prot_S-ischiensis_contig83.20006.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig83.20006.1
Unique Nameprot_S-ischiensis_contig83.20006.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length162
Homology
BLAST of mRNA_S-ischiensis_contig83.20006.1 vs. uniprot
Match: D7FR40_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FR40_ECTSI)

HSP 1 Score: 98.2 bits (243), Expect = 7.980e-22
Identity = 49/98 (50.00%), Postives = 64/98 (65.31%), Query Frame = 0
Query:   64 PLVPKIDRKKVLRGEDYWVDYRQAASQIKREQEAARRKKGTPRQDQFAQEKLKAEIVQPYKQNWILIAIFFVGALTGYVALDPGVLDSFPLIEIPQDL 161
            PLV K DR+ VLRGEDYW+DYR+    + R++     K   P  DQFAQ K+KAEIV PYKQNWIL     + A+ G+V ++PG+LD   +I  P +L
Sbjct:  191 PLVLKTDRESVLRGEDYWIDYRE----VDRKKAIREAKAKAPAPDQFAQSKMKAEIVNPYKQNWILAISLAIVAIAGFVRINPGILDDPAIITFPNEL 284          
BLAST of mRNA_S-ischiensis_contig83.20006.1 vs. uniprot
Match: A0A835YJZ1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJZ1_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 1.010e-14
Identity = 44/99 (44.44%), Postives = 61/99 (61.62%), Query Frame = 0
Query:   64 PLVPKI-DRKKVLRGEDYWVDYRQAASQIKREQEAARRKKGTPRQDQFAQEKLKAEIVQPYKQNWILIAIFFVGALTGYVALDPGVLDSFPLIEIPQDL 161
            PLV K  +   VL+GEDYW+D     S +  + +     K TP +DQF  EKL+ EIV PYK N IL  I  + A+  +V L+PG+LDS+P+I  P++L
Sbjct:   92 PLVKKERNSMSVLQGEDYWIDL----SLVNEDNDKP--VKPTPTEDQFKDEKLREEIVSPYKNNTILGIILGITAIIAFVQLNPGILDSYPIINFPEEL 184          
BLAST of mRNA_S-ischiensis_contig83.20006.1 vs. uniprot
Match: A0A7S2H532_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2H532_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 3.830e-7
Identity = 34/95 (35.79%), Postives = 54/95 (56.84%), Query Frame = 0
Query:   67 PKIDRKKVLRGEDYWVDYRQAASQIKREQEAARRKKGTPRQDQFAQEKLKAEIVQPYKQNWILIAIFFVGALTGYVALD--PGVLDSFPLIEIPQ 159
            P +   ++  GEDYW+D       ++R++  A RK     + +  +EKL+ E+V PYKQNWI   +F VG +T  V ++  P +L + P+I IP 
Sbjct:   41 PLVRSSRIEAGEDYWIDEEDLKKSLERDEAIANRK---AMEGEIPKEKLRTEVVAPYKQNWI--GLFSVGIVTLAVIINKFPELLQT-PVIPIPD 129          
BLAST of mRNA_S-ischiensis_contig83.20006.1 vs. uniprot
Match: A0A7S4T5L9_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4T5L9_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 7.130e-7
Identity = 38/97 (39.18%), Postives = 53/97 (54.64%), Query Frame = 0
Query:   65 LVPKIDRKKVLRGEDYWVDYRQAASQIKREQEAARRKKGTPRQDQFAQEKLKAEIVQPYKQNWILIAIFFVGALTGYVALD--PGVLDSFPLIEIPQ 159
            L P +    +  GEDYW+D       I+R+Q    RK     + +  QEKL+ E+V PYKQNWI   +F VG +T  V ++  P +L S P+I IP 
Sbjct:  156 LRPIVRANAIEAGEDYWIDEADLKKSIERDQAIQNRK---AMEGEIPQEKLRTEVVAPYKQNWI--GLFSVGIVTLAVIINKFPELLQS-PVIPIPD 246          
BLAST of mRNA_S-ischiensis_contig83.20006.1 vs. uniprot
Match: A0A7S2H545_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2H545_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 1.310e-6
Identity = 34/95 (35.79%), Postives = 54/95 (56.84%), Query Frame = 0
Query:   67 PKIDRKKVLRGEDYWVDYRQAASQIKREQEAARRKKGTPRQDQFAQEKLKAEIVQPYKQNWILIAIFFVGALTGYVALD--PGVLDSFPLIEIPQ 159
            P +   ++  GEDYW+D       ++R++  A RK     + +  +EKL+ E+V PYKQNWI   +F VG +T  V ++  P +L + P+I IP 
Sbjct:  120 PLVRSSRIEAGEDYWIDEEDLKKSLERDEAIANRK---AMEGEIPKEKLRTEVVAPYKQNWI--GLFSVGIVTLAVIINKFPELLQT-PVIPIPD 208          
BLAST of mRNA_S-ischiensis_contig83.20006.1 vs. uniprot
Match: K0S2D5_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S2D5_THAOC)

HSP 1 Score: 50.1 bits (118), Expect = 7.760e-5
Identity = 33/89 (37.08%), Postives = 46/89 (51.69%), Query Frame = 0
Query:   71 RKKVLRGEDYWVDYRQAASQIKREQEAARRKKGTPRQDQFAQEKLKAEIVQPYKQNWILIAIFFVGALTGYVALDPGVLDSFPLIEIPQ 159
            R  V +G DYW+D  +      RE   A+    T ++ + +Q+KLKAEIV PYKQNWI      +  L       P +L + P+I IP 
Sbjct:   45 RDAVEQGLDYWIDEEEINKSKARESRPAK----TSKRSRMSQDKLKAEIVAPYKQNWIGYFSLTIVILATIGKQFPELL-AIPIIPIPD 128          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig83.20006.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7FR40_ECTSI7.980e-2250.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YJZ1_9STRA1.010e-1444.44Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2H532_9STRA3.830e-735.79Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7S4T5L9_9STRA7.130e-739.18Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S2H545_9STRA1.310e-635.79Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
K0S2D5_THAOC7.760e-537.08Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 145..161
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..125
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 126..144
NoneNo IPR availableTMHMMTMhelixcoord: 127..149

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig83contigS-ischiensis_contig83:456616..461558 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig83.20006.1mRNA_S-ischiensis_contig83.20006.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig83 456616..463830 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig83.20006.1 ID=prot_S-ischiensis_contig83.20006.1|Name=mRNA_S-ischiensis_contig83.20006.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=162bp
GQVLGTGGLRARRRTPLSQTRPDVDGPRRKKSKLKKMAKQRVESPEEVWA
ALVGDAKELVESLPLVPKIDRKKVLRGEDYWVDYRQAASQIKREQEAARR
KKGTPRQDQFAQEKLKAEIVQPYKQNWILIAIFFVGALTGYVALDPGVLD
SFPLIEIPQDL*
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