prot_S-ischiensis_contig9.20714.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig9.20714.1
Unique Nameprot_S-ischiensis_contig9.20714.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length125
Homology
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BLAST of mRNA_S-ischiensis_contig9.20714.1 vs. uniprot
Match: A0A835YTW3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTW3_9STRA)

HSP 1 Score: 130 bits (326), Expect = 1.620e-32
Identity = 58/114 (50.88%), Postives = 82/114 (71.93%), Query Frame = 0 
Query:    4 DAITKMFVAGVGGKPVVICVDNVHLMDTYSWRLLVELAKAEGTPCLFVLTSQAMDERRWNFALSNGMCMANDKPVRRKARHYFQLLGTPGVARKFELQGFTRQEIRQSLLALGV 117
            +A+ ++F + V G P V+C+DNVH M+ +SWR+++ LA+    PCLFVLTSQ MDERRW+FA  N   +  DKPVRR A+HYF+LL  PG   +FEL+  T  E+ ++L+A+GV
Sbjct: 1161 EALARIFESAVAGAPAVVCLDNVHFMNGHSWRVILRLAQCRRCPCLFVLTSQPMDERRWSFA-HNSPYITYDKPVRRNAQHYFRLLQIPGACARFELRNLTHAEVAEALMAMGV 1273
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig9.20714.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835YTW3_9STRA1.620e-3250.88Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig9contigS-ischiensis_contig9:2764176..2765560 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig9.20714.1mRNA_S-ischiensis_contig9.20714.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig9 2764176..2765567 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig9.20714.1 ID=prot_S-ischiensis_contig9.20714.1|Name=mRNA_S-ischiensis_contig9.20714.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=125bp
MLHDAITKMFVAGVGGKPVVICVDNVHLMDTYSWRLLVELAKAEGTPCLF
VLTSQAMDERRWNFALSNGMCMANDKPVRRKARHYFQLLGTPGVARKFEL
QGFTRQEIRQSLLALGVAGDERRNS
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