mRNA_S-ischiensis_contig8.19558.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig8.19558.1 vs. uniprot
Match: D8LSF7_ECTSI (C2-C2_1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSF7_ECTSI) HSP 1 Score: 297 bits (761), Expect = 6.640e-89 Identity = 164/257 (63.81%), Postives = 205/257 (79.77%), Query Frame = 1
Query: 1 AKLVQSRFDALEARTQAQADLHEGSVERLQECNRQIRDLRRALQEVQRDKDVAEARAARSDDLEEAAAELRRQNRSLEEQVTRLCESPFVANAFQGMDKADRLAELEQGDRAARLKIEHLQETAQTHHAALVALQKQTVKLREDKERAERALQELRIENKQTEAGAQVLADKMRLYAGDEDVDVEELERALTIVRRRLAHPPTASGRGKEAAGLGFLQTPEGEELDSVPALRRKLQQLQVSNLNITRELERAERMLK 771
A+L+Q+RFD LEART AQADLHEGSV++LQE NRQ+RD+RR LQ+ ++DVA A+ R QVTRLCE+PF++ AF+ ++++R+ ELEQG RAA+LKI+HLQETAQTHHAALV L+KQTV+LREDKERAERALQE+R+ + +TEAGAQ++ADKMRLYAGDED+D+EELERALTIVRR++A P AA GFL+ PE E++D+VPALRRKLQ++QVSNLN+TRELERAERMLK
Sbjct: 264 AQLIQARFDHLEARTLAQADLHEGSVDKLQETNRQLRDVRRELQDALHERDVAVAKCGRXXXXXXXXXXXXXXXXXXXXQVTRLCENPFISQAFRDQERSERVLELEQGSRAAQLKIDHLQETAQTHHAALVTLKKQTVRLREDKERAERALQEMRVRHNETEAGAQLMADKMRLYAGDEDIDLEELERALTIVRRKMADP---------AAFPGFLENPEEEDMDNVPALRRKLQRVQVSNLNLTRELERAERMLK 511
BLAST of mRNA_S-ischiensis_contig8.19558.1 vs. uniprot
Match: A0A836CCF4_9STRA (EF-hand domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCF4_9STRA) HSP 1 Score: 231 bits (588), Expect = 1.440e-65 Identity = 134/236 (56.78%), Postives = 173/236 (73.31%), Query Frame = 1
Query: 4 KLVQSRFDALEARTQAQADLHEGSVERLQECNRQIRDLRRALQEVQRDKDVAEARAARSDDLEEAAAELRRQNRSLEEQVTRLCESPFVANAFQGMDKADRLAELEQGDRAARLKIEHLQETAQTHHAALVALQKQTVKLREDKERAERALQELRIENKQTEAGAQVLADKMRLYAGDEDVDVEELERALTIVRRRLAHPPTASGRGKEAAGLGFLQTPEGEELDSVPALRRKLQQ 711
+L+ +R++ LEAR +AQ LH GSV+RL+E NRQ+RDLRRALQ++ KDVAEARAAR+DD R+LEEQ+T LCESPF+ A+ G +KA RLAELE+ +RA + + EHLQ TAQ H AAL+ALQK+ +LR++KE AE L+E+R + + GAQ LADKMRL+ GDEDVD+EELERALT+VRRR + RG A L FLQ+ +GE++DSVP LRR+LQQ
Sbjct: 286 QLLAARYEHLEARGRAQGTLHAGSVDRLEETNRQMRDLRRALQDMAHQKDVAEARAARADDXXXXXXXXXXXXRALEEQITLLCESPFIGKAYAGAEKAARLAELERAERAWQQRAEHLQATAQEHQAALLALQKKAARLRDEKETAEAQLREVRARHGEARVGAQDLADKMRLFGGDEDVDMEELERALTVVRRR-------ADRG---AALPFLQSADGEDVDSVPVLRRRLQQ 511
BLAST of mRNA_S-ischiensis_contig8.19558.1 vs. uniprot
Match: A0A7S1TSY9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TSY9_9STRA) HSP 1 Score: 183 bits (465), Expect = 3.780e-49 Identity = 114/258 (44.19%), Postives = 163/258 (63.18%), Query Frame = 1
Query: 4 KLVQSRFDALEARTQAQADLHEGSVERLQECNRQIRDLRRALQEVQRDKDVAEARAARSDDLEEAAAELRRQNRSLEEQVTRLCESPFVANAFQGMDKADRLAELEQGDRAARLKIEHLQETAQTHHAALVALQKQTVKLREDKERAERALQELRIENKQTEAGAQVLADKMRLYAG--DEDVDVEELERALTIVRRRLAHPPTASGRGKEAAGLGFLQTPEGEELDSVPALRRKLQQLQVSNLNITRELERAERMLK 771
+L+Q+R+D LEA+ +AQ DLH GS E+++E ++Q+RDLRRALQ+ DK+VAE RA + +L + EL N+ EE++ RLC+SPF++ A++ ++ RL HL+ETAQT+H AL LQK+ L +KE A R L LR++ ++ EAG +L +A +D+D ELE+AL +VRRR +P G+ FL+ EG E D+VP LRR+LQ+LQV NL + RE+ERAERMLK
Sbjct: 46 QLLQTRYDHLEAKVKAQRDLHGGSFEQMEEMSKQVRDLRRALQQAAEDKEVAEERAEGAAELMDRVRELELSNKEREEEIQRLCQSPFISEAYENQERMRRLEAXXXXXXXXXXXXXHLRETAQTYHTALSQLQKKANDLMSEKEAAVRELDALRLKVREGEAGQALLQTVPSSFASLYGDDIDAAELEKALAMVRRRSENP----------TGISFLEQGEGGE-DTVPGLRRRLQELQVRNLELQREVERAERMLK 292
BLAST of mRNA_S-ischiensis_contig8.19558.1 vs. uniprot
Match: A0A7S2S466_9STRA (Hypothetical protein (Fragment) n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2S466_9STRA) HSP 1 Score: 178 bits (451), Expect = 2.650e-48 Identity = 105/255 (41.18%), Postives = 166/255 (65.10%), Query Frame = 1
Query: 7 LVQSRFDALEARTQAQADLHEGSVERLQECNRQIRDLRRALQEVQRDKDVAEARAARSDDLEEAAAELRRQNRSLEEQVTRLCESPFVANAFQGMDKADRLAELEQGDRAARLKIEHLQETAQTHHAALVALQKQTVKLREDKERAERALQELRIENKQTEAGAQVLADKMRLYAGDEDVDVEELERALTIVRRRLAHPPTASGRGKEAAGLGFLQTPEGEELDSVPALRRKLQQLQVSNLNITRELERAERMLK 771
+V++R+D LEA+ +A A++HE +V ++E NR IRDLRR +Q +Q D + R+D+L A R +R LEE++T LCESPF+ +AF+ + D+L LE+ DR +++IEHL+ETA+ HHA ++AL+ + +L + ++ + +L+++ +Q E GA +L DKM+LY+G+ VD +LE+ALTIV+R + +GFL++ E + +P +++KLQQLQV +LN RELE ERMLK
Sbjct: 37 IVKNRYDHLEAKARAAAEIHERTVFMMEEGNRTIRDLRRKVQALQHDNEGLAVHQQRADELALELASTREDSRRLEERMTALCESPFINDAFESRSRVDKLVALERADRQQKVQIEHLKETAKMHHAEILALKSSSEQLCKQRDLLSKENHQLKLKAEQVERGAGLLEDKMKLYSGEAGVDSTQLEKALTIVKRN----------DENMGQVGFLESSTPENV--IPGMKQKLQQLQVLHLNACRELEMTERMLK 279
BLAST of mRNA_S-ischiensis_contig8.19558.1 vs. uniprot
Match: A0A2R5G9Z1_9STRA (Protein fantom n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G9Z1_9STRA) HSP 1 Score: 172 bits (437), Expect = 2.440e-45 Identity = 106/257 (41.25%), Postives = 162/257 (63.04%), Query Frame = 1
Query: 4 KLVQSRFDALEARTQAQADLHEGSVERLQECNRQIRDLRRALQEVQRDKDVAEARAARSDDLEEAAAELRRQNRSLEEQVTRLCESPