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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Model size | 503 |
| Cds size | 489 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817349.9451234-CDS-S-ischiensis_contig87:428282..428549 | 1622817349.9451234-CDS-S-ischiensis_contig87:428282..428549 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig87 428283..428549 - |
| 1695741047.525456-CDS-S-ischiensis_contig87:428282..428549 | 1695741047.525456-CDS-S-ischiensis_contig87:428282..428549 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig87 428283..428549 - |
| 1622817349.957518-CDS-S-ischiensis_contig87:429740..429842 | 1622817349.957518-CDS-S-ischiensis_contig87:429740..429842 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig87 429741..429842 - |
| 1695741047.5420606-CDS-S-ischiensis_contig87:429740..429842 | 1695741047.5420606-CDS-S-ischiensis_contig87:429740..429842 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig87 429741..429842 - |
| 1622817349.9686158-CDS-S-ischiensis_contig87:430614..430734 | 1622817349.9686158-CDS-S-ischiensis_contig87:430614..430734 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig87 430615..430734 - |
| 1695741047.5566218-CDS-S-ischiensis_contig87:430614..430734 | 1695741047.5566218-CDS-S-ischiensis_contig87:430614..430734 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig87 430615..430734 - |
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817349.9807694-UTR-S-ischiensis_contig87:430734..430748 | 1622817349.9807694-UTR-S-ischiensis_contig87:430734..430748 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig87 430735..430748 - |
| 1695741047.5688658-UTR-S-ischiensis_contig87:430734..430748 | 1695741047.5688658-UTR-S-ischiensis_contig87:430734..430748 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig87 430735..430748 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig87.20271.1 >prot_S-ischiensis_contig87.20271.1 ID=prot_S-ischiensis_contig87.20271.1|Name=mRNA_S-ischiensis_contig87.20271.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=163bp
MSDATPRGRGRGRAKGQTGAGLAAGMRQPQDGGQDPFQRKDLRPLTGILS
LRGKPAAKDWACTVCGMTNEPESEPCKACGRACLPQWATDKAGRPLFPGV
VVNCTAPPPALASASPLATTAQSFTTMAKAATAAGAAVGAGARAAATGGG
GGSLAGRSPRSTR back to topmRNA from alignment at S-ischiensis_contig87:428283..430748- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-ischiensis_contig87.20271.1 ID=mRNA_S-ischiensis_contig87.20271.1|Name=mRNA_S-ischiensis_contig87.20271.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=2466bp|location=Sequence derived from alignment at S-ischiensis_contig87:428283..430748- (Schizocladia ischiensis KU_0333)
CTGGAGGGCCCGCCATGAGCGATGCCACGCCACGTGGCCGAGGGCGGGGT
CGGGCCAAGGGCCAGACGGGAGCTGGGCTGGCTGCTGGGATGCGTCAGCC
CCAAGACGGTGGGCAGGATCCATTCCAGAGGAAGGTGTGTACCGTGCTCA
GATAGAAAAAACATGCCGGGATGGTACGCCATACTTGGAAGTACACGTGC
AAGAACCATGTCAGACAACGTAGCCTCACTCCCACGTGCTCGGGGCCGGA
CATTGCCATGGTCTCGATACAGTAGATATCTCTTGGTTCATTGCTTCGAT
GTGCATGTGCAAAGGGGGAGCGGGTGTGTGTACAGCACCAAAGCTCTGAC
TGGGGTGTGGAGCCACTGAAGCCAAGACTCGCCAGCAGTGATCTCCTAAA
CCCCCTTTCCGCTGTGTAAGGCCCATTTTGATGGGGCCAAGCCGAGTCTA
CAGCTCTATGGGCCGGTGGTTCTCACCGAACTTTTGGCCCTTTTGGGCCT
CTCTGGCCTCCACCTCGCAGTACTTCCAGTACAACCAATCTAGGCAAAGT
GCTGCCGATCCCACCGCCTGGGACGGCTGAGGGAATGCTGTTCCTCATAG
CCACCTCTCGTGTGGAAGTGGTGCGAGGTGTGCAATGCCGAGGTGCCACG
