prot_S-ischiensis_contig9.20392.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig9.20392.1
Unique Nameprot_S-ischiensis_contig9.20392.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length211
Homology
BLAST of mRNA_S-ischiensis_contig9.20392.1 vs. uniprot
Match: D8LN43_ECTSI (DIS3-like exonuclease 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN43_ECTSI)

HSP 1 Score: 186 bits (471), Expect = 1.220e-50
Identity = 104/201 (51.74%), Postives = 131/201 (65.17%), Query Frame = 0
Query:    1 PVVWFGRTVIHSVAAMTYDQADSLIHHGKVLEPPGFTRPPPGQAGAPVPTSLQPGLAHDLRLLTEFSRNCGRERVSSGAMDLTRDGGELKFKLDPDTGAPLKVEAKAEVEVNHTIAELMILANSAVAQQIHKHFPSAALLRVHAAASEDRLAPLVAAARALGVHLETAT---PKALSTSLKRAETIVINRA--GLGPGGKA 196
            PV WFGRTVIHS A+MTYDQA  L+  G++ +  G   PP GQAG  V   LQPGLAHDLRLLT F+R    ERV +GA+DL++ G ELKFK+DP TG PL V  K + E++HTIAELMILANSAVA++I   FPS AL+RVHA+    RL      A  +GV+  + +   P + +  L ++   V   A  G G GGK+
Sbjct:  687 PVCWFGRTVIHSKASMTYDQAQMLVEDGRIEKKKGHEEPPSGQAGRDVREGLQPGLAHDLRLLTRFARTARAERVRNGAIDLSQAGAELKFKIDPVTGTPLAVAGKEDSEIHHTIAELMILANSAVAEKIQGAFPSQALVRVHASPDPSRLTAFEGVAAKVGVNSTSESSGKPNSSAGGLSQSLATVEGGALRGQGEGGKS 887          
BLAST of mRNA_S-ischiensis_contig9.20392.1 vs. uniprot
Match: A0A6H5JSW4_9PHAE (DIS3-like exonuclease 1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSW4_9PHAE)

HSP 1 Score: 177 bits (449), Expect = 1.130e-47
Identity = 101/200 (50.50%), Postives = 129/200 (64.50%), Query Frame = 0
Query:    2 VVWFGRTVIHSVAAMTYDQADSLIHHGKVLEPPGFTRPPPGQAGAPVPTSLQPGLAHDLRLLTEFSRNCGRERVSSGAMDLTRDGGELKFKLDPDTGAPLKVEAKAEVEVNHTIAELMILANSAVAQQIHKHFPSAALLRVHAAASEDRLAPLVAAARALGVHLETAT---PKALSTSLKRAETIVINRA--GLGPGGKA 196
            V WFGRTVIHS A+MTYDQA  L+  G++ +      PPPGQAG  V   LQPGLAHDLRLLT F+R    ERV +GA+DL++ G ELKFK+DP TG PL V  + + E++ TIAELMILANSAVA++I   FPS AL+RVHA+    RL      A  +GV+  + +   P + +  L ++   V   A  G G GGK+
Sbjct:  282 VCWFGRTVIHSKASMTYDQAQMLVEDGRIDKKRRHEEPPPGQAGRDVREGLQPGLAHDLRLLTRFARTARAERVRNGAIDLSQAGAELKFKIDPVTGTPLAVAGQEDSEIHDTIAELMILANSAVAEKIQGAFPSQALVRVHASPDPSRLTAFEGVAAKVGVNSTSESSGKPNSSAGGLSQSLATVEGGALRGQGEGGKS 481          
BLAST of mRNA_S-ischiensis_contig9.20392.1 vs. uniprot
Match: A0A836CJZ0_9STRA (DIS3-like exonuclease 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJZ0_9STRA)

HSP 1 Score: 172 bits (435), Expect = 2.880e-46
Identity = 98/178 (55.06%), Postives = 122/178 (68.54%), Query Frame = 0
Query:    5 FGRT-VIHSVAAMTYDQADSLIHHGKVLEPPGFTRPPPGQAGAPVPTSLQPGLAHDLRLLTEFSRNCGRERVSSGAMDLTRDGGELKFKLDPDTGAPLKVEAKAEVEVNHTIAELMILANSAVAQQIHKHFPSAALLRVHAAASEDRLAPLVAAARALGVHLETATPKALSTSLKRAE 181
            FG+  VI SVAAMTYDQA +LI  G++ + P     PPGQAGAPVP  L P L+ DL+LLT F+R   ++R  SGA+DLT+  GELKFKL P TG P+ V AKAE+E+NHTIAELMILAN  VA+ + + FPSAALLR HA     RL  L   A A G+ +E  +  AL  SL+R++
Sbjct:  215 FGQNLVIRSVAAMTYDQAHTLITKGRISDQPPV---PPGQAGAPVPPDLHPPLSGDLKLLTLFARWLRQQRSESGALDLTKAEGELKFKLHPVTGLPVAVTAKAELEINHTIAELMILANRTVAETVLRAFPSAALLRTHAPVQASRLGLLQEVAAAAGISVEVGSGGALQASLERSQ 389          
BLAST of mRNA_S-ischiensis_contig9.20392.1 vs. uniprot
Match: A0A7S2EK82_TRICV (DIS3-like exonuclease 1 (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EK82_TRICV)

HSP 1 Score: 140 bits (353), Expect = 1.830e-38
Identity = 84/180 (46.67%), Postives = 111/180 (61.67%), Query Frame = 0
Query:    4 WFGRTVIHSVAAMTYDQADSLIHHGKVLEPPGFTRPPPGQAGAPVPTSLQPGLAHDLRLLTEFSRNCGRERVS-SGAMDLTRD--GGELKFKLDPDTGAPLKVEAKAEVEVNHTIAELMILANSAVAQQIHKHFPSAALLRVHAAASEDRLAPLVAAARALGVHLETATPKALSTSLKRA 180
            W+GRTVIH+ AAMTYDQAD ++  GK  + P  + PPP  AG PV  +L P L  DL +LT  +R    +R +  GA+DL+    G ELKF LD D G P +V  K E E++ T+AELMILAN  VA +IH  FP  +LLRVH A   DR   L AA ++ G+  +    ++L+ SL+ A
Sbjct:   12 WYGRTVIHNCAAMTYDQADRILQ-GKSPDDPRQSPPPPLTAGGPVDATLVPSLRKDLGILTRLARKLRNDREAIGGAVDLSSGDRGSELKFTLD-DNGNPTRVVPKTEREIHRTVAELMILANGCVATRIHGAFPDVSLLRVHGAVDGDRFEDLEAALKSGGLRFDGRDNRSLARSLRDA 189          
BLAST of mRNA_S-ischiensis_contig9.20392.1 vs. uniprot
Match: A0A7S4R116_9STRA (DIS3-like exonuclease 1 n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4R116_9STRA)

HSP 1 Score: 137 bits (345), Expect = 9.630e-34
Identity = 83/184 (45.11%), Postives = 116/184 (63.04%), Query Frame = 0
Query:    4 WFGRTVIHSVAAMTYDQADSLIHHGKVLEPPGFTRPPPGQ---AGAPVPTSLQPGLAHDLRLLTEFSRNCGRERVS-SGAMDLTRD--GGELKFKLDPDTGAPLKVEAKAEVEVNHTIAELMILANSAVAQQIHKHFPSAALLRVHAAASEDRLAPLVAAARALGVHLETATPKALSTSLKRAE 181
            WFGR++IH+VAAMTY QA +++H+    +PP            AG+PV T L P L  DL +LT+ +R   + R    GA+DL+    G ELKF LD + G P KV AK E+E++HTIAELMI+AN  VA +IH HFPS++LLR H    ++R   L +A +A GV  +  +  AL+ SL++A+
Sbjct:  279 WFGRSIIHNVAAMTYQQAHNILHN----KPPDXXXXXXXXXLTAGSPVDTKLIPSLKKDLTILTKLARILRKNREEIGGAVDLSSGDRGSELKFSLD-ENGLPTKVVAKTEMEIHHTIAELMIMANGHVASKIHGHFPSSSLLRNHRTVEQNRFEDLESAFKAGGVSFDGRSNMALAESLRQAK 457          
BLAST of mRNA_S-ischiensis_contig9.20392.1 vs. uniprot
Match: A0A7S4MYR8_9STRA (Hypothetical protein (Fragment) n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MYR8_9STRA)

HSP 1 Score: 133 bits (334), Expect = 2.150e-32
Identity = 84/181 (46.41%), Postives = 106/181 (58.56%), Query Frame = 0
Query:    3 VWFGRTVIHSVAAMTYDQADSLIHHGKVLEPPGFTRPPPGQAGAPVPTSLQPGLAHDLRLLTEFSRNCGRERVS-SGAMDLTRD--GGELKFKLDPDTGAPLKVEAKAEVEVNHTIAELMILANSAVAQQIHKHFPSAALLRVHAAASEDRLAPLVAAARALGVHLETATPKALSTSLKRA 180
            VW+GR+VIH+ AAMTYDQAD ++      E  G    PP  AGAPV  +L P L  DL +LT+ +R     R    GA+DL+    G ELKF LD D G P +V  K E E++ TIAELMILAN  VAQ+IH  FPS ALLRVH     DR   L    +  G+  +  +  AL+ +L+ A
Sbjct:  425 VWYGRSVIHNCAAMTYDQADRILRDLSPEED-GAPAVPPLTAGAPVDRALVPALKRDLSVLTDLARTLRESREDLGGAVDLSSGDRGSELKFALDDD-GNPSRVRPKTEREIHRTIAELMILANRYVAQRIHDAFPSCALLRVHRTVDPDRFEELEGMMKGGGMRFDGRSNMALARTLRTA 603          
BLAST of mRNA_S-ischiensis_contig9.20392.1 vs. uniprot
Match: A0A1W0A8G9_9STRA (DIS3-like exonuclease 1 (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A8G9_9STRA)

HSP 1 Score: 132 bits (331), Expect = 7.410e-32
Identity = 80/180 (44.44%), Postives = 106/180 (58.89%), Query Frame = 0
Query:    5 FGRTVIHSVAAMTYDQADSLIHHGKVLEPPGFTRPPPGQAGAPVPTSLQPGLAHDLRLLTEFSRNCGRERVSSGAMDLTRDGGELKFKLDPDTGAPLKVEAKAEVEVNHTIAELMILANSAVAQQIHKHFPSAALLRVHAAASEDRLAPLVAAARALGVHLETATPKALSTSLKRAETIV 184
            F +T++HSVAAMTY QAD LI      +P      P G AG PV   LQP L  DL LLT  +R    +R + GA+DL++ G ELKF L  +  +  K+  K  +E++ TIAELMILANS VA+++ + FP  ALLR H   S DR   L+  A   G+ L+T +   L +SL R E+ V
Sbjct:  603 FAKTIVHSVAAMTYQQADLLILGLPADDPSSNAVVPEGTAGHPVDGELQPLLKKDLTLLTAIARGLYAKRAAGGAVDLSQRG-ELKFSLSGENESDWKIGVKQALEIHSTIAELMILANSTVAERLVRFFPETALLRRHVPPSGDRFEQLLTLATTQGLTLDTTSNMTLQSSLVRIESTV 781          
BLAST of mRNA_S-ischiensis_contig9.20392.1 vs. uniprot
Match: A0A6G0XVG1_9STRA (DIS3-like exonuclease 1 n=2 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XVG1_9STRA)

HSP 1 Score: 128 bits (322), Expect = 1.200e-30
Identity = 75/173 (43.35%), Postives = 105/173 (60.69%), Query Frame = 0
Query:    5 FGRTVIHSVAAMTYDQADSLIHHGKVLEPPGFTRPPPGQAGAPVPTSLQPGLAHDLRLLTEFSRNCGRERVSSGAMDLTRDGGELKFKLDPDTGAPLKVEAKAEVEVNHTIAELMILANSAVAQQIHKHFPSAALLRVHAAASEDRLAPLVAAARALGVHLETATPKALSTSL 177
            F ++++HSVAAMTY QAD L+      +P       PG AG P+ + LQP L +DL +L    R    +R   GA+DL++ GGELKF  D D    L+V  KA +E++ TIAELMILANS VAQ++ + FP +A+LR H   S +R   L+  A + G+HL+ ++   L  SL
Sbjct:  585 FTKSILHSVAAMTYGQADRLLAGLSADDPAVANTVGPGTAGQPIDSKLQPRLGNDLTILRSIGRKLLNQRTLQGAVDLSK-GGELKFSTDDD--GELRVGTKAALEIHSTIAELMILANSTVAQRLVETFPQSAMLRRHVPPSGNRFDQLIELAASQGIHLDPSSNMTLQQSL 754          
BLAST of mRNA_S-ischiensis_contig9.20392.1 vs. uniprot
Match: A0A485L742_9STRA (DIS3-like exonuclease 1 n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L742_9STRA)

HSP 1 Score: 127 bits (320), Expect = 2.240e-30
Identity = 78/174 (44.83%), Postives = 104/174 (59.77%), Query Frame = 0
Query:    4 WFGRTVIHSVAAMTYDQADSLIHHGKVLEPPGFTRPPPGQAGAPVPTSLQPGLAHDLRLLTEFSRNCGRERVSSGAMDLTRDGGELKFKLDPDTGAPLKVEAKAEVEVNHTIAELMILANSAVAQQIHKHFPSAALLRVHAAASEDRLAPLVAAARALGVHLETATPKALSTSL 177
            WFG+T++HSVAAMTY QAD L+      +P        G AG P+  +L+  L  DL +L    R   R R   GA+DLT+ GGELKF    D    L+V  KA +E++ TIAELMILANS VAQ++ + FP +A+LR H   S +R   L+A A   G+ L+T++  AL  SL
Sbjct:  643 WFGKTILHSVAAMTYGQADRLLDGLSADDPAIPNVVGVGTAGQPIAAALESALREDLVVLRAIGRTLYRGRALQGAVDLTQ-GGELKFSTTDD--GELRVGTKAALEIHSTIAELMILANSTVAQRLVETFPQSAMLRRHVPPSGNRFDALIALAATQGISLDTSSNMALQQSL 813          
BLAST of mRNA_S-ischiensis_contig9.20392.1 vs. uniprot
Match: A0A3R7EMY2_9STRA (DIS3-like exonuclease 1 (Fragment) n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7EMY2_9STRA)

HSP 1 Score: 124 bits (312), Expect = 2.500e-29
Identity = 79/186 (42.47%), Postives = 105/186 (56.45%), Query Frame = 0
Query:    5 FGRTVIHSVAAMTYDQADSLIHHGKVLEPPGFTRPPPGQAGAPVPTSLQPGLAHDLRLLTEFSRNCGRERVSSGAMDLTRDGGELKFKLDPD-------------TGAPLKVEAKAEVEVNHTIAELMILANSAVAQQIHKHFPSAALLRVHAAASEDRLAPLVAAARALGVHLETATPKALSTSL 177
            F ++++HS AAMTY QAD L+      +P        G AG P+  +LQP L  DL LL E  R   R+R +SGA+DL+  GGELKF   PD             +G  L V  KA +E++ TIAELMILANS VA+++   FP +A+LR H   S +R   LV  A + G+ L+T+T   L  SL
Sbjct:  224 FAKSILHSAAAMTYYQADRLMDGLAADDPAAVNSVGTGTAGQPIAAALQPALREDLLLLREIGRALYRKRAASGAVDLS-SGGELKFSKVPDDVLDADGDDGGRGSGGGLTVTTKAALEIHSTIAELMILANSTVAERLVAAFPQSAMLRRHVPPSGNRFDQLVGLASSQGLVLDTSTNMTLQRSL 408          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig9.20392.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LN43_ECTSI1.220e-5051.74DIS3-like exonuclease 1 n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JSW4_9PHAE1.130e-4750.50DIS3-like exonuclease 1 n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CJZ0_9STRA2.880e-4655.06DIS3-like exonuclease 1 n=1 Tax=Tribonema minus Ta... [more]
A0A7S2EK82_TRICV1.830e-3846.67DIS3-like exonuclease 1 (Fragment) n=1 Tax=Trieres... [more]
A0A7S4R116_9STRA9.630e-3445.11DIS3-like exonuclease 1 n=2 Tax=Ditylum brightwell... [more]
A0A7S4MYR8_9STRA2.150e-3246.41Hypothetical protein (Fragment) n=2 Tax=Odontella ... [more]
A0A1W0A8G9_9STRA7.410e-3244.44DIS3-like exonuclease 1 (Fragment) n=1 Tax=Thraust... [more]
A0A6G0XVG1_9STRA1.200e-3043.35DIS3-like exonuclease 1 n=2 Tax=Aphanomyces euteic... [more]
A0A485L742_9STRA2.240e-3044.83DIS3-like exonuclease 1 n=1 Tax=Aphanomyces stella... [more]
A0A3R7EMY2_9STRA2.500e-2942.47DIS3-like exonuclease 1 (Fragment) n=5 Tax=Aphanom... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001900Ribonuclease II/RPFAMPF00773RNBcoord: 3..181
e-value: 1.1E-24
score: 87.4
IPR031192DIS3-like exonuclease 1PANTHERPTHR23355:SF30DIS3-LIKE EXONUCLEASE 1coord: 3..181
NoneNo IPR availablePANTHERPTHR23355RIBONUCLEASEcoord: 3..181
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 3..181

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig9contigS-ischiensis_contig9:181073..185358 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig9.20392.1mRNA_S-ischiensis_contig9.20392.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig9 181073..185358 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig9.20392.1 ID=prot_S-ischiensis_contig9.20392.1|Name=mRNA_S-ischiensis_contig9.20392.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=211bp
PVVWFGRTVIHSVAAMTYDQADSLIHHGKVLEPPGFTRPPPGQAGAPVPT
SLQPGLAHDLRLLTEFSRNCGRERVSSGAMDLTRDGGELKFKLDPDTGAP
LKVEAKAEVEVNHTIAELMILANSAVAQQIHKHFPSAALLRVHAAASEDR
LAPLVAAARALGVHLETATPKALSTSLKRAETIVINRAGLGPGGKAGRAG
SGGDGRSGCRG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001900RNase_II/R
IPR031192DIS3L
IPR012340NA-bd_OB-fold