mRNA_S-ischiensis_contig9.20772.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig9.20772.1 vs. uniprot
Match: A0A6H5KBT1_9PHAE (DDHD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBT1_9PHAE) HSP 1 Score: 149 bits (376), Expect = 8.620e-39 Identity = 73/111 (65.77%), Postives = 83/111 (74.77%), Query Frame = -1
Query: 115 GSLRYYRGSTVFPRLSFHVENLFSLGGPIGLFLMVRGQHRRLGRDFRLPGCDHLFNIFHPYDPVAFRLEPMV----GGVAAAAAAR----REPEMLPTWTGGLRVQYRVKR 423
G LRYYRGST FP LS VEN+F LG PIG+FLM+RGQHRRLG+ F+LPGC LFNIFHPYDPVAFRLEP++ G A R EP +LPTWTGGLRV Y+V+R
Sbjct: 821 GCLRYYRGSTKFPELSARVENVFCLGSPIGMFLMIRGQHRRLGKAFKLPGCRRLFNIFHPYDPVAFRLEPLLRTGNGDGRGANGGRGFPPEEPVILPTWTGGLRVHYQVQR 931
BLAST of mRNA_S-ischiensis_contig9.20772.1 vs. uniprot
Match: D8LDT5_ECTSI (DDHD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDT5_ECTSI) HSP 1 Score: 148 bits (374), Expect = 1.600e-38 Identity = 73/111 (65.77%), Postives = 83/111 (74.77%), Query Frame = -1
Query: 115 GSLRYYRGSTVFPRLSFHVENLFSLGGPIGLFLMVRGQHRRLGRDFRLPGCDHLFNIFHPYDPVAFRLEPMV----GGVAAAAAAR----REPEMLPTWTGGLRVQYRVKR 423
G LRYYRGST FP LS VEN+F LG PIG+FLM+RGQHRRLG+ F+LPGC LFNIFHPYDPVAFRLEP++ G V A EP +LPTWTGGLRV Y+V+R
Sbjct: 799 GCLRYYRGSTKFPELSARVENVFCLGSPIGMFLMIRGQHRRLGKAFKLPGCRRLFNIFHPYDPVAFRLEPLLRAGNGDVQGANDGGDPPPEEPVILPTWTGGLRVHYQVQR 909
BLAST of mRNA_S-ischiensis_contig9.20772.1 vs. uniprot
Match: A0A835YIJ9_9STRA (DDHD domain-containing protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIJ9_9STRA) HSP 1 Score: 144 bits (362), Expect = 6.640e-37 Identity = 68/105 (64.76%), Postives = 80/105 (76.19%), Query Frame = -1
Query: 115 GGGSLRYYRGSTVFPRLSFHVENLFSLGGPIGLFLMVRGQHRRLGRDFRLPGCDHLFNIFHPYDPVAFRLEPMVGGVAAAAAARREPEMLPTWTGGLRVQYRVKR 429
G SL YY GST FP L +ENLF LG PIG+FLMVRGQHR LG++F+L G LFN+FHP+DPVAFRLEP+V ++A REPE+LPTW GGLRV Y+VKR
Sbjct: 1000 GASSLAYYAGSTQFPPLRCPIENLFCLGSPIGMFLMVRGQHRALGKNFKLSGAKRLFNVFHPFDPVAFRLEPLV------SSANREPEILPTWQGGLRVHYQVKR 1098
BLAST of mRNA_S-ischiensis_contig9.20772.1 vs. uniprot
Match: A0A7S0G6Y8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0G6Y8_9STRA) HSP 1 Score: 108 bits (269), Expect = 1.770e-27 Identity = 46/91 (50.55%), Postives = 62/91 (68.13%), Query Frame = -1
Query: 118 FPRLSFHVENLFSLGGPIGLFLMVRGQHRRLGRDFRLPGCDHLFNIFHPYDPVAFRLEPMVGGVAAAAAARREPEMLPTWTGGLRVQYRVK 390
+P+L F V N F +G P+ +FLM+R QH+ + ++ LPGC LFNIFHPYDP A+R+EP++ AA EPE++ W GG RVQYR K
Sbjct: 36 YPQLEFQVSNFFMIGSPLAVFLMIRNQHQPMDLNYSLPGCKRLFNIFHPYDPAAYRIEPLLDRKNAAL----EPEIITNWNGGFRVQYRTK 122
BLAST of mRNA_S-ischiensis_contig9.20772.1 vs. uniprot
Match: A0A7S2PMJ7_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PMJ7_9STRA) HSP 1 Score: 104 bits (259), Expect = 2.510e-23 Identity = 49/129 (37.98%), Postives = 70/129 (54.26%), Query Frame = -1
Query: 79 FPRLSFHVENLFSLGGPIGLFLMVRGQHRRLGRDFRLPGCDHLFNIFHPYDPVAFRLEPMVGGVAAAAAARREPEMLPTWTGGLRVQYRVK-------------------------RSAGLIDDLDQDD 390
+P+L F V N F +G P+ +FL++R QHR + ++ LP C +FNIFHPYDPVA+R+EP++ + EPE++P W GG R+QY+ K R GL D D+DD
Sbjct: 240 YPQLMFDVANTFMIGAPVPVFLLIRNQHRPMNPEYSLPVCSRVFNIFHPYDPVAYRIEPLIN----PRNRKVEPELIPDWRGGYRMQYQTKLFWKNLVNETYQRQQYLIDALEAGIRQIGLADPADEDD 364
BLAST of mRNA_S-ischiensis_contig9.20772.1 vs. uniprot
Match: A0A7S1BIF4_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BIF4_9STRA) HSP 1 Score: 102 bits (255), Expect = 1.040e-22 Identity = 46/94 (48.94%), Postives = 63/94 (67.02%), Query Frame = -1
Query: 118 STVFPRLSFHVENLFSLGGPIGLFLMVRGQHRRLGRDFRLPGCDHLFNIFHPYDPVAFRLEPMVGGVAAAAAARREPEMLPTWTGGLRVQYRVK 399
