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Homology
BLAST of mRNA_S-ischiensis_contig84.20082.1 vs. uniprot
Match: D7G927_ECTSI (Soluble NSF Attachment Protein (SNAP) Receptor (SNARE) n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G927_ECTSI) HSP 1 Score: 362 bits (930), Expect = 3.880e-119 Identity = 179/198 (90.40%), Postives = 189/198 (95.45%), Query Frame = 1
Query: 61 MKIVGIAVLRSNRDTAEPVMLSQVNELSSFGFFQRQGIKEMCTFFSKTIVKRTQPGMRQSVQHEDYNVHVYMRHDGLAGTVTADMEYPPRVAFVLLTQLLEQYGEQVKWQSEIRHEAIRFPPMEQAIIDYQDPAKADKITKIQRDLDETTDVLHRTIDSVLERGVKLDELVDRSDDLSRQSKMFYKQARKTNSCCVVS 654
MK+V I +R NRDTAEPVMLSQVNELSS+GFFQRQGIKEMCTFFSKTIVKRTQPG RQSVQHEDYNVHVYMR DGLAGTVTAD+EYPPRVAFVLLTQLLEQY EQV WQSEIRHEAIRFPPM++ I+DYQDPAKADKITKIQRDLDETT+VLHRTID+VLERGV+LDELVDRSDDLSRQSKMFYKQARKTNSCCVVS
Sbjct: 1 MKVVSICTMRYNRDTAEPVMLSQVNELSSYGFFQRQGIKEMCTFFSKTIVKRTQPGQRQSVQHEDYNVHVYMRQDGLAGTVTADLEYPPRVAFVLLTQLLEQYAEQVSWQSEIRHEAIRFPPMDKMIVDYQDPAKADKITKIQRDLDETTEVLHRTIDNVLERGVRLDELVDRSDDLSRQSKMFYKQARKTNSCCVVS 198
BLAST of mRNA_S-ischiensis_contig84.20082.1 vs. uniprot
Match: A0A836CN50_9STRA (Soluble NSF attachment protein receptor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN50_9STRA) HSP 1 Score: 310 bits (794), Expect = 9.090e-99 Identity = 151/197 (76.65%), Postives = 175/197 (88.83%), Query Frame = 1
Query: 61 MKIVGIAVLRSNRDTAEPVMLSQVNELSSFGFFQRQGIKEMCTFFSKTIVKRTQPGMRQSVQHEDYNVHVYMRHDGLAGTVTADMEYPPRVAFVLLTQLLEQYGEQVKWQSEIRHEAIRFPPMEQAIIDYQDPAKADKITKIQRDLDETTDVLHRTIDSVLERGVKLDELVDRSDDLSRQSKMFYKQARKTNSCCVV 651
MKI+ I +LR DT E ++LSQ ++LSSFGFFQR GIKEMCTFFSKTIVKRT G RQ+VQHEDYNVHVY+RHDGLA T+TADMEYP RVAFVLL +++Q+ EQ++WQ+E R EAI F PM+QAI+DYQDPAKADKITKIQRDLD+TT+VLH+TI+SVLERGVKLD+LVDRSD LSRQSKMFYKQA+KTNSCCVV
Sbjct: 1 MKILAITMLRYGADTPEAIVLSQASDLSSFGFFQRAGIKEMCTFFSKTIVKRTPAGQRQTVQHEDYNVHVYVRHDGLAATITADMEYPMRVAFVLLMNMMDQFSEQIQWQAETREEAIVFAPMQQAIVDYQDPAKADKITKIQRDLDDTTNVLHKTIESVLERGVKLDDLVDRSDSLSRQSKMFYKQAKKTNSCCVV 197
BLAST of mRNA_S-ischiensis_contig84.20082.1 vs. uniprot
Match: A0A7S2V281_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V281_9STRA) HSP 1 Score: 287 bits (734), Expect = 8.760e-90 Identity = 139/200 (69.50%), Postives = 174/200 (87.00%), Query Frame = 1
Query: 61 MKIVGIAVLRSNRDTAEPVMLSQVNELSSFGFFQRQGIKEMCTFFSKTIVKRTQPGMRQSVQHE--DYNVHVYMRHDGLAGTVTADMEYPPRVAFVLLTQLLEQYGEQVK-WQSEIRHEAIRFPPMEQAIIDYQDPAKADKITKIQRDLDETTDVLHRTIDSVLERGVKLDELVDRSDDLSRQSKMFYKQARKTNSCCVV 651
MK++ +A+LR RDTAEPVMLSQ +LSS GFFQR G+KE+ TFF++ +VKRT PGMRQ+VQH DYNVHVY+R DGLAG VT+DMEYPPRVAFV+LTQLL+Q+ V+ W++EIR EAI++PP+ +A+I YQDPA+ADK+TKIQRDLD+TT++LH+TID+VLERG KLD LV+RSDDLSRQSK+FY QARK NSCC++
Sbjct: 1 MKLISVAILRYMRDTAEPVMLSQAADLSSIGFFQRNGVKELLTFFARMLVKRTSPGMRQTVQHNEFDYNVHVYVRADGLAGAVTSDMEYPPRVAFVMLTQLLDQFALDVRGWETEIRSEAIQWPPLGEALIRYQDPAEADKVTKIQRDLDQTTEILHKTIDNVLERGEKLDSLVERSDDLSRQSKLFYSQARKANSCCLI 200
BLAST of mRNA_S-ischiensis_contig84.20082.1 vs. uniprot
Match: W7TQ86_9STRA (Vamp-like protein ykt62 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQ86_9STRA) HSP 1 Score: 281 bits (720), Expect = 9.840e-88 Identity = 135/199 (67.84%), Postives = 168/199 (84.42%), Query Frame = 1
Query: 61 MKIVGIAVLRSNRDTAEPVMLSQVNELSSFGFFQRQGIKEMCTFFSKTIVKRTQPGMRQSVQHEDYNVHVYMRHDGLAGTVTADMEYPPRVAFVLLTQLLEQYGEQV-KWQSEIRHEAIRFPPMEQAIIDYQDPAKADKITKIQRDLDETTDVLHRTIDSVLERGVKLDELVDRSDDLSRQSKMFYKQARKTNSCCVVS 654
MKIV IA+ R RDT EP++LS V EL SFG+FQR GI+EMC F SKT++KR QPG RQ++QHE+YNVH ++R DGL GTV AD+EYPPRVAFVLL+ LLE++ + W S + E++ +PP+++AI +YQDPAKADKITKI+RDLDETTD+LH+TID+VLERGVKLDELV+RS+DLS QSK+FYKQARKTNSCC +S
Sbjct: 1 MKIVAIALHRYQRDTPEPIILSSVTELESFGYFQRNGIREMCRFMSKTLIKRCQPGQRQTIQHEEYNVHCHLRTDGLGGTVIADLEYPPRVAFVLLSTLLERFAVDITNWSSVTQQESVTYPPLQEAIREYQDPAKADKITKIRRDLDETTDILHKTIDAVLERGVKLDELVERSNDLSSQSKLFYKQARKTNSCCSIS 199
BLAST of mRNA_S-ischiensis_contig84.20082.1 vs. uniprot
Match: A0A6T5MNT8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5MNT8_HETAK) HSP 1 Score: 271 bits (694), Expect = 7.850e-84 Identity = 133/201 (66.17%), Postives = 165/201 (82.09%), Query Frame = 1
Query: 61 MKIVGIAVLRSNRDTAEPVMLSQVNELSSFGFFQRQGIKEMCTFFSKTIVKRTQPGMRQSVQHE--DYNVHVYMRHDGLAGTVTADMEYPPRVAFVLLTQLLEQYGEQVK--WQSEIRHEAIRFPPMEQAIIDYQDPAKADKITKIQRDLDETTDVLHRTIDSVLERGVKLDELVDRSDDLSRQSKMFYKQARKTNSCCVV 651
MKIV IA+LR RD EPVML+Q +LSS GFFQR G++E+ TFFSK +VKRT+PG RQ+VQH DYNVH Y+R DGL+GTVTADMEYP RVAF+LLTQLL+QY ++ W+ E R+E I FPP +QA++ YQDPA ADK+TKIQRDLD+TT++L+ TID+VL RG KLD LV+RSD+LSRQSKMFY QA++ NSCC++
Sbjct: 1 MKIVSIAILRYGRDVEEPVMLTQACDLSSLGFFQRSGVRELLTFFSKLMVKRTEPGTRQTVQHNEFDYNVHTYVRADGLSGTVTADMEYPARVAFLLLTQLLDQYATELSGVWERETRNEVIAFPPADQALVQYQDPAAADKVTKIQRDLDQTTEILYNTIDNVLARGEKLDNLVERSDELSRQSKMFYSQAKRANSCCLI 201
BLAST of mRNA_S-ischiensis_contig84.20082.1 vs. uniprot
Match: A0A6U0IUG2_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A6U0IUG2_9STRA) HSP 1 Score: 270 bits (691), Expect = 3.400e-83 Identity = 133/200 (66.50%), Postives = 162/200 (81.00%), Query Frame = 1
Query: 61 MKIVGIAVLRSNRDTAEPVMLSQVNELSSFGFFQRQGIKEMCTFFSKTIVKRTQPGMRQSVQHEDYNVHVYMRHDGLAGTVTADMEYPPRVAFVLLTQLLEQYGEQV--KWQSEIRHEAIRFPPMEQAIIDYQDPAKADKITKIQRDLDETTDVLHRTIDSVLERGVKLDELVDRSDDLSRQSKMFYKQARKTNSCCVVS 654
MK+V IA+LR+ D AEP+ +S ELSS+GFFQRQG+KEM TFFSKT KRT PG RQS++HE Y VH Y+R DGLAGTVT D+EYP RVAFVLLTQLL+++ + V W+S E++ FP +E+ + YQDPA ADK+TKIQ+DLDETT +LH+TIDSVLERGVKLD LV+RS+DLS QSKMFYKQA+KTNSCC +S
Sbjct: 16 MKVVSIAILRTGPDVAEPIPVSMACELSSYGFFQRQGVKEMLTFFSKTFTKRTDPGQRQSIEHESYVVHCYVRSDGLAGTVTTDLEYPARVAFVLLTQLLDEFQQTVGDSWRSVTTPESVTFPKIEEYLQKYQDPAAADKVTKIQQDLDETTQILHKTIDSVLERGVKLDSLVERSNDLSAQSKMFYKQAKKTNSCCTIS 215
BLAST of mRNA_S-ischiensis_contig84.20082.1 vs. uniprot
Match: A0A7R9W5E6_9STRA (Hypothetical protein n=4 Tax=Eupodiscales TaxID=33838 RepID=A0A7R9W5E6_9STRA) HSP 1 Score: 269 bits (687), Expect = 2.060e-82 Identity = 132/207 (63.77%), Postives = 164/207 (79.23%), Query Frame = 1
Query: 40 AARRGGAMKIVGIAVLRSNRDTAEPVMLSQVNELSSFGFFQRQGIKEMCTFFSKTIVKRTQPGMRQSVQHEDYNVHVYMRHDGLAGTVTADMEYPPRVAFVLLTQLLEQYGEQV--KWQSEIRHEAIRFPPMEQAIIDYQDPAKADKITKIQRDLDETTDVLHRTIDSVLERGVKLDELVDRSDDLSRQSKMFYKQARKTNSCCVVS 654
+A + +K+VGI++LR+ D +P+ L ELSSFGFFQRQG+KEM TFFSKT KRTQPG RQS+ HE Y VH Y+R DGLAG VT D+EYP RVAFVLLTQ+L+++ V W++ E++ FPP+E + YQDPA ADK+TKIQ+DLDETT +LH+TIDSVLERG KLD+LV+RSDDLS+QSKMFYKQA+KTNSCCV+S
Sbjct: 22 SAAKKTMVKVVGISILRTGSDLPDPIPLCMACELSSFGFFQRQGVKEMLTFFSKTFTKRTQPGQRQSITHEQYVVHCYVRSDGLAGAVTTDLEYPARVAFVLLTQILDEFTGAVGDSWKTVTTPESVSFPPIENYLQKYQDPATADKVTKIQKDLDETTQILHKTIDSVLERGSKLDDLVERSDDLSKQSKMFYKQAKKTNSCCVIS 228
BLAST of mRNA_S-ischiensis_contig84.20082.1 vs. uniprot
Match: A0A6T5VLC8_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus aporus TaxID=1398097 RepID=A0A6T5VLC8_9STRA) HSP 1 Score: 266 bits (680), Expect = 8.690e-82 Identity = 129/199 (64.82%), Postives = 165/199 (82.91%), Query Frame = 1
Query: 61 MKIVGIAVLRSNRDTAEPVMLSQVNELSSFGFFQRQGIKEMCTFFSKTIVKRTQPGMRQSVQHEDYNVHVYMRHDGLAGTVTADMEYPPRVAFVLLTQLLEQYGEQV--KWQSEIRHEAIRFPPMEQAIIDYQDPAKADKITKIQRDLDETTDVLHRTIDSVLERGVKLDELVDRSDDLSRQSKMFYKQARKTNSCCVV 651
MK+VG+++LR+ EP+ L+ N+LSSFG+FQRQG+ EM TFFSKT KRTQPG RQSV HE Y VH Y+R DGLAGTVT+D+EYP RVAFV+LTQ+L+ + +Q W+ E R E++ FP ME+ + +Q+PA+ADK++KIQ+DLDETT++LH+TIDSVLERGVKLD LV+RSDDLSRQSKMFYKQA+KTNSCC++
Sbjct: 1 MKVVGLSILRTGPSLDEPLPLAVANDLSSFGYFQRQGVSEMLTFFSKTFSKRTQPGQRQSVTHESYIVHCYVRGDGLAGTVTSDLEYPARVAFVMLTQMLDDFVQQFGDSWKRETRPESMTFPKMEEYLEKFQNPAEADKLSKIQKDLDETTEILHQTIDSVLERGVKLDALVERSDDLSRQSKMFYKQAKKTNSCCII 199
BLAST of mRNA_S-ischiensis_contig84.20082.1 vs. uniprot
Match: A0A7S2I938_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2I938_9STRA) HSP 1 Score: 268 bits (684), Expect = 1.610e-81 Identity = 133/205 (64.88%), Postives = 162/205 (79.02%), Query Frame = 1
Query: 46 RRGGAMKIVGIAVLRSNRDTAEPVMLSQVNELSSFGFFQRQGIKEMCTFFSKTIVKRTQPGMRQSVQHEDYNVHVYMRHDGLAGTVTADMEYPPRVAFVLLTQLLEQYGEQV--KWQSEIRHEAIRFPPMEQAIIDYQDPAKADKITKIQRDLDETTDVLHRTIDSVLERGVKLDELVDRSDDLSRQSKMFYKQARKTNSCCVVS 654
R MKIVG+ +LR+ +D EP+ L+ +LSS+G+FQRQG+KEM TFFSKT KRT PG RQS+ HE Y VH Y+R DGLAG VT+D EYP RVAFVLLTQLLE++ + V W++ E++ FPP+E + YQDPA ADK+TKIQ+DLDETT VLH+TIDSVLERG KLD LV++SDDLSRQSKMFYKQA+KTNSCCV+S
Sbjct: 55 RTKNKMKIVGLTILRTGKDVEEPIPLTTACDLSSYGYFQRQGVKEMLTFFSKTFTKRTAPGQRQSITHESYVVHCYVRSDGLAGVVTSDAEYPSRVAFVLLTQLLEEFLQTVGDSWKTVTAPESVAFPPIETYLQKYQDPAAADKVTKIQQDLDETTSVLHKTIDSVLERGEKLDSLVEKSDDLSRQSKMFYKQAKKTNSCCVIS 259
BLAST of mRNA_S-ischiensis_contig84.20082.1 vs. uniprot
Match: A0A7S3PDT7_9STRA (Hypothetical protein n=2 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3PDT7_9STRA) HSP 1 Score: 261 bits (667), Expect = 7.280e-80 Identity = 130/200 (65.00%), Postives = 160/200 (80.00%), Query Frame = 1
Query: 61 MKIVGIAVLRSNRDTAEPVMLSQVNELSSFGFFQRQGIKEMCTFFSKTIVKRTQPGMRQSVQHEDYNVHVYMRHDGLAGTVTADMEYPPRVAFVLLTQLLEQYGEQV--KWQSEIRHEAIRFPPMEQAIIDYQDPAKADKITKIQRDLDETTDVLHRTIDSVLERGVKLDELVDRSDDLSRQSKMFYKQARKTNSCCVVS 654
MK+VG+AV R+ D EP+ L+ N+LSSFGFFQRQ +KEM F +KT +KRT+PG RQSV+HE Y VH Y+R DGLAGTVT DMEYP RVAFV+L QLL++Y +Q W+S E+I FP E + YQ+PA+ADK+TKIQ+DLDETT +LH+TIDSVLERGVKLD LV++S+DLS QSKMFYKQA+KTNSCCV+S
Sbjct: 1 MKVVGVAVARTGADLNEPIPLTVCNDLSSFGFFQRQSVKEMLLFLTKTFLKRTEPGQRQSVEHEGYVVHCYVRSDGLAGTVTTDMEYPARVAFVMLGQLLDEYTQQHGDAWKSATEPESIPFPKAETYVQKYQNPAEADKVTKIQKDLDETTQILHKTIDSVLERGVKLDNLVEKSNDLSAQSKMFYKQAKKTNSCCVIS 200
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 365.9 |
| Seed ortholog evalue | 1.2e-98 |
| Seed eggNOG ortholog | 2880.D7G927 |
| Preferred name | YKT6 |
| KEGG rclass | RC00438,RC00439,RC00603,RC00604 |
| KEGG ko | ko:K01623,ko:K08516,ko:K18999 |
| KEGG Reaction | R01068,R01070,R01829,R02568 |
| KEGG Pathway | ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04130,ko04138,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04130,map04138 |
| KEGG Module | M00001,M00003,M00165,M00167 |
| GOs | GO:0000139,GO:0000149,GO:0000322,GO:0000323,GO:0000324,GO:0003674,GO:0003824,GO:0005484,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005768,GO:0005773,GO:0005783,GO:0005793,GO:0005794,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0006886,GO:0006887,GO:0006888,GO:0006890,GO:0006891,GO:0006903,GO:0006904,GO:0006906,GO:0006996,GO:0007033,GO:0008104,GO:0008150,GO:0009987,GO:0012505,GO:0012506,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0016050,GO:0016192,GO:0016197,GO:0016409,GO:0016417,GO:0016482,GO:0016740,GO:0016746,GO:0016747,GO:0019706,GO:0019707,GO:0022406,GO:0030133,GO:0030425,GO:0030659,GO:0031090,GO:0031201,GO:0031224,GO:0031226,GO:0031410,GO:0031982,GO:0031984,GO:0032940,GO:0032991,GO:0033036,GO:0033116,GO:0034613,GO:0036477,GO:0042144,GO:0042147,GO:0042886,GO:0042995,GO:0043005,GO:0043025,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044297,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044433,GO:0044444,GO:0044446,GO:0044459,GO:0044463,GO:0044464,GO:0045184,GO:0046903,GO:0046907,GO:0048193,GO:0048278,GO:0048284,GO:0051179,GO:0051234,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0061024,GO:0061025,GO:0070727,GO:0071702,GO:0071705,GO:0071840,GO:0071944,GO:0090174,GO:0097440,GO:0097441,GO:0097447,GO:0097458,GO:0097576,GO:0097708,GO:0098588,GO:0098791,GO:0098796,GO:0120025,GO:0120038,GO:0140029,GO:0140056,GO:0140096 |
| EggNOG free text desc. | SNAP receptor activity |
| EggNOG OGs | COG5143@1,KOG0861@2759 |
| EC | 3.1.3.16,4.1.2.13 |
| COG Functional cat. | U |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko00002,ko01000,ko01009,ko03021,ko03036,ko04131,ko04147 |
| Hectar predicted targeting category | other localisation |
| Exons | 5 |
| Model size | 2015 |
| Cds size | 597 |
| Stop | 1 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622817337.8718066-UTR-S-ischiensis_contig84:542485..543843 | 1622817337.8718066-UTR-S-ischiensis_contig84:542485..543843 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig84 542486..543843 - |
| 1695741038.4645274-UTR-S-ischiensis_contig84:542485..543843 | 1695741038.4645274-UTR-S-ischiensis_contig84:542485..543843 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig84 542486..543843 - |
| 1622817337.939304-UTR-S-ischiensis_contig84:550486..550546 | 1622817337.939304-UTR-S-ischiensis_contig84:550486..550546 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig84 550487..550546 - |
| 1695741038.535149-UTR-S-ischiensis_contig84:550486..550546 | 1695741038.535149-UTR-S-ischiensis_contig84:550486..550546 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig84 550487..550546 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622817337.8828251-CDS-S-ischiensis_contig84:543843..543981 | 1622817337.8828251-CDS-S-ischiensis_contig84:543843..543981 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig84 543844..543981 - |
| 1695741038.4791286-CDS-S-ischiensis_contig84:543843..543981 | 1695741038.4791286-CDS-S-ischiensis_contig84:543843..543981 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig84 543844..543981 - |
| 1622817337.8936772-CDS-S-ischiensis_contig84:544977..545142 | 1622817337.8936772-CDS-S-ischiensis_contig84:544977..545142 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig84 544978..545142 - |
| 1695741038.4919744-CDS-S-ischiensis_contig84:544977..545142 | 1695741038.4919744-CDS-S-ischiensis_contig84:544977..545142 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig84 544978..545142 - |
| 1622817337.904475-CDS-S-ischiensis_contig84:546826..546927 | 1622817337.904475-CDS-S-ischiensis_contig84:546826..546927 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig84 546827..546927 - |
| 1695741038.503465-CDS-S-ischiensis_contig84:546826..546927 | 1695741038.503465-CDS-S-ischiensis_contig84:546826..546927 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig84 546827..546927 - |
| 1622817337.9165788-CDS-S-ischiensis_contig84:547925..548008 | 1622817337.9165788-CDS-S-ischiensis_contig84:547925..548008 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig84 547926..548008 - |
| 1695741038.515753-CDS-S-ischiensis_contig84:547925..548008 | 1695741038.515753-CDS-S-ischiensis_contig84:547925..548008 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig84 547926..548008 - |
| 1622817337.9266155-CDS-S-ischiensis_contig84:550376..550486 | 1622817337.9266155-CDS-S-ischiensis_contig84:550376..550486 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig84 550377..550486 - |
| 1695741038.5250022-CDS-S-ischiensis_contig84:550376..550486 | 1695741038.5250022-CDS-S-ischiensis_contig84:550376..550486 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig84 550377..550486 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig84.20082.1 >prot_S-ischiensis_contig84.20082.1 ID=prot_S-ischiensis_contig84.20082.1|Name=mRNA_S-ischiensis_contig84.20082.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=199bp
MKIVGIAVLRSNRDTAEPVMLSQVNELSSFGFFQRQGIKEMCTFFSKTIV KRTQPGMRQSVQHEDYNVHVYMRHDGLAGTVTADMEYPPRVAFVLLTQLL EQYGEQVKWQSEIRHEAIRFPPMEQAIIDYQDPAKADKITKIQRDLDETT DVLHRTIDSVLERGVKLDELVDRSDDLSRQSKMFYKQARKTNSCCVVS* back to topmRNA from alignment at S-ischiensis_contig84:542486..550546- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-ischiensis_contig84.20082.1 ID=mRNA_S-ischiensis_contig84.20082.1|Name=mRNA_S-ischiensis_contig84.20082.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=8061bp|location=Sequence derived from alignment at S-ischiensis_contig84:542486..550546- (Schizocladia ischiensis KU_0333) GTCTGCTTCTGCCGCTGCCGCCAACGCCTGCCAGGTTGAGCGGCACGGCG
CGGAGGAGCCATGAAGATCGTCGGCATCGCCGTGCTCCGGAGTAACCGGG
ACACGGCGGAACCGGTGATGCTGTCGCAGGTTAACGAGCTGTCCTCCTTT
GGGTTCTTCCAGAGACAAGGGTGAGTGAGTGGCGCGGCCCGGCGATGATT
CATATAAATTGAAACGAGGTACAATCGCACGTGTGTGAGGTTGATTGTTC
TCGCATTACTGTTTGTGCAGCGGTATCGAGCGGTTCGTTTGGGCCGTGGT
TTCGGAGGAAAGCCAAGTAAGTGCCAGTTCAAAGTACCTGCTAGCAGTAC
AGTATCCTCATACAGTCAACGAGCTGTCCTCCTTTGGGTTCTTCCAGAGG
CAAGGGTGAGTGAGTGACGCGTCCCCCGGGGCGGTATCGATTGAGCAGTT
CGTTTGGGCCGTGGTTTTACGGAAAGCCAGGGAAGTGCTACTTACTTCGA
AGTACTCGCTAGCAGTACAGTACCGCAGTGGAAGTCGGATAAGCAACCCC
CTTTAGATAAGGAACCCCATTTAGGTTGGGAGCCCCCTTCGATTATTTTG
GGGTCGCGAAATTTATTGCGGGGGGTGACATTAAATGAGGAACCCACCCC
AATAATTACAAAAGGAACCCCCCTCGTGACGTTGGATAAGGAACCCCCTT
GGCCTCCACCACTCTGTCAGTGGGCCTCCCGTGGCAGGCACGCATGCCTG
ACCCGTGGCCCCGGGCCCGGACGATAGTACCGAACGCGTCCGGACGGTGA
TTCTTATCAGTTGTAACGAGGTACAATCGTACGTGTGTGAGATTGAGTGT
TCTCGTATTGCTAGTACAGTAGTAGTTGTCCCATTTAATAATTGAGTTTT
CTTATATTAGCGATTATCACGTCAAGGAACTAAGAGTAAGGAGGGGGAGA
AAATCGCGTTCGGACCATGGTGTCCATGCCCTCCCCTCCGTTGGCTCCCC
CCCTCTGTGGCGCGGCTCCGGGCAATTTCTCTCGGGGATGTGCACAGAGC
CGAAACGACGGTTTCACGGGCCTGCGCTCAATGCATTCCACGCCGCGAAT
CGCGCTTTGGTTCCTAGTACTATGAGTAGTAATAGCAATTTCGTGTGATC
CCACGCATTCTGGCGATATCTCCAATGCCCCATCGATCGATATATCGCTC
GAGCTATGGCAAAAAGCTCGCGGAAAACCCGCCCTGCCGGCTCTTCTTTT
TGCCCGCCCTTGCCTGTTCTGCCGTGAACTCAGAATGTCGAAACCCCCGC
ATCATTGAACCCCCCTCGGCCGCGCCCCCCCCAGGCGTAGAATATATCGA
AGCCCCCTTATCGGCCCCCCCTTGCTTTGCCTCATTTTGAGTATAAAACA
TCGATCCCACCCCCGCGTATTTACTGACCCCCCCCGGTATCGGTGAGCCC
GCCTGATTCGCTATCGAAGGGGCCCCCCTTGGATATCGAACTGCCGTCAG
ATAGCTAGCGCACCCCCTTCGATAATTTTGAGGCCCAGATCCGTATCGGC
CGGGGTTCCTTGTCCGACTTTCAGTACGGTATCCTCACTGTGAGCCATCT
GCACCGATCCTTCCATACGGGTCGTCCAGTCTTAGAGTCTACGGATTCGA
GAGTGCTTCGAAGTTCATGCTAAGTAGGCGCTGCTGTGCAGGTACTACAG
TTTTTTACGGTACTCGTACAGTATTACTGTACCGCTCGGTAAGGGTCACA
GGGCAAACCCGAAGTTTCGACTTAACCATATAGTGTATGGCTAAATAGCT
ACTCCTATCGGAGGGCAAACCCGAAGTTTCGACTTAGGGCTGTCGGCATT
GCACGCAAGGTTACGTCGCAAGACCAACCAATGAGTACATATATATATAT
ATATATATGTAATAGCATCTTCAGCCAAACGAGCGGGGGGATGTCTCAAC
GAGGCGCTTCCCCGTGGCTTGTTGTACCTGGGCCAGTCCGTCGGTCCGTC
CGTGCAGGGTTGGAACTTAGCCCGTACGTGGTGCCGTTTTTAATCCCTTA
ACTAGAGGTAATTAGGGGTAGTCAGACCTAAAATGAAGGCTAGTTAGGTT
ATCTTCATGCCAAAGTTAGAGGTATTTTGGGGTATTCAGACCTAAAATGA
AGGCTAATTAGGCTCTTATTAACCTCTATGTAAGTGCCAACCCTGCATCC
GTCCGTCCGTCCGTCACACCGCTCATCCCGCGCACGCCTTCCCCACGCAG
GATCAAGGAGATGTGCACCTTCTTCAGCAAAACCGTCTTAAATTAGACCT
GAAATGAAGACTAATTAGGCCCTAATCAAATTCTAAGTGCCAACCCTGCG
TCCATCCGCTCGTCCCACGCACGCCTCCCCCCCGCAGGATCAAGGAGATG
TGCACCTTCTTCAGCGAAATTAGAGGAAAGTAGGGGTAGTTATACGTAAA
AATGAAGACAAATTAGGCCCAATGACCTCTAAGTGCCAACCCTGCGTCCG
TCCGTCCGTCACATCCCGCGCACGTCTTCCCCCCTTAGGATCAAGGAGAT
GTGCACCTTCTTCAGCAAAACGATCGTCAAGCGGACGCAGCCCGGAATGA
GGCAGAGCGTGCAGCACGAAGGTGCGATGAGCAACTGGCCACAGGCCTGG
CACTTAGCCCCTAAGTGGTACCCTTTTAGGCCCTGAACTAGAGGTAGTTG
CGGGTAATTAGACCTAATATGAATACTTATTATGCCGTAATTAACCTGTA
CGTGCCAACCCTGACTGGCCACGCGCGCGGCCAGGGCCGGCCGGCGGTGT
TCCGCCTGCGGACTCCCAACCTTTTTACGCCGTTTTTTGGCGAGTTAGAG
CTGGTTGTAAGGAACCGGGTGATGTGCCCCCCCGCCCTCGCGTTAGAACG
CTGCTATGTATATGTAGATGCGATGTACCTTGTTACAATTTATATGAATC
TCCGCCGCCGTGTACCCCTTTGAGGGCAGTAGCACACTGGTTATGGGGGC
TGTGTGAGGAGTTTGCCCTTTTAACCCCTGGTAAATTGGACATAGAGTCA
AGAGAACTAGTTCACAAATGATTTTCGGATTTTCAGATATCGACAACGGC
CGAACTGCTGCCCCGATCGCGCTGCAAATCGGCGTGGAATGAGCCGGGGG
CACGGGCAAGACAGCCCAATCTCCTCAGCACCCTACTGTTCGAAACCGGA
CGGCGAAGGTGCCCCTGTTGTCGGGAAAACGATTTTTTAACTATGTTGAC
TGACTGTACACAGTGAACCCCTACCCGCATGACTATGCGGACCCCAGGGG
CAAAAGGGTTAGTTAGTGCACCATCGTCATCCAAGTGTTAAACCCACACT
GGTGCCGCACACTGAGCCGCTATGATTATACGGACCACAGGGGAAACAGG
GTTTAAGTTTCAGTAGTGCACCATCGTCGTCCAAGGGTTAAACCCACACT
GGTACCGCCCCCGACCCCCGCTCCCCACCACTACAATGTTGTAGCACGAG
AACACTCAATCTCACACGCATGTGATTTTACCTCGTTTCAGTTTATATAT
ATATATATATATACAATTTATCCGAATCACCCCCGCTCCCCCCCCCCCGC
GCCACCGGTCTGTGCGCAGATTACAACGTGCACGTGTACATGCGCCACGA
TGGGTTGGCGGGGACGGTGACGGCGGATATGGAGTACCCGCCTCGGGTGG
CGTTTGTCCTGCTCACACAGGTTGGTGGTGTTCTTCGTGGTTTGCCGTAC
TGGACAGTGTGTAATGACCCCCTTCGGGACAAACGGCAGGCGATTTTTTC
TCGCCGGATTGGTTTTCGATTGAATCGAAAACCCTCGGAATGATAGCCTT
TCGCCGAGACCGATTTGTCCCGAGGGTTTCCGATGCGATCGAAAACCGAT
CGAGCGAGAAAAAATTGCCCGCCGGTTGTCCCGAAGGGGTCGTCATACGC
GATCCTTTATGGTACCGCGTAATTCGTAGTTTGTATATTGTCTCAGCTCG
CTAAAGCGTGTCATCCTTTCAACCGTGCGTTGTTTTGCGGCATGTGTTTT
CATCTTGGCGCGGCTCTGCTGCGCTGTCTGTCAAAAGTTAGCAGCAGTCG
CACCCGATCACACCAAATGTTGTCCATTCAGTATCGTGTGTGCGTGTGTG
TGTGTGTGTGTGTATGTGTGTGTGTGTGTGTGTCTGTGTGTTTGCTTTGT
CTATTTGTCGCCACGCCGACTTTGGTCGTAGCAATCTGCGGAAGCGCATT
GACCCTGCTTGCTACGCTCGTGCCACCTCGTATCATTCAATTATGGAATA
TCTAAGCAAATCAACCTATTTATTTACAGTAGTGACTTTGCATTTTAAGT
TAGTTTGATGCCTGCGAGTTCCGGGCCCCGTCCCAACAACCTAAGGTGGG
GACCTCACCCAGAAGCCCTTCTCTTCACCCGCAGGGCACAAAAATCAAGA
ACATAAACCACTAAGGGGGCAATGCAGGGGCACTACAGGGGCAATATAGG
GGGGTCTCTCTCGTGCCGCGTTGGGGGCGTACCTGCGAGAGCATGCGCAC
GGGGAAGTTGTCGGGAGGCAGACGACCAGAGAAGGCATCAGCAAATGTGA
CGGGATGTACCGCGCACTTGCCACGTGACCAAACATATATATCGATAGTC
GTTATTCGATAGTTTGACCCACACTGAATCCAGGCGAGTGAAAGTAAGGG
CTTCTGGGGGTGGGGCCCTGACCCCGAGTACGAATACGTAGGAACGCCTC
TTCGTTCCCACTCGCTTGTTTATCTTCATGCAAAACACTGAATCCAAGTA
CTTCGAAGTAGTTAGTAACGCCACGCACAAAATCAGTCGAGCCCGATAAC
TATCTACTTACTGATCGATATTCCATCACTGGTATCTTTCAGCTGCTGGA
GCAGTACGGGGAGCAGGTGAAGTGGCAGTCGGAGATCCGGCACGAGACCA
TCCTTCTTTCCCACTCGGTTGTTTATCTTCTTGCAAACACATTAGTCGAG
CCCGATACTATCTACTTGCTGATCAATATTCCATCACTGGTGCTCGTATG
TCTCAGCTGCTGGGGCAGTACGGGGAGCAGGTGAAGTGGCAGTCGGAGAT
CCGGCACGAGGCCATCCGCTTCCCGCCCATGGAGCAGGCCATGGTTTGAC
CCGCACTGAATCCAAGTAGTTAATAACGCCACCCACAAAATCAGTCGATA
ACTATGTACTGATCGATATCCCATCGCTGGTATCTTTCAGTTCCTGGAGC
AGTACGGGGAGCAGGTGAAGTGGCAGTTGGCGATCCGGCACGAGGCCATC
CGCTCTGTCCCACTGTCCCCACTCGCTTGTTTATCTTCTTGCACAACAAT
CAGTCGATCCCGATAACTACCTACTGATCGATATTCCATCACTGGTATAT
CCAGCTGCTGGAGCAGTACGGGGAGCAGGTGAAGTGGCAGTCGGAGATCC
GGCACGAGGCCATCCGCTTCCCGCCCATGGAGCAGGCCATCATCGACTAC
CAGGACCCCGCCAAGGCCGACAAGATCACAAAGATACAGCGGGATCTTGA
CGAGACCACAGACGTGCTGGTGAGAAGAAGTTAACGTGACGTCAAAACTG
TTCTAAGATCACAAAGGTACAGCGGGATCTTGGCGAAACCATGGATGTGC
TGGTGAGAAGGATGTTTCGTGACGTCAAAACTGTTATAAGATCACAAAGA
TACAGCGGGATCTCGAAGAGACCACAGACGTGCTGGTGAGAAGGGTGGCA
CGAGAGAGACTCCCATGAATTGCCCCTGTTGCTTCTTGGCCTGATTTTTG
TGCCCTGCGCTTGAAATGAAGGGCTTCTGGTGAGGTCCCCACCTTAGGTT
TTTGGGACGAGGCCCGGAACTCGCATACCATCACACATAATAATTTGACA
AGGATGTTATGTGACATGAAATTGTTCTGGAGTGCTCGTGCCGTACACTG
TTGTGGAGTACTTACTCTCAAGCACGTGCGAGTACTTGGAAAAGTGCTCG
GATAGTACTGTAGTCGGATACCATAGACGTGCTGGTGAGAAGGATGTTAC
GCGACGTCAAACTGTTCTTTGCAAGTGCTCTGTTCTAGAGTGCTCTTGCC
GTACACTGTTGTGGAGTACGTGCTCCCAGGTACGTACTTCCACTCTTGGA
AAGTGCTCGGATAGTAGTCGGATGTATGCGCATGCTTGGTACTGTAGTAG
GTACTTCGAAGCACTTCTTATAGGCCCGGCGGGCCGGTGGAACCAACGAA
TGGAGACGGTGACTGGTCGTCAATCAACCCTATTGGGCATTTGTTGATCC
AACCTGACTTGGCTTAGCCGACCGGTATCTGCTGTATTGTGTAGTGAAGC
ACCTGCTACTAAAGTAGTGTGTAGTATGTACTGTACAGTAGTACTGTACA
GTAGTACTGTACTACAGTACGAGTACAGTAGTACATATGTGGTGCTGTAC
CACTGTACGCTACGTTGTACTTCCAAGTACGTACACAACACTGTAGCTTT
GCCAACCCTGCCATCCGTCCTGCCGAACTCCCCCCCCCCCCTCGCCCTCC
TCCCCCACCCGGCAGCACCGGACGATCGACAGCGTCCTGGAGCGGGGGGT
GAAGCTCGACGAGCTGGTGGACCGCTCGGACGACCTCAGCCGCCAGTCCA
AGATGTTCTACAAGCAAGCACGGAAGACCAACAGTTGTTGCGTCGTCTCA
TGAACAGAGCAGCAGACAGAGAGAGAGGAGGGGGCAGGGTACGCGGGCGG
CTGCCTTATACGGGGAGGTGGCGAACGCTATTTGGCACGCACAACGGCTC
TGCTGTATTGACACACCTAGAGGCCACGAAGAGAAGCTGGGTGGTGATGT
CTGGTGCGGGGGAGATTTTGGAGGGACATCGCCTATGAGCACCTCTGGGG
GTCTACAAGCTACGTGGCACTTCAGTTGACGAAGTTGGCCTGCATAGGAG
GATCTGAGCTGAGCTGGCGAGGTCCTGCCTCGGAGGCTACCTTGAACTGC
CCGGGCCAGGGCCTAGCCTGAGTTGGCGAGGTCCTGACTCGGAGGCTATC
CGCCCGGGCCGTGGCATATTGTCAACTACTCCGAAGTACTGTAGGAGGGG
GGATTTCGGGCCTGTCGTGCCCGAGACTTGCTGGCCGGCCACTACTGGCG
GCGCTCCTACCCCCCCGACAACGCCTGAGTTGGCGAGGTCCTGACTCCGA
GGCTAGCTGCCCGGGCCGGGGCCTAGTTTTTTTGCCCCGGGCCAGACCAG
CTGGACATCTACGGGCACAGCCCCTGCCCCGGTGAGAGTGCAGCCCTGCC
CCCTGCCCCTCGACACGCGCGCATGGACTGGTAGTTCAGCGCCGCATTGG
CGGGGTCAGCTGGCGCGGCGGCGGCGGCGGCGGCTTGCCTTGTCATACCC
GTGCACGAGTACGTTTAAGTACCTGAAGTACTGTTGCAGTAGCGCTCCTA
CAGAGTGTACACGTGGTTGACGGTGTGCCGGTAGGTGGGCTGGTGGTGAC
CGCGGCGGCTGTGGCGACGGCCAAACTGGAGTGGTACGCACGCACGGCTG
GTCGGCAAGCTGGCCGGGTTTTCTGGTAGGCAGCGGTATATAGGCACGAG
TTCTTCTTGCCTTGCGAGGGAAGGAAGGGCTTCCGTTGAGACCTGTTTTG
GGAGCCTTTTGGCACGGGGCCTGGAGCTCGCCGCTTATCTACCACTCAAA
TAGGCACGAGTTCACGTTGTGCCGCCGTTGGTCCCGAGACCGTTGGCAAC
GCGCCATTGACGGCGGAGCAATAACCTATTGTATCCACTCCTGTACTGTA
GCTAGGCAACATGGGCCCACTGCCGTGAAGCATGCCGCCTGGCGGAGTGG
AGGGTGAGGGGGCGGGCAACTTCAGCGTGGCACGGGGCACTGGGGCTCCG
CTACTTAATATTATCAAGGACAGACACGGGCCCGTGGATTGCCAGGCTGG
GCTCGCCCGACCCGTAAAGTCCGTGGGCCTGGCAGCCTGGCCCGGCCGGC
CCGTGACCGTGGTTGCTGCCCGCGCCCGGAACCGGCCCTGTCCCGTTTTT
GGGGGCCCGAG back to topCoding sequence (CDS) from alignment at S-ischiensis_contig84:542486..550546- >mRNA_S-ischiensis_contig84.20082.1 ID=mRNA_S-ischiensis_contig84.20082.1|Name=mRNA_S-ischiensis_contig84.20082.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1194bp|location=Sequence derived from alignment at S-ischiensis_contig84:542486..550546- (Schizocladia ischiensis KU_0333) ATGAAGATCGTCGGCATCGCCGTGCTCCGGAGTAACCGGGACACGGCGGA ACCGGTGATGCTGTCGCAGGTTAACGAGCTGTCCTCCTTTGGGTTCTTCC AGAGACAAGGATGAAGATCGTCGGCATCGCCGTGCTCCGGAGTAACCGGG ACACGGCGGAACCGGTGATGCTGTCGCAGGTTAACGAGCTGTCCTCCTTT GGGTTCTTCCAGAGACAAGGGATCAAGGAGATGTGCACCTTCTTCAGCAA AACGATCGTCAAGCGGACGCAGCCCGGAATGAGGCAGAGCGTGCAGCACG AAGGATCAAGGAGATGTGCACCTTCTTCAGCAAAACGATCGTCAAGCGGA CGCAGCCCGGAATGAGGCAGAGCGTGCAGCACGAAGATTACAACGTGCAC GTGTACATGCGCCACGATGGGTTGGCGGGGACGGTGACGGCGGATATGGA GTACCCGCCTCGGGTGGCGTTTGTCCTGCTCACACAGATTACAACGTGCA CGTGTACATGCGCCACGATGGGTTGGCGGGGACGGTGACGGCGGATATGG AGTACCCGCCTCGGGTGGCGTTTGTCCTGCTCACACAGCTGCTGGAGCAG TACGGGGAGCAGGTGAAGTGGCAGTCGGAGATCCGGCACGAGGCCATCCG CTTCCCGCCCATGGAGCAGGCCATCATCGACTACCAGGACCCCGCCAAGG CCGACAAGATCACAAAGATACAGCGGGATCTTGACGAGACCACAGACGTG CTGCTGCTGGAGCAGTACGGGGAGCAGGTGAAGTGGCAGTCGGAGATCCG GCACGAGGCCATCCGCTTCCCGCCCATGGAGCAGGCCATCATCGACTACC AGGACCCCGCCAAGGCCGACAAGATCACAAAGATACAGCGGGATCTTGAC GAGACCACAGACGTGCTGCACCGGACGATCGACAGCGTCCTGGAGCGGGG GGTGAAGCTCGACGAGCTGGTGGACCGCTCGGACGACCTCAGCCGCCAGT CCAAGATGTTCTACAAGCAAGCACGGAAGACCAACAGTTGTTGCGTCGTC TCATGACACCGGACGATCGACAGCGTCCTGGAGCGGGGGGTGAAGCTCGA CGAGCTGGTGGACCGCTCGGACGACCTCAGCCGCCAGTCCAAGATGTTCT ACAAGCAAGCACGGAAGACCAACAGTTGTTGCGTCGTCTCATGA back to top
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