLAST of mRNA_S-ischiensis_contig9.20544.1 vs. uniprot
Match: A0A6H5JTZ0_9PHAE (PB1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTZ0_9PHAE)

HSP 1 Score: 84.0 bits (206), Expect = 5.320e-14
Identity = 102/355 (28.73%), Postives = 151/355 (42.54%), Query Frame = 0
Query:    6 VIKTNMGENKRMVELGSASAAASFAELEKAIRLTYE--TSPNDKLTLTYTDAEGDDVTFDTDAELALAVRTCSSPLRVTVK----------CQGTAPQTQATAADAMD-------------------EDDADIVLLDAEDEEMGRSDNDPVSGTTTADQXXXXXXXXXXXX-----EAEASKSPEASPLFKRAARRLGRVHSVDITPTQLAAALTLLQLRPRVLAKRGLAPARFLRAGAAGGEATSSDAEEDVDKDSKDKKSTEEASAQPEPSGVRAAARPCPEGRGH--CGHRGGHRHGPGGRVPPMGPVAVAFWKNGIELAPPQVRALLRALGVGPRRLVKVGLLDMNTLRSL 322
            ++K  +  + R++E+ +      F EL K +   Y        +LT TY D +GD+V FDT+AEL LA+RT S PLR+ V              + P  +AT+A                        D+ D++++D   E    +   P  G+    Q                 EA A++ PE S L+++A+ RL +   V +TPTQL   + L Q++ R L   GLAP R L A AA        A  D+D       S++E   + +PS VR   R   +  G     H                 V      NG+EL   +V+ LL+AL V  RRLV++GLL    L  +
Sbjct:    4 LVKIKLDGDLRIMEIPNPPR---FDELVKTVMDAYSMPAGVEQQLTFTYKDNDGDEVRFDTNAELDLAIRTSSVPLRIMVANPPXXXXXXXXSRSTPNPEATSAAPPSIPSTPGYAVASNVGSAVGGGDEPDMIMVDMPGEAAAAAAG-PSGGSVDGSQADGPEKEAINPQAAFEAEAAAARDPEGSLLYQKASMRLAKRFKVHLTPTQLWRVMALFQIQGRQLVVFGLAPHRSLDAAAA--------AASDLD-------SSDEEGGENKPSAVRGLKRSKSQVAGTIVADH-----------------VQRLLGLNGVELPEDEVQPLLQALRVRSRRLVRLGLLGPEFLEDM 322          
BLAST of mRNA_S-ischiensis_contig9.20544.1 vs. uniprot
Match: A0A6H5KVV7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVV7_9PHAE)

HSP 1 Score: 56.6 bits (135), Expect = 3.320e-5
Identity = 59/170 (34.71%), Postives = 75/170 (44.12%), Query Frame = 0
Query:  158 LFKRAARRLGRVHSV-DITPTQLAAALTLLQLRPRVLAKRGLAPARFLRAGAAGGEATSSDAEEDVDKDSKDKKSTEEASAQPEPSGVRAAARPCPEGRGHCGHRGGHRHGPGG---RVPPMGPVAVAFWKNGIELAPPQVRALLRALGVGPRRLVKVGLLDMNTLRSLR 323
            L+K  AR L   H V  +T   L   + LL+LRP  L  +GLAP + L+  +A      +DA  D   DS     +E    Q + + V           G   H    +H   G         PV  A    GI L P + R LLRALGVGP RLVK+GL+    LR  R
Sbjct:   26 LYKATARNLREYHGVPSMTADNLEKTMVLLRLRPGRLVVQGLAPEKLLKGFSA------ADAHADTT-DSSGSSGSEVEPEQADDNQVSDDXXXXXXXSGDTEHDNIRKHNSLGFETNKRSKHPVHAALVAAGITLRPRETRPLLRALGVGPHRLVKLGLVQREELRRSR 188          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig9.20544.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LFK7_ECTSI7.430e-1530.25Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JTZ0_9PHAE5.320e-1428.73PB1 domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KVV7_9PHAE3.320e-534.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.20.90coord: 7..85
e-value: 1.0E-9
score: 40.1
NoneNo IPR availableSUPERFAMILY54277CAD & PB1 domainscoord: 1..75
IPR000270PB1 domainPFAMPF00564PB1coord: 7..84
e-value: 6.0E-8
score: 32.5
IPR000270PB1 domainPROSITEPS51745PB1coord: 4..86
score: 14.659

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig9contigS-ischiensis_contig9:1229653..1230714 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig9.20544.1mRNA_S-ischiensis_contig9.20544.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig9 1229375..1230714 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig9.20544.1 ID=prot_S-ischiensis_contig9.20544.1|Name=mRNA_S-ischiensis_contig9.20544.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=354bp
MSNSIVIKTNMGENKRMVELGSASAAASFAELEKAIRLTYETSPNDKLTL
TYTDAEGDDVTFDTDAELALAVRTCSSPLRVTVKCQGTAPQTQATAADAM
DEDDADIVLLDAEDEEMGRSDNDPVSGTTTADQGDSDNGPVSAAAEAEAS
KSPEASPLFKRAARRLGRVHSVDITPTQLAAALTLLQLRPRVLAKRGLAP
ARFLRAGAAGGEATSSDAEEDVDKDSKDKKSTEEASAQPEPSGVRAAARP
CPEGRGHCGHRGGHRHGPGGRVPPMGPVAVAFWKNGIELAPPQVRALLRA
LGVGPRRLVKVGLLDMNTLRSLRAFRLGWQAAAHAHGARAGRHCGGRGGG
GGGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000270PB1_dom