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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 611 |
| Cds size | 609 |
| Stop | 0 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815581.1376543-CDS-S-ischiensis_contig11:3428623..3428866 | 1622815581.1376543-CDS-S-ischiensis_contig11:3428623..3428866 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig11 3428624..3428866 - |
| 1695739783.5854385-CDS-S-ischiensis_contig11:3428623..3428866 | 1695739783.5854385-CDS-S-ischiensis_contig11:3428623..3428866 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig11 3428624..3428866 - |
| 1622815581.148206-CDS-S-ischiensis_contig11:3433165..3433531 | 1622815581.148206-CDS-S-ischiensis_contig11:3433165..3433531 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig11 3433166..3433531 - |
| 1695739783.597239-CDS-S-ischiensis_contig11:3433165..3433531 | 1695739783.597239-CDS-S-ischiensis_contig11:3433165..3433531 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig11 3433166..3433531 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig11.2369.1 >prot_S-ischiensis_contig11.2369.1 ID=prot_S-ischiensis_contig11.2369.1|Name=mRNA_S-ischiensis_contig11.2369.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=203bp
PLHLSVSRGAHARMRARTHACTHARMDDGRTDGRVGTHSRMCIGAHGRGA
VGTTTNACSWHVRDRYDVGASGAGAGGGGGGGGGGDGGGLNGSSSGRKEQ
IRSRTRDKDKAEQEQDKGAKIKVRPLLTARPESRAGTKRSRSSGGGSGRY
GAGGGGGGASSNSAASSMSHGVVSPHALAAVVARMGTSGADTGAGPGAEM
GAG back to topmRNA from alignment at S-ischiensis_contig11:3428624..3433531- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-ischiensis_contig11.2369.1 ID=mRNA_S-ischiensis_contig11.2369.1|Name=mRNA_S-ischiensis_contig11.2369.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=4908bp|location=Sequence derived from alignment at S-ischiensis_contig11:3428624..3433531- (Schizocladia ischiensis KU_0333)
CCTCTCCACCTGTCGGTCTCTCGCGGGGCACACGCACGCATGCGTGCGCG
CACGCACGCATGCACACACGCCCGGATGGACGACGGACGGACGGACGGAC
GCGTGGGTACACACTCACGCATGTGCATCGGGGCGCATGGGCGCGGCGCG
GTTGGGACCACAACAAACGCTTGCTCTTGGCATGTCAGGGACAGGTATGA
CGTGGGCGCGAGCGGCGCCGGCGCCGGCGGCGGAGGCGGAGGCGGCGGCG
GCGGCGACGGGGGTGGCCTGAATGGGTCCAGCTCGGGGAGGAAGGAGCAG