CAACCCCCTCCCACGCATCTCCGGCCTCCTATCAGCCGCTGAATGCGGTA
CTCTCCCAAGCCACCGCCGGCCAAGCAAGCAATATGATGTCCGCGTGCCA
CCTCCGTTTTCGCACTCACCCTCCAAAGCAAGCCCTACCGCTGACTACAC
CCCCGCCGCTGCCCCTGCGCCAGTTTCTACCCCTGTAATGAGCGCCACAA
ATATGTCTATCCATCCTCCCACCCGTGTCCACATTCCACACCTACTACTG
GACTAGGACCTGCGACCGCTGACGGGCATCCTGTCCCTGCGGGGCAAGCC
CGCGGCCAAGGACTGGGCCTGCACGGTCTGCGGGATGACCAACGAGCCTG
AGAGTGAGGTCTGTGTCCCCCACAGTATACCCTTTGAGAACAACGGGACA
CTGGCTGGTACTTTTGTGATGTGTGCAATATATTGTCCTGCACTACAGTA
CTAGTACTTCGAAGTGCTCGAGTACACTGGCAAGTACTTCGAAGTACCGT
ACACGCACAATTCATACATAGTTTGACATCACATCGCATCAGCACGTGGC
AACTCGAACGTCAGAGTATCCCCGCAGCTTGAAAAGGATTTCCACCTCTT
CCTGAGCCCGTATCGGTACACTACGTTTACTTTCACTTGCGCCACGAGGG
TCCCTGAGACGTCCCTGAGATACTGGTGTGGCCGGTTTGTGCCATGCCTT
TTGTAGTACGACAGTCTGTGTAGAGTGTACTCTTTATCGATTATGTTCGG
TGGCATGCGAGATCCAGGCCCCGTGCCAACTGGGACCTCATTAGCAGAGT
GTTCCCTTCTTTCAGTCGGTATTGTGATGTGGTGTGATGCGATGCTATGT
GCACTCTAATTTACTGTAGTTTGACATCACATCACATCGAAATGGGAACC
TCACCGGAAGAGTTCACCCATCTTTCACTAGCAGGGCACAGCCACGCAGC
AAAAAGGCAACACGCTAAACTACAGCAGAAGTATCCATTTCAAGATAAGA
TGTTGAAAATGTTCTAAGGAGGCTGATGCACAATTAACACGAGAAGGAAA
CGGTCGTTTCCTTTCCGGCACTTTACTTCGAAGTACGGTTTCAATTTATC
CTCACGGCTGACCGGGGTGTTATTGCTTCGAAGTATATGACAAATGCCCT
TGCAGCTATTCAACACATGTACGCTGCAAAACGTGGACGGGGCAAGGGCC
GGCAGAAATACTTCCAGCCTTTCACATTCGCGCTCCGAAACACACCTTGT
AGTTCGAGGCATTTCTTAGAGGGCCACACAACCCCCAAGGCCCACCCTCA
ACCCGTGGTGGATCCCGAGCGGCCCGCTAACCGAGTGTTCGGTCGTCTGC
CGGTGACATGTGATGTGATGTGATGTGATGTGCACACTAGTGTACTGCAG
TTTGACATCACGTCATATCACATCGCATCGCATCGCGTCACATCATATTA
AATGCACTGCGCCGTCCTCGACCTCCTCCTCCTCCTCCTTCAAAGGTCGA
GAGTTCCACAGCATACCAATATCCCCCCCTGTCCCGGTCCCCTGCACAGC
CCTGCAAGGCGTGCGGCCGCGCCTGCCTCCCCCAGTGGGCCACGGACAAG
GCCGGCCGGCCGCTCTTCCCCGGCGTGGTCGTCAACTGCACCGCACCGCC
GCCCGCACTGGCATCGGCTTCTCCCCTCGCGACTACTGCACAGTCTTTCA
CCACAATGGCTAAGGCTGCCACCGCCGCCGGCGCCGCCGTCGGCGCTGGC
GCCCGGGCTGCCGCTACTGGAGGAGGGGGCGGGTCACTAGCCGGTCGAAG
CCCGAGGAGTACTAGG back to topCoding sequence (CDS) from alignment at S-ischiensis_contig87:428283..430748- >mRNA_S-ischiensis_contig87.20271.1 ID=mRNA_S-ischiensis_contig87.20271.1|Name=mRNA_S-ischiensis_contig87.20271.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=978bp|location=Sequence derived from alignment at S-ischiensis_contig87:428283..430748- (Schizocladia ischiensis KU_0333)
ATGAGCGATGCCACGCCACGTGGCCGAGGGCGGGGTCGGGCCAAGGGCCA
GACGGGAGCTGGGCTGGCTGCTGGGATGCGTCAGCCCCAAGACGGTGGGC
AGGATCCATTCCAGAGGAAGATGAGCGATGCCACGCCACGTGGCCGAGGG
CGGGGTCGGGCCAAGGGCCAGACGGGAGCTGGGCTGGCTGCTGGGATGCG
TCAGCCCCAAGACGGTGGGCAGGATCCATTCCAGAGGAAGGACCTGCGAC
CGCTGACGGGCATCCTGTCCCTGCGGGGCAAGCCCGCGGCCAAGGACTGG
GCCTGCACGGTCTGCGGGATGACCAACGAGCCTGAGAGTGAGGACCTGCG
ACCGCTGACGGGCATCCTGTCCCTGCGGGGCAAGCCCGCGGCCAAGGACT
GGGCCTGCACGGTCTGCGGGATGACCAACGAGCCTGAGAGTGAGCCCTGC
AAGGCGTGCGGCCGCGCCTGCCTCCCCCAGTGGGCCACGGACAAGGCCGG
CCGGCCGCTCTTCCCCGGCGTGGTCGTCAACTGCACCGCACCGCCGCCCG
CACTGGCATCGGCTTCTCCCCTCGCGACTACTGCACAGTCTTTCACCACA
ATGGCTAAGGCTGCCACCGCCGCCGGCGCCGCCGTCGGCGCTGGCGCCCG
GGCTGCCGCTACTGGAGGAGGGGGCGGGTCACTAGCCGGTCGAAGCCCGA
GGAGTACTAGGCCCTGCAAGGCGTGCGGCCGCGCCTGCCTCCCCCAGTGG
GCCACGGACAAGGCCGGCCGGCCGCTCTTCCCCGGCGTGGTCGTCAACTG
CACCGCACCGCCGCCCGCACTGGCATCGGCTTCTCCCCTCGCGACTACTG
CACAGTCTTTCACCACAATGGCTAAGGCTGCCACCGCCGCCGGCGCCGCC
GTCGGCGCTGGCGCCCGGGCTGCCGCTACTGGAGGAGGGGGCGGGTCACT
AGCCGGTCGAAGCCCGAGGAGTACTAGG back to top
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