prot_S-ischiensis_contig86.20210.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig86.20210.1
Unique Nameprot_S-ischiensis_contig86.20210.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length213
Homology
BLAST of mRNA_S-ischiensis_contig86.20210.1 vs. uniprot
Match: D8LG45_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LG45_ECTSI)

HSP 1 Score: 98.2 bits (243), Expect = 5.760e-21
Identity = 74/190 (38.95%), Postives = 100/190 (52.63%), Query Frame = 0
Query:   30 ALPHRARRGW-RLVAYLGVIAFRTLGLYTGLGLLEGCLQPQTARDTDCWYAHLRRSGICAGAYFDTADHVILALCQFLCIQAVETFGLLSEWRARRRWRRRWGAGGQASQHP------------GGXXSRDGGALLLQAARVSALLA---CVAVSVAALAMCYDTVSFFHTRGESMVALAVSAAAVWWPL 203
            A P R R  W R + Y+ VI  RTLGLY GL  ++G +Q + +  ++CWYAHLRRSG C+  +FD ADHV+LA+CQ+  IQ  E   +L E+    R      +G Q    P              XX       L  +  +S L A   C AV+ AAL + YDT + FH+R E++ AL +S   V  PL
Sbjct:  107 ATPSRTRARWNRFLLYVAVILGRTLGLYLGLNYIQGLVQSEES--SNCWYAHLRRSGKCS-EHFDFADHVVLAVCQYYAIQVFELCCILREYGDFSRQAAAIASGLQRKPSPTPSXXXXXXXXXXXXXXXXXXXXLRPSPFLSVLPAAAVCAAVAGAALLLVYDTAALFHSRAETVAALVISWFVVGEPL 293          
BLAST of mRNA_S-ischiensis_contig86.20210.1 vs. uniprot
Match: A0A833SRV2_PHYIN (Uncharacterized protein n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833SRV2_PHYIN)

HSP 1 Score: 65.1 bits (157), Expect = 5.710e-9
Identity = 56/170 (32.94%), Postives = 77/170 (45.29%), Query Frame = 0
Query:   36 RRGWRLVAYLGVIAFRTLGLYTGLGLLEGCLQPQTARDTD--CWYAHLRRSGICAGAYFDTADHVILALCQFLCIQAVETFGLLSEWRARRRWRRRWGAGGQASQHPGGXXSRDGGALLLQAARVSALLACVAVSVAALAMCYDTVSFFHTRGESMVALAVSAAAVWWPL 203
            RRG   + Y+ V+AFRT+ LY GLGL+E  L       +D  CWYA LRR   C  A FD +DH++L +  +L I   E F +  E                 S  P            L+   + A L CV     A  + + T S+FHT  E++V L ++   V  PL
Sbjct:  137 RRG---LLYVAVMAFRTVALYMGLGLIEKRLIHLFMGHSDHSCWYADLRRGKRCP-ANFDHSDHIVLLVGHYLAISLFEWFAVSVE-----------------SAGPS-----------LKRTLLRAWLICV--GALATYLLFFTASYFHTAAENLVGLIIAQGCVMAPL 272          
BLAST of mRNA_S-ischiensis_contig86.20210.1 vs. uniprot
Match: A0A0P1AGP8_PLAHL (Uncharacterized protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AGP8_PLAHL)

HSP 1 Score: 63.9 bits (154), Expect = 1.430e-8
Identity = 34/81 (41.98%), Postives = 48/81 (59.26%), Query Frame = 0
Query:   36 RRGWRLVAYLGVIAFRTLGLYTGLGLLEGCLQPQTARDTDCWYAHLRRSGICAGAYFDTADHVILALCQFLCIQAVETFGL 116
            RRG   + Y+ V+AFRT+ LY GLGL+E  +   T R + CWYA LR    C  A FD +DH++L +  ++ I   E F +
Sbjct:  137 RRG---LLYVAVMAFRTVVLYIGLGLIEERMLHLTGRSSSCWYADLRHGKRCP-ANFDHSDHIVLLVSHYMAIPLFEWFAV 213          
BLAST of mRNA_S-ischiensis_contig86.20210.1 vs. uniprot
Match: W2PVG2_PHYPN (Uncharacterized protein n=11 Tax=Phytophthora TaxID=4783 RepID=W2PVG2_PHYPN)

HSP 1 Score: 62.4 bits (150), Expect = 5.020e-8
Identity = 52/170 (30.59%), Postives = 75/170 (44.12%), Query Frame = 0
Query:   36 RRGWRLVAYLGVIAFRTLGLYTGLGLLEGCLQPQTARDTD--CWYAHLRRSGICAGAYFDTADHVILALCQFLCIQAVETFGLLSEWRARRRWRRRWGAGGQASQHPGGXXSRDGGALLLQAARVSALLACVAVSVAALAMCYDTVSFFHTRGESMVALAVSAAAVWWPL 203
            RRG   + Y+ ++AFRT+ LY GLGL+E  L       +D  CWYA LRR   C  A FD +DH++L +  +L I   E F +  E                            G +L     R   ++ C   S     + + T S+FHT  E++V L ++   V  PL
Sbjct:  137 RRG---LLYVAIMAFRTVVLYMGLGLVEKRLIHLFMGHSDHSCWYAELRRGKRCP-ADFDHSDHIVLLVSHYLAIPLFEWFAVSVE--------------------------SAGPSLKRTLLRAWLIIVCGMASY----LLFFTASYFHTTAENLVGLIIAQGCVMAPL 272          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig86.20210.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LG45_ECTSI5.760e-2138.95Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A833SRV2_PHYIN5.710e-932.94Uncharacterized protein n=1 Tax=Phytophthora infes... [more]
A0A0P1AGP8_PLAHL1.430e-841.98Uncharacterized protein n=1 Tax=Plasmopara halsted... [more]
W2PVG2_PHYPN5.020e-830.59Uncharacterized protein n=11 Tax=Phytophthora TaxI... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 63..97
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 41..62
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 119..159
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 189..209
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 98..118
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..40
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 210..212
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 184..188
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 160..183
NoneNo IPR availableTMHMMTMhelixcoord: 41..63
NoneNo IPR availableTMHMMTMhelixcoord: 98..120
NoneNo IPR availableTMHMMTMhelixcoord: 158..180
NoneNo IPR availableTMHMMTMhelixcoord: 190..209

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig86contigS-ischiensis_contig86:472495..474554 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig86.20210.1mRNA_S-ischiensis_contig86.20210.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig86 471915..475853 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig86.20210.1 ID=prot_S-ischiensis_contig86.20210.1|Name=mRNA_S-ischiensis_contig86.20210.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=213bp
MCVLYCNVLWFDGISHQDLSDEYGMHCTNALPHRARRGWRLVAYLGVIAF
RTLGLYTGLGLLEGCLQPQTARDTDCWYAHLRRSGICAGAYFDTADHVIL
ALCQFLCIQAVETFGLLSEWRARRRWRRRWGAGGQASQHPGGGGSRDGGA
LLLQAARVSALLACVAVSVAALAMCYDTVSFFHTRGESMVALAVSAAAVW
WPLGTYVTAEAD*
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