ATCCGGTCCCGGACCCGGGACAAGGACAAGGCGGAGCAGGAGCAGGACAA
GGGGGCCAAGATCAAGGTGGGTTTATAGGGGAGGGGAAGGCCGCCGGTTA
GGCGGAGTGGAACTCCTTTCATAGACGGGTCACCTGTGCAGGCGTGTGTA
TTTCCGGGCGAGGGGCCCTTTCGGCCAAAATGTCCGTGCGTGGCAACGCT
TTATGGCCACATTGGCGCCAATTGCTCGCGCTGTTGTGCACGGTTCGCGA
CGCGCCCGGTGTCAACACAACGATAAAAAATGGTGGCACCTGACACAAGT
TCAAACACCGTTGGAAGATCACTGTGGCGCGAGGTATCCCTCTTGCAAAA
TCAGTATGCGCCTCCAGAATTGTGCGCGAGGGCCGCGAGCAAGCACCGCA
GTATAGCCGGCAACAGTGCAATCACAGCCTACTGCGGCAAGGGAGATCCC
CTCCCCTACACGCCATCTACGTATATATATACTCGAGTACTACGTAGTAT
GTACTCGCATTGTGCTTGCCGCAGTCCCGAGACCATTGACCGCGCGCCTC
GGTCGAGACGGAGCAGGACCCCTCCCTCCCCTGAGTTTACGGTTGTAGAC
CCGAAGTTTCGACCTAGGGCTGTCGACAATGCACGCGAGGTTATGTCGCA
AGACGAGCCAATGAGTATGAGTACATATAGGGTACTGTACCCACTGTAGT
AGTTGGGGAGACTTGAGTTTCGAGACCCCAATTAGTTAGCGGATTGAGTT
TCAGGATACCCAAGTAGTTGAAGAGGTTTGTGTCGCAATACGAGCCAATG
AGTAGGTGGGCGGTGACACCTGCGGACGGATTTGCGAACCGGCGGGCGGG
ATGAGTGCTGTCGTCAACCGGCTGCGGGTGCGACCGGTTATTCCTGTCGT
CGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTCGGTTGCGCTCACGGA
GCTGCTGTTTTGCTTTTGTTTTTGGATATTTTCCGGGGGCGCTTGCTCCG
TTCTATTCTGTGTTCACTGAAGGCATTTTGGGACTTACCGGTACGGTTGG
GGCGCGAACGGCTAAAAAAAAAACGGGGGTCAAAGTATGCGCGAAATCAA
AGCGGGGGGAAAAGCAGGAAACCGGCCGGCCAGCCGTCCGGGTGTCAGTG
ATGGCCAATCAACCGGCACCCACCAGTTGCCGTCAATCTCACACACGTGC
GATTGCACCTCGTTGCAAATTATTGAATCACCACCAGTTGCCGCCGGCGC
TGGTTCACAGCTGTACCGTTGCACATCGGAGATGTTTCATGAATGATACC
CCTACCATTCCTGGACCATGCTACCCTGCACCCTGATCGGTGGTCCAGCA
CGGAGTGTAGTGGGTCGACGGTACAGTACAGTAAGTGGCATGCACAGGAC
AGGGGTAAACCTGCCCGACTTGAGTATATATATATATATATATGTACTCA
CGTGGTGCTTGCCATAGTCCCGAGACCATAAGTATGTACTCGTATATATT
TCTGGGCCATGACTTGCTGATCCCGGCCCGGAATCCTTACGGTATCTACA
GCAGAGCAGTTTCATGTGGCTTCCAGCTGTATAGGAGAGTACTAGGGCTA
AGGTGAGACTCCGCAGAGATGCGACCTGGCAGGGCTCACCAGTGAAACTG
GAAGCCGGTTTCAACCCGGTTCGGTTAGCCAATACACCTTTTTCCCGGCT
AATTTGCTCGACAAGGGGTTTTCCTTTCGCAGAAACTGGCAATAAAGGTA
TTGCCGCCCTGCACAACGGCTCTCTGACACGGCCAAGTATGCACGATTTT
AGAGCAGAAAGCTATCGACCCCGGGCTGCCGGGCCCCGGCCCCAGGCCCG
CTGAGACCCGCCACCCCCTTGCACATCGGCCGTGGGGAGAACCCATCCCA
TTTTGCCTAAGTTAAACGCTTCAAAATTGCTCCGTCGTCAACGGCGTGTG
ATCAATAGTCTTGGGATTACGGCGAGCACAACGTGAGTACATATATACTT
AGAAGTATATATATTCTGGTATACTACTGTACGTAGTATGTATTCAAAGT
ACTTGGGTTGATCGATGAGAAGCATCCAACAATCGGCTTATCGATCGATA
GCGCGGCCGAGCCCCACCGATATTCCGTCGCTGACTGGCTCGGCCCTCAT
GCTTGGCGGGATGCGGGGAGGTGCTGTTTTGACCCCCCCGGCGGGAGGTC
TGGTTCCGGAAGAAGTTTTGTTTCCGGGTCGTTGGCCGGGGGCCTGGGCA
ATGTGGGTCCAGTAGGTGCAGTGCGATATGTACTGCAGTCAGTGCTTGCC
ACGTTCTCGAGTACAGTGCGCTGTGCAGCGCGGTGGTCCACTGTGTACGG
CACAGTGCTGTAGTCTTGGAAACTGCTTTCAGGCCATAGAGGCTTCTCTT
AAGCCAACTGGATGGTAGCCATCTTTGGCACTGTGTTCGAATCCCTGAGG
TTGTTTGACATAAGTTGTCACATGCCTGAGGACACTCTGTAGGAAGGCTG
TTATGATATCAACTAGCCACGTACTCTGTAGGCAGGCTGTTTTGATATCA
ACTTGCAACAGTTGCTGCTGTGCCGCGCAGCTGATGGAGCAAGTCTAGGG
TGTGCCGCGTGCAGGCACTGCGCTGCACTGCACTGTACACTGCACTGTGG
CAGGTGCTGGTACTCAGTATACCCGTACGGTGTTCACGTGGTGCTGTACA
GCACAGTATACATGTACTCACGTGGTGCTTGCCGTAGTCCCGAGACCATT
GGCCACGCGCCTCGGTTGAGACGGAGCAGGTACAAACTGTTCGAGCAGAG
TACTTGGACATACTTTGGAGTATTTGCTGTGCCCGGAGGCGGCCGCACAG
CAGCAGCGCCGGTTCCCAGTGTTTTGGAAGCGCACAGTACTCACTGCCAA
AACCGAAGGCGTTCGAGCAGGTTCACTTGGGGCGGAAGTGCTCGCATGGT
TGGAGCACGGGGGGGCGCGTGTACTTGTTGAAGAAAAAGCGGGGAGATCG
CGAGTACTCCAGGGCGCACGCAAGGGGGGCCTCTAGCCGAGTTCTACTGC
ACACACATGCGAGTACCTAGGGAGCAAGTGCTTCCAAGTATCTACGAAGT
ACAAGTACTTTGAATTACGGTGTAGCGTTGAGCATCGGAGGCGTGCGTGC
TTCCCCTGGAGGTGTAGTCGGAAAGGGACACGAACCAGCTGCGCGGGTGT
GCCCTCGCGGAGGCTGCGCCCCCGAACGGCACAATTCTCCCACCATCTTT
GGCCGTGCTGCACCTGGGCACTCTGACTGCTGTGCGACAGAAGTACTTCG
GGAAGCACGAGTACACATATGTGGTGCTACTGTACGAGTAGTAAGTACTC
GAGTATGTACTGCAAGCACCACGTGAGTACATATATATATATACTACTAT
ATATATACCCTGTGTCCTTGGTGACGCGGTCTGCACCTCGGCCCGTGCCG
TTCCTGTTGGCAATGCTACTTATGTGTATTTCTTGATCGAGGCGCATGGT
CGATAGTGGTCCTGGGACTACAGCAAGCACAACGTGAGCAAATATACTTG
TATACTTCGAAGTATACAGTACATGGTACGGCATTTCCCTCGCTGTGCTT
CCAAGCACTTTGAAGTACTACCTGAGTGAGCAGTTCCAAGTGTGTACTGG
AAGCCTGCTTCCGCCTCAGCTACATACTTGGGAGTACATGTGATGTCACA
AGTCCGTATGGTTGAGGGTGAGCGAGGTTTCCTGTAATGACACTGATGTT
GTGGGGGGTGGGAGCGCGACGCTGCCGTCCTCAACTGGTCTGTAGCGTAG
CGTGGTGCAGCGGCAGGCCTCCTTTTTGCTCTCTCTCTCTCTGGTACAAC
CAGCTGCTCTACACTTGTACTGTACCACTACAGTACATCCTGTGCGAGGG
GAAGAAGGGCTTCGTTGAGTCCCGTTTCGGGATGTGCCTTTTGGCATGGG
GCCTGGAACTCGCCGCTTATCTACCACTCAAAATACTGTACATGGTACTT
ACCTAGCACTGCTATCCCTGCTGTACTGACTTGCATAGAGTTGAGCAAGT
CCTCCACAGACTTTGGGCTTGCCCCCGTGATAAGTAGATTGTCCACATAG
ATGGACACCAACAAATCAACCGTCTCAGGCGTTTCCCCCTCTTGATGTAC
ACGCAGGGGTCGATTTCACTGGGAATCAAGCCTTGCTCGAGGGTACAGTA
CACCGGTTTGCTTCCAAGGCGAGTAGTACTAGTAGCGCACAACCCTCGCT
CGCTCGCCCCAGCGACTAATAGTACATACACTTGTCTCTCATCTGTGAAC
AACCCTCATCCTTTGCCCCCCCCCCACCCCCCCCGGGCAACAAAAACGGC
GCCCCTTCTCGCCAGGTGCGGCCTCTGCTAACCGCACGGCCTGAAAGCCG
CGCAGGGACCAAGCGCTCGAGGAGCAGCGGCGGTGGCAGCGGCCGCTACG
GCGCCGGCGGTGGAGGCGGAGGCGCAAGCTCCAACAGCGCCGCCTCAAGT
ATGAGCCATGGGGTCGTGTCCCCCCATGCCCTGGCTGCCGTCGTGGCGCG
GATGGGCACCTCGGGTGCGGACACGGGCGCTGGGCCAGGGGCAGAAATGG
GAGCGGGG back to topCoding sequence (CDS) from alignment at S-ischiensis_contig11:3428624..3433531- >mRNA_S-ischiensis_contig11.2369.1 ID=mRNA_S-ischiensis_contig11.2369.1|Name=mRNA_S-ischiensis_contig11.2369.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1218bp|location=Sequence derived from alignment at S-ischiensis_contig11:3428624..3433531- (Schizocladia ischiensis KU_0333)
CCTCTCCACCTGTCGGTCTCTCGCGGGGCACACGCACGCATGCGTGCGCG
CACGCACGCATGCACACACGCCCGGATGGACGACGGACGGACGGACGGAC
GCGTGGGTACACACTCACGCATGTGCATCGGGGCGCATGGGCGCGGCGCG
GTTGGGACCACAACAAACGCTTGCTCTTGGCATGTCAGGGACAGGTATGA
CGTGGGCGCGAGCGGCGCCGGCGCCGGCGGCGGAGGCGGAGGCGGCGGCG
GCGGCGACGGGGGTGGCCTGAATGGGTCCAGCTCGGGGAGGAAGGAGCAG
ATCCGGTCCCGGACCCGGGACAAGGACAAGGCGGAGCAGGAGCAGGACAA
GGGGGCCAAGATCAAGCCTCTCCACCTGTCGGTCTCTCGCGGGGCACACG
CACGCATGCGTGCGCGCACGCACGCATGCACACACGCCCGGATGGACGAC
GGACGGACGGACGGACGCGTGGGTACACACTCACGCATGTGCATCGGGGC
GCATGGGCGCGGCGCGGTTGGGACCACAACAAACGCTTGCTCTTGGCATG
TCAGGGACAGGTATGACGTGGGCGCGAGCGGCGCCGGCGCCGGCGGCGGA
GGCGGAGGCGGCGGCGGCGGCGACGGGGGTGGCCTGAATGGGTCCAGCTC
GGGGAGGAAGGAGCAGATCCGGTCCCGGACCCGGGACAAGGACAAGGCGG
AGCAGGAGCAGGACAAGGGGGCCAAGATCAAGGTGCGGCCTCTGCTAACC
GCACGGCCTGAAAGCCGCGCAGGGACCAAGCGCTCGAGGAGCAGCGGCGG
TGGCAGCGGCCGCTACGGCGCCGGCGGTGGAGGCGGAGGCGCAAGCTCCA
ACAGCGCCGCCTCAAGTATGAGCCATGGGGTCGTGTCCCCCCATGCCCTG
GCTGCCGTCGTGGCGCGGATGGGCACCTCGGGTGCGGACACGGGCGCTGG
GCCAGGGGCAGAAATGGGAGCGGGGGTGCGGCCTCTGCTAACCGCACGGC
CTGAAAGCCGCGCAGGGACCAAGCGCTCGAGGAGCAGCGGCGGTGGCAGC
GGCCGCTACGGCGCCGGCGGTGGAGGCGGAGGCGCAAGCTCCAACAGCGC
CGCCTCAAGTATGAGCCATGGGGTCGTGTCCCCCCATGCCCTGGCTGCCG
TCGTGGCGCGGATGGGCACCTCGGGTGCGGACACGGGCGCTGGGCCAGGG
GCAGAAATGGGAGCGGGG back to top
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