mRNA_S-ischiensis_contig87.20237.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig87.20237.1 vs. uniprot
Match: Q54UX5_DICDI (Uncharacterized protein n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=Q54UX5_DICDI) HSP 1 Score: 63.2 bits (152), Expect = 2.890e-6 Identity = 73/379 (19.26%), Postives = 160/379 (42.22%), Query Frame = 2
Query: 587 TLIKSSRDALRAMGVAAKGSARFLCLPGEVTGNLSEVDSSSDRSFKMLYRRSIVLRSESVDEASEANPAALGMEASELLEKVGG-YYVSKVFYGALLEIDFVFEAQSVYEKDEWTVIACAELDMGFFKVGKTWKFGESSESLESLLDLRASVRCVGNKEVSGMECNTVEDAENIIKKFQNTVGEGDAAVVGFQVRALPVAVFPQLGTLARMQVERAEANLEEANAFLATYSDALRRCKTAIRKFSRPGAAGGPPERSRKLLLAAAQRIKEELGLAGFVREYLDVDFLRIARESIMEFGGKNSDSYLASLDGLSLEAAGLAGLASLDLGLGSYAGYAVAGVPEWKGMVAGRLSMEVVAYEGGFQDGRFHGEGRMSYKNGN 1720
TLI A+ V+ + S + + G++ G + SS+ L+ R V + + ++ + + L+ + G +Y+SK+ YGA+L++ E+ +E +D+ + K + S +S +++ +SV G K++ + T+++A +I F+ V E V ++ +P + P L T+ +Q + L + Y + + ++ +P + + + + ++ E + L ++ L + F++ + +I+ +D+ S ++ + + G + G + G V G+P +KG ++ YEG G+ HG G+M+Y +GN
Sbjct: 60 TLINDQESLTSALNVSGELSLSYGLMSGKIMGEYLDTSSSNSNKLTFLFTRRKVTKIVELKSTAKTTKELQAINNIDSLKSIYGLFYISKIEYGAILDLKITIESSDSKTMNELKGELEGNVDINKLSIKVKGKMDKEDGSSKSKINVTSSVSMSGCKDLKKVHIQTLDEANQLIGAFE--VDEEALVPVRMEISQIPANLTPSL-TIDPIQFNHYKKKLSDVGKTYLEYQQMILQLDV-FKQLIQPMLED---DDNAEYIEDLHPKVVEFISLLKSSQDKL-IGFMQGSMNNILTNEIPVTDADAESKKSIAKQ---MIGSSFTKTDSGRWKGPTVGGIPTYKGTYK---YIDGSEYEGLCLKGKRHGNGKMTYYDGN 424
BLAST of mRNA_S-ischiensis_contig87.20237.1 vs. uniprot
Match: Q54V69_DICDI (Uncharacterized protein n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=Q54V69_DICDI) HSP 1 Score: 63.5 bits (153), Expect = 3.520e-6 Identity = 79/382 (20.68%), Postives = 155/382 (40.58%), Query Frame = 2
Query: 587 TLIKSSRDALRAMGVAAKGSARFLCLPGEVTGNLSEVDSSSDRSFKMLYRRSIVLRSESVDEASEANPAALGMEASELLEKVGG-YYVSKVFYGALLEIDFVFEAQSVYEKDEWTVIACAELDMGFFKVGKTWKFGESSESLESLLDLRASVRCVGNKEVSGMECNTVEDAENIIKKFQNTVGEGDAAVVGFQVRALPVAVFPQLGTLARMQVERAEANLEEANAFLATYSDALRRCKTAIRKFSRPGAAGGPPERSRKLLLAAAQRIKEELGLAGFVREYLD--VDFLRIARESIMEFGGKNSDSYLASLDGLSLEAAGLAGLASLDLGLGSYAGYAVAGVPEWKGMVAGRLSMEVVAYEGGFQDGRFHGEGRMSYKNGNL 1723
TLI+ S A+ V + S + + G+V GN + ++SS+ LY R IV + +D ++ + ++ + L+ G +Y+SK+ YGA+L++ E+ ++ + +G + + S S L + +SV G K + + +DA +I F+ V + V ++ +P L ++ + + ++ + +F + P A K L + + L ++ L+ + FL+ E I+ SDS ++ + L A + G + G +AG + +P +KG + + Y+G DG+ HGEG ++Y GN+
Sbjct: 57 TLIRDSESLKSALDVGGEISLSYGLISGKVMGNYIDTNTSSNERMTFLYTRRIVDKIVELDYHAKPSQDISKVDNIDSLKSTYGLFYISKIEYGAILDLRITLESSDKGTMNKIKGELSGSISIGALSLSVKAHIDKEESSSSSKLKVTSSVLMGGCKPIDKTDVKNFDDAMKVIDSFK--VDQDRLIPVRMEISPIPTRATLLL-SIDPLSLNHYKSKVSSIGSFYWDLQQMIIILDAFKNNILSPLLADDEKAIYIKTLYSNISNLNSSL------KDKLESLIKFLQKRIEYILVSEPPFSDSDISEIR---LNAQQMIGTTQTETDKGRWAGPTINKIPTYKGTY--KYKYDDSKYDGLCLDGKRHGEGILTYAEGNI 424
BLAST of mRNA_S-ischiensis_contig87.20237.1 vs. uniprot
Match: Q54UD6_DICDI (Lectin_legB domain-containing protein n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=Q54UD6_DICDI) HSP 1 Score: 62.8 bits (151), Expect = 6.100e-6 Identity = 93/448 (20.76%), Postives = 177/448 (39.51%), Query Frame = 2
Query: 413 VELYLPVTISAEGVPLDAPRPGDGFALSGSRTAPLQRAFGDAPGSTHQESQVSMESSFTLIKSSRDALRAMGVAAKGSARFLCLPGEVTGNLSEVDSSSDRSFKMLYRRSIVLRSESVDEASEANPAALGMEASELLEKVGG-YYVSKVFYGALLEIDFVFEAQSVYEKDEWTVIACAELDMGFFKVGKTWKFGESSESLESLLDLRASVRCVGNKEVSGMECNTVEDAENIIKKFQNTVGEGDAAVVGFQVRALPVAVFPQLGTLARMQVERAEANLEEANAFLATYSDALRRCKTAIRKFSRPGAAGGPPERSRKLLLAAAQRIKEELGLAGFVREYLDVDFLRIARESIMEFGGKNSDSYL--------ASLDGLSLEAAGLAGLASLDLGLGSYAGYAVAG--VPEWKGMVAGRLSMEVVAYEGGFQDGRFHGEGRMSYKNGNL 1723
+ L LP+ + + G GF + A + F + ++ +LI+ + A+ V + S + + G+V GN + ++SS+ LY R IV + +D SE + + L G YY+SK+ YGA+L++ E+ + + + +G + + S S L + +SV G+ + + ++A ++I KF+ V V +V +P V P L ++ + + E L+ +F + + + A +K P G E A IKE + + + L + ++SI++F + L AS+ + A + G + G + G V +P +KG + + YEG +G+ HG+G + Y++GN+
Sbjct: 1 MSLVLPIPAGVNTLLITENDLGRGFNIENGENAKKGQVFICEKEKIKSTFPSTDSNNLSLIRDNESLKAALDVGGELSLSYGLISGKVMGNYIDTNTSSNERMTFLYTRRIVHKIVELDYKSEVAEDISKITTIDALRSFYGLYYISKIEYGAILDLKITLESSDKKKMENIKGELSGSVTIGALSLSVKGHIDKEDSSSTSRLKVTSSVLLGGSVLIDKTDVKNFDEAMDVINKFK--VDPERLVPVRMEVSKIPPRVTPIL-SIDPLTLNHYENKLKSVGSFYWEFQQMILQLD-AFKKLISPFL--GDDE--------MAIYIKELVSDVSY-----QITSLEVTKDSIIKFIQGTMTNILNSDIPCSEASVSQNKVNAQQMIGSVVTETEFGRWIGPTVTDKKLPTYKGTYKYKDGSK---YEGFCLNGKRHGKGILKYQDGNI 426 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig87.20237.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig87.20237.1 >prot_S-ischiensis_contig87.20237.1 ID=prot_S-ischiensis_contig87.20237.1|Name=mRNA_S-ischiensis_contig87.20237.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=566bp MPAVELYLPVTISAEGVPLDAPRPGDGFALSGSRTAPLQRAFGDAPGSTHback to top mRNA from alignment at S-ischiensis_contig87:143721..162836- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig87.20237.1 ID=mRNA_S-ischiensis_contig87.20237.1|Name=mRNA_S-ischiensis_contig87.20237.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=19116bp|location=Sequence derived from alignment at S-ischiensis_contig87:143721..162836- (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig87:143721..162836- >mRNA_S-ischiensis_contig87.20237.1 ID=mRNA_S-ischiensis_contig87.20237.1|Name=mRNA_S-ischiensis_contig87.20237.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=3396bp|location=Sequence derived from alignment at S-ischiensis_contig87:143721..162836- (Schizocladia ischiensis KU_0333)back to top |