S +P+L+F V+N F +G PI +FLM+R HR L +RLPGC ++N++HPYDP A+R+EP+V A RE +LP W GG R+QYR K
Sbjct: 280 SDAYPQLTFPVQNTFMIGSPIAVFLMIRNCHR-LHATYRLPGCSRVYNVYHPYDPAAYRIEPLVD----RRNAGREARILPKWDGGFRLQYRTK 368
BLAST of mRNA_S-ischiensis_contig9.20772.1 vs. uniprot
Match: A0A7S1XZ68_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XZ68_9STRA) HSP 1 Score: 96.3 bits (238), Expect = 2.660e-22 Identity = 46/93 (49.46%), Postives = 59/93 (63.44%), Query Frame = -1
Query: 115 FPRLSFHVENLFSLGGPIGLFLMVRGQHRRLGRDFRLPGCDHLFNIFHPYDPVAFRLEPMV-GGVAAAAAARREPEMLPTWTGGLRVQYRVKR 390
+P L F LF LG PIG F+M+R R + LPG L N+FHPYDPVAFRLEP+V GG P+++PTW GGLR+QY+V++
Sbjct: 12 YPSLDFTPGRLFCLGSPIGAFVMLRRLSEAFNRSYCLPGGVKLCNVFHPYDPVAFRLEPIVVGGAYVCRNPLPPPQLVPTWQGGLRMQYKVRQ 104
BLAST of mRNA_S-ischiensis_contig9.20772.1 vs. uniprot
Match: A0A7S4NGM7_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NGM7_9STRA) HSP 1 Score: 101 bits (251), Expect = 5.670e-22 Identity = 42/96 (43.75%), Postives = 64/96 (66.67%), Query Frame = -1
Query: 118 RGSTVFPRLSFHVENLFSLGGPIGLFLMVRGQHRRLGRDFRLPGCDHLFNIFHPYDPVAFRLEPMVGGVAAAAAARREPEMLPTWTGGLRVQYRVK 405
R +P+L F V++ F +G P+ +FLM+R +H L DF LPGC ++NIFHPYDP A+R+EP++ + A + +++P W GGLRV+Y+ K
Sbjct: 973 RSGLRYPQLKFRVQHFFMVGSPVAVFLMLRNEHEPLREDFSLPGCARVYNIFHPYDPAAYRIEPLI----SVRNASVDSKIIPHWKGGLRVKYQTK 1064
BLAST of mRNA_S-ischiensis_contig9.20772.1 vs. uniprot
Match: A0A7S2UD84_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UD84_9STRA) HSP 1 Score: 100 bits (249), Expect = 6.450e-22 Identity = 44/95 (46.32%), Postives = 63/95 (66.32%), Query Frame = -1
Query: 115 STVFPRLSFHVENLFSLGGPIGLFLMVRGQHRRLGRDFRLPGCDHLFNIFHPYDPVAFRLEPMVGGVAAAAAARREPEMLPTWTGGLRVQYRVKR 399
S +P+L+F+V N F LG P+ +FLM+R + L D+ LPGC +FNIFHPYDP A+R+EP++ A A A+ ++ W GG RV+Y+ KR
Sbjct: 243 SPTYPQLNFNVSNTFMLGSPVAVFLMIRNPEQPLSVDYHLPGCRRVFNIFHPYDPAAYRIEPLIHKKNANAEAK----IIKHWRGGFRVKYQTKR 333
BLAST of mRNA_S-ischiensis_contig9.20772.1 vs. uniprot
Match: A0A0P1AGL2_PLAHL (Phospholipase ddhd2 isoform 1 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AGL2_PLAHL) HSP 1 Score: 100 bits (249), Expect = 1.050e-21 Identity = 49/94 (52.13%), Postives = 67/94 (71.28%), Query Frame = -1
Query: 112 VFPRLSFHVENLFSLGGPIGLFLMVRGQHRRLGRDFRLPGCDHLFNIFHPYDPVAFRLEPMVGGVAAAAAARREPEMLPTWTGGLRVQYRVKRS 393
V P+L+F VENLF G PIGLFL VRGQ ++G DFRLP C LFNI+HPYDPVA+R+EP++ + A + A ++ T+ G LR QY+++ +
Sbjct: 895 VVPKLAFDVENLFCFGSPIGLFLNVRGQ--KIGCDFRLPRCRRLFNIYHPYDPVAYRIEPIINPLRAHSKAA----IIRTFEGKLRFQYQLRNT 982 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig9.20772.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig9.20772.1 >prot_S-ischiensis_contig9.20772.1 ID=prot_S-ischiensis_contig9.20772.1|Name=mRNA_S-ischiensis_contig9.20772.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=153bp PSGVCRAPAARDRVRGRAAPEWAARRVVLVQVIDEPSRALHAVLHPQAARback to top mRNA from alignment at S-ischiensis_contig9:3117094..3122470- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig9.20772.1 ID=mRNA_S-ischiensis_contig9.20772.1|Name=mRNA_S-ischiensis_contig9.20772.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=5377bp|location=Sequence derived from alignment at S-ischiensis_contig9:3117094..3122470- (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig9:3117094..3122470- >mRNA_S-ischiensis_contig9.20772.1 ID=mRNA_S-ischiensis_contig9.20772.1|Name=mRNA_S-ischiensis_contig9.20772.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=918bp|location=Sequence derived from alignment at S-ischiensis_contig9:3117094..3122470- (Schizocladia ischiensis KU_0333)back to top |