mRNA_S-ischiensis_contig83.20035.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig83.20035.1 vs. uniprot
Match: D7G2K4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2K4_ECTSI) HSP 1 Score: 81.3 bits (199), Expect = 1.630e-16 Identity = 52/127 (40.94%), Postives = 69/127 (54.33%), Query Frame = 1
Query: 130 MVELQGELTSKSPLTGQSLGTMAQTQGKRVLVIGKHCLEGKETTLDKPLLVLKKVVVQGSHTDGAEQGPGAAGGQGKESDGEGLAQTHGGAANSAASGRAVEYRIVGKITKKSLFKERPKALVRKIG 510
MVELQGEL SK PL+GQ LG+M GK +LVI H LEGK + KPLLVL+KVVV + + + VEYR+VG++ +K++FK RPK L++K+G
Sbjct: 1 MVELQGELISKDPLSGQPLGSMTSENGKAMLVISNHKLEGKAASEPKPLLVLRKVVVDVNDENCGXXXXXXXXXXXXXXXXXXXXXXX----XXXPPAQRVEYRVVGRVARKTIFKTRPKPLIKKLG 123
BLAST of mRNA_S-ischiensis_contig83.20035.1 vs. uniprot
Match: UPI0018858C4E (chromosome transmission fidelity protein 8 homolog n=1 Tax=Pollicipes pollicipes TaxID=41117 RepID=UPI0018858C4E) HSP 1 Score: 65.1 bits (157), Expect = 2.050e-10 Identity = 47/145 (32.41%), Postives = 68/145 (46.90%), Query Frame = 1
Query: 91 RGASAGPAVP-EWSMVELQGELTSKS--PLTGQSLGTMAQT-QGKRVLVIGKHCLEGKETTLDKPLLVLKK--VVVQGSHTDGAEQGPGAAGGQGKESDGEGLAQTHGGAANSAASGRAVEYRIVGKITKKSLFKERPKALVRKI 507
R + GPA P W+++ELQG+L S+S L GQ +G + T QG VL++G H L GK TL+KPLLV++K + D E A +G Y + + KK LF+ RPK ++ +
Sbjct: 4 RAEAGGPAAPPSWALIELQGDLESRSGSSLAGQLIGDLHFTRQGAPVLIVGHHILWGKVATLEKPLLVMEKGEAATREISVDAMET-------------------------EDAGAGAECRYHVRAVVRKKILFRSRPKPIIANV 123
BLAST of mRNA_S-ischiensis_contig83.20035.1 vs. uniprot
Match: A0A3S1B5I0_ELYCH (Uncharacterized protein n=1 Tax=Elysia chlorotica TaxID=188477 RepID=A0A3S1B5I0_ELYCH) HSP 1 Score: 62.4 bits (150), Expect = 4.540e-9 Identity = 47/129 (36.43%), Postives = 69/129 (53.49%), Query Frame = 1
Query: 121 EWSMVELQGELTSKSP--LTGQSLGTMAQT-QGKRVLVIGKHCLEGKETTLDKPLLVLKKVVVQGSHTDGAEQGPGAAGGQGKESDGEGLAQTHGGAANSAASGRAVEYRIVGKITKKSLFKERPKALV 498
EW++VELQG+L ++ P L+G+ +G + T + VL+IG H L GK TL+KPL VL K Q +T +++DG +H S S ++ Y + ITKK LFK RPK ++
Sbjct: 46 EWAIVELQGDLETRHPVPLSGKFIGDLHFTHKDAPVLIIGHHILHGKVVTLEKPLAVLAKSGEQHENT--------------QDTDG----SSHNLPPKSMDSSHSLSYLVETIITKKILFKTRPKPII 156
BLAST of mRNA_S-ischiensis_contig83.20035.1 vs. uniprot
Match: B7P0M0_IXOSC (Uncharacterized protein (Fragment) n=2 Tax=Ixodes TaxID=6944 RepID=B7P0M0_IXOSC) HSP 1 Score: 60.8 bits (146), Expect = 7.010e-9 Identity = 42/130 (32.31%), Postives = 65/130 (50.00%), Query Frame = 1
Query: 115 VPEWSMVELQGEL-TSKSPLTGQSLGTMAQTQ-GKRVLVIGKHCLEGKETTLDKPLLVLKKVVVQGSHTDGAEQGPGAAGGQGKESDGEGLAQTHGGAANSAASGRAVEYRIVGKITKKSLFKERPKALV 498
+PE+ +VELQG+L T S G+ +G + T+ G VL++G H L GKE ++KP LV++KV+ + A+N + A EY + G +TKK +F+ RPK +V
Sbjct: 14 IPEFRIVELQGDLVTHDSSFLGKYIGDLHYTKAGVPVLLVGHHVLYGKEQKVEKPFLVMRKVMQES-------------------------------ASNGTSKHTAREYHVEGVVTKKLVFRARPKPIV 112
BLAST of mRNA_S-ischiensis_contig83.20035.1 vs. uniprot
Match: A0A6A4W5A3_AMPAM (Chromosome transmission fidelity protein 8 n=1 Tax=Amphibalanus amphitrite TaxID=1232801 RepID=A0A6A4W5A3_AMPAM) HSP 1 Score: 60.5 bits (145), Expect = 1.150e-8 Identity = 33/65 (50.77%), Postives = 44/65 (67.69%), Query Frame = 1
Query: 106 GPAVPEWSMVELQGELTSKSP--LTGQSLGTMAQT-QGKRVLVIGKHCLEGKETTLDKPLLVLKK 291
G P W++VELQG+L S+S L GQ +G + T QG VL++G H L GK T L+KPLLV++K
Sbjct: 11 GTEPPSWALVELQGDLESRSATSLAGQLIGDLHFTRQGAPVLIVGHHILWGKVTALEKPLLVMRK 75
BLAST of mRNA_S-ischiensis_contig83.20035.1 vs. uniprot
Match: A0A0C9SAD0_AMBAM (Uncharacterized protein n=1 Tax=Amblyomma americanum TaxID=6943 RepID=A0A0C9SAD0_AMBAM) HSP 1 Score: 59.7 bits (143), Expect = 1.970e-8 Identity = 47/153 (30.72%), Postives = 71/153 (46.41%), Query Frame = 1
Query: 55 VKVDEDSFADDHRGASAGPAVPEWSMVELQGELT-SKSPLTGQSLGTMAQTQ-GKRVLVIGKHCLEGKETTLDKPLLVLKKVVVQGSHTDGAEQGPGAAGGQGKESDGEGLAQTHGGAANSAASGRAVEYRIVGKITKKSLFKERPKALVRKI 507
VK+ E S +A P++PEW +VELQG+L + L G+ +G + T+ G VL++G H L GKE ++KP LV+ K + G P RA EY + G +T+K +F+ RPK +V +
Sbjct: 6 VKIPETS------SPTARPSIPEWRIVELQGDLMINNEALLGKYIGDLHFTKAGIPVLLVGHHILYGKEQDVEKPFLVIAK-------STGETDPP-----------------------------RAKEYLVRGVVTRKIIFRSRPKPIVSNV 116
BLAST of mRNA_S-ischiensis_contig83.20035.1 vs. uniprot
Match: A0A1S4EL75_DIACI (chromosome transmission fidelity protein 8 homolog n=1 Tax=Diaphorina citri TaxID=121845 RepID=A0A1S4EL75_DIACI) HSP 1 Score: 59.7 bits (143), Expect = 2.200e-8 Identity = 45/132 (34.09%), Postives = 68/132 (51.52%), Query Frame = 1
Query: 115 VPEWSMVELQGELTSKSP--LTGQSLGTM-AQTQGKRVLVIGKHCLEGKETTLDKPLLVLKKVVVQGSHTDGAEQGPGAAGGQGKESDGEGLAQTHGGAAN-SAASGRAVEYRIVGKITKKSLFKERPKALV 498
+PEW +VELQG L S+S + + +G + Q G VL+IG H + GK TLDKPL V++KV+ + D + +A + N + + +VEY I+ I +K +FK RPK +V
Sbjct: 1 MPEWGLVELQGNLESRSNTRMENKFVGDLHIQKNGTPVLIIGHHVIHGKVQTLDKPLAVMQKVL-SNPNVDPST-----------------IASSSKADLNLNRSQSSSVEYEILAVIRRKMIFKARPKPIV 114
BLAST of mRNA_S-ischiensis_contig83.20035.1 vs. uniprot
Match: A0A8D8M5Z0_9HEMI (Chromosome transmission fidelity protein 8 homolog n=3 Tax=Cacopsylla melanoneura TaxID=428564 RepID=A0A8D8M5Z0_9HEMI) HSP 1 Score: 59.7 bits (143), Expect = 2.660e-8 Identity = 45/130 (34.62%), Postives = 65/130 (50.00%), Query Frame = 1
Query: 118 PEWSMVELQGELTSK--SPLTGQSLGTMA-QTQGKRVLVIGKHCLEGKETTLDKPLLVLKKVVVQGSHTDGAEQGPGAAGGQGKESDGEGLAQTHGGAANSAASGRAVEYRIVGKITKKSLFKERPKALV 498
PEW ++ELQG+L S+ S + + +G + Q G +L+IG H L GK L+ PL V+KK+ TD G + L Q N + + VEY I+ IT+K +FK RPK +V
Sbjct: 16 PEWGLIELQGDLESRNGSRMENKFVGDLHFQKNGTPILIIGHHILHGKVQKLETPLAVMKKIDSNSDITDTDLNGI------------DFLDQ------NDSKDTKNVEYEILVVITRKMIFKTRPKPIV 127
BLAST of mRNA_S-ischiensis_contig83.20035.1 vs. uniprot
Match: A0A6P7WK94_IXOSC (uncharacterized protein LOC8023099 isoform X1 n=3 Tax=Ixodes scapularis TaxID=6945 RepID=A0A6P7WK94_IXOSC) HSP 1 Score: 60.8 bits (146), Expect = 9.050e-8 Identity = 42/130 (32.31%), Postives = 65/130 (50.00%), Query Frame = 1
Query: 115 VPEWSMVELQGEL-TSKSPLTGQSLGTMAQTQ-GKRVLVIGKHCLEGKETTLDKPLLVLKKVVVQGSHTDGAEQGPGAAGGQGKESDGEGLAQTHGGAANSAASGRAVEYRIVGKITKKSLFKERPKALV 498
+PE+ +VELQG+L T S G+ +G + T+ G VL++G H L GKE ++KP LV++KV+ + A+N + A EY + G +TKK +F+ RPK +V
Sbjct: 243 IPEFRIVELQGDLVTHDSSFLGKYIGDLHYTKAGVPVLLVGHHVLYGKEQKVEKPFLVMRKVMQES-------------------------------ASNGTSKHTAREYHVEGVVTKKLVFRARPKPIV 341
BLAST of mRNA_S-ischiensis_contig83.20035.1 vs. uniprot
Match: L7M021_RHIPC (Putative microtubule associated complex n=4 Tax=Ixodidae TaxID=6939 RepID=L7M021_RHIPC) HSP 1 Score: 57.8 bits (138), Expect = 1.100e-7 Identity = 45/140 (32.14%), Postives = 67/140 (47.86%), Query Frame = 1
Query: 94 GASAGPAVPEWSMVELQGEL-TSKSPLTGQSLGTMAQTQ-GKRVLVIGKHCLEGKETTLDKPLLVLKKVVVQGSHTDGAEQGPGAAGGQGKESDGEGLAQTHGGAANSAASGRAVEYRIVGKITKKSLFKERPKALVRKI 507
G + ++PEW +VELQG+L T+ GQ +G + T+ G VL++G H L GKE ++KP LV++K + G E GE T EY + G +TKK +F+ RPK +V +
Sbjct: 13 GTTNKSSIPEWRIVELQGDLMTNDEGTAGQYIGDLHYTKAGVPVLLVGHHILYGKEQDVEKPFLVIEK-------SSGEE--------------GETRVTTK-------------EYLVRGVVTKKVIFRSRPKPIVSNV 118 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig83.20035.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig83.20035.1 >prot_S-ischiensis_contig83.20035.1 ID=prot_S-ischiensis_contig83.20035.1|Name=mRNA_S-ischiensis_contig83.20035.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=159bp MIIPVKVDEDSFADDHRGASAGPAVPEWSMVELQGELTSKSPLTGQSLGTback to top mRNA from alignment at S-ischiensis_contig83:624188..625295+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig83.20035.1 ID=mRNA_S-ischiensis_contig83.20035.1|Name=mRNA_S-ischiensis_contig83.20035.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=1108bp|location=Sequence derived from alignment at S-ischiensis_contig83:624188..625295+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig83:624188..625295+ >mRNA_S-ischiensis_contig83.20035.1 ID=mRNA_S-ischiensis_contig83.20035.1|Name=mRNA_S-ischiensis_contig83.20035.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=954bp|location=Sequence derived from alignment at S-ischiensis_contig83:624188..625295+ (Schizocladia ischiensis KU_0333)back to top |