prot_S-ischiensis_contig9.20537.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig9.20537.1
Unique Nameprot_S-ischiensis_contig9.20537.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length646
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig9.20537.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 419..468
e-value: 6.6E-9
score: 35.8
coord: 560..607
e-value: 1.0E-8
score: 35.2
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 498..521
e-value: 1.2
score: 9.5
coord: 388..414
e-value: 0.096
score: 13.0
coord: 356..381
e-value: 1.5E-5
score: 24.9
coord: 529..554
e-value: 1.6E-4
score: 21.7
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 528..555
e-value: 8.2E-4
score: 17.4
coord: 459..491
e-value: 3.1E-4
score: 18.7
coord: 318..350
e-value: 2.7E-4
score: 18.9
coord: 423..456
e-value: 4.7E-7
score: 27.6
coord: 213..246
e-value: 3.6E-4
score: 18.5
coord: 178..211
e-value: 1.4E-4
score: 19.8
coord: 353..386
e-value: 3.3E-6
score: 24.9
coord: 248..281
e-value: 9.3E-5
score: 20.4
coord: 283..316
e-value: 7.9E-7
score: 26.9
coord: 565..596
e-value: 4.5E-7
score: 27.6
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 138..174
score: 9.229
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 561..595
score: 11.915
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 525..555
score: 8.221
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 490..524
score: 10.073
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 385..419
score: 9.164
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 596..630
score: 8.846
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 315..349
score: 11.071
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 420..454
score: 12.2
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 245..279
score: 10.26
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 210..244
score: 10.698
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 350..384
score: 12.047
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 280..314
score: 12.134
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 175..209
score: 11.268
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 455..489
score: 10.676
IPR033443Pentacotripeptide-repeat region of PRORPPFAMPF17177PPR_longcoord: 181..341
e-value: 6.9E-14
score: 51.7
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 555..645
e-value: 7.4E-22
score: 80.3
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 255..362
e-value: 2.3E-34
score: 120.3
coord: 104..254
e-value: 4.7E-32
score: 112.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 363..554
e-value: 2.2E-52
score: 180.3
NoneNo IPR availablePANTHERPTHR46128:SF10coord: 381..639
NoneNo IPR availablePANTHERPTHR46128FAMILY NOT NAMEDcoord: 142..398
coord: 288..536
NoneNo IPR availablePANTHERPTHR46128:SF10coord: 142..398
coord: 288..536
NoneNo IPR availablePANTHERPTHR46128FAMILY NOT NAMEDcoord: 381..639
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..33
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 29..33
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 34..645
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 17..28

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig9contigS-ischiensis_contig9:1191471..1193408 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig9.20537.1mRNA_S-ischiensis_contig9.20537.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig9 1191449..1194503 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig9.20537.1 ID=prot_S-ischiensis_contig9.20537.1|Name=mRNA_S-ischiensis_contig9.20537.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=646bp
MTCMGSRRAGSPPPVRIAHVVGGLLLPFNVVSGALLPPRRSRASGANSRI
GTMAWTLVMAGAGRGHRRFVKRHFPRDTRPGLRTGVPSRDWPLHARAGGD
IQGAQRRARQRIEAAGEHGDWEGALHELSQAAKFNLLNSFLYTATINVLG
KSNPPRWEKAIDLLREMPGRGVPSDVFAYTATISACARAGRSGEALELLV
QAQDNGVRPNVWTFAAAIDACAKAGQCDEALGLLRKIEEDGPRPNAHCFT
AAIDACANAGRCGEALGLLAHMEGSGIRPNVRSFAAAINACAKAGRSDEA
LELLARMEGSGVRPNIRSFTSAIDACAKDGRCDEALELLARMGGSGAPPN
RLSFAAAINACAKAGRADEALELLRRMEQKGPRPNVRVFTSAFDACANAG
RCGEALGLLARMEGSAVPPNVWSFAAAINACAKAGRSDEALELLRRMEQT
GLHPNVQAFTAAIDACANAGRCDEALGLLARMEGSGAPPNALSFAAAVKA
CAKAARSGEALRLLRYMQEKGPRPSNQVFTAAIDACAKAGRCDEALGLLK
AMEEGEGPRPNTQAFTAAIDACARAGRCDEALGLLARMERAGCPPNLQTF
TVAMYGCTHGGRCRDALELLTIMRVRSITPNLTSYNSAILACCAS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR033443PPR_long
IPR011990TPR-like_helical_dom_sf