prot_S-ischiensis_contig9.20381.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig9.20381.1
Unique Nameprot_S-ischiensis_contig9.20381.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length276
Homology
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BLAST of mRNA_S-ischiensis_contig9.20381.1 vs. uniprot
Match: A0A6H5KZ72_9PHAE (DOT1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ72_9PHAE)

HSP 1 Score: 103 bits (256), Expect = 2.160e-21
Identity = 48/106 (45.28%), Postives = 74/106 (69.81%), Query Frame = 0 
Query:   58 LSKYEVFAYMKKLHKHLGEDIVASDDMKKEREDALEVMGRVYVDMSAAGVRAISQENRIRDRLGHDSLVYGEIDNESLLKVLQKLRRVHGHMIQAGGSFWDLGAGV 163
            LSKYEVF++M+++H   G  I+ +++  ++  +A +++  +Y  +    V+ ISQ+NRI   L  DS+ YGEID    LKV+ KL+R+HG+M+ AGGSFWDLG+GV
Sbjct:  195 LSKYEVFSFMRRVHDRAGAAIIETEEAVEDMREAKKMVDMLYEHLPVQTVKEISQQNRINANLMQDSVAYGEIDISHFLKVMVKLKRIHGNMMSAGGSFWDLGSGV 300
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BLAST of mRNA_S-ischiensis_contig9.20381.1 vs. uniprot
Match: D8LQJ9_ECTSI (DOT1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQJ9_ECTSI)

HSP 1 Score: 98.6 bits (244), Expect = 9.100e-20
Identity = 45/106 (42.45%), Postives = 73/106 (68.87%), Query Frame = 0 
Query:   58 LSKYEVFAYMKKLHKHLGEDIVASDDMKKEREDALEVMGRVYVDMSAAGVRAISQENRIRDRLGHDSLVYGEIDNESLLKVLQKLRRVHGHMIQAGGSFWDLGAGV 163
            LSKYEVF++M+++H   G  ++++++  ++   A +++  +Y  +    ++ ISQ+NRI   L  DS+ YGEID    LKV+ KL+R+HG+M+  GGSFWDLG+GV
Sbjct:  219 LSKYEVFSFMRRVHDRAGAAMISTEEAVEDMRKAKKMVDTLYEHLPVQTLKEISQQNRINASLMQDSVAYGEIDISHFLKVMVKLKRIHGNMMSVGGSFWDLGSGV 324
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig9.20381.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KZ72_9PHAE2.160e-2145.28DOT1 domain-containing protein n=1 Tax=Ectocarpus ... [more]
D8LQJ9_ECTSI9.100e-2042.45DOT1 domain-containing protein n=1 Tax=Ectocarpus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig9contigS-ischiensis_contig9:27031..28173 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig9.20381.1mRNA_S-ischiensis_contig9.20381.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig9 27031..28173 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig9.20381.1 ID=prot_S-ischiensis_contig9.20381.1|Name=mRNA_S-ischiensis_contig9.20381.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=276bp
EDLPIDKAIDKKRKGAKSKVQGESDTEPETDDSDEDSQASEAEAEEEEAP
GQEPFVPLSKYEVFAYMKKLHKHLGEDIVASDDMKKEREDALEVMGRVYV
DMSAAGVRAISQENRIRDRLGHDSLVYGEIDNESLLKVLQKLRRVHGHMI
QAGGSFWDLGAGVVSVGRQRLPPDLLSTLCSYEMRDYVVYSTHTGSTELE
VCTSKYCSAWTALVLYLALFPLQNWTCTLNPTIIRTPVVKGITSLARPTR
CRQPMHEIVHYSSTALTVVVSQCMC*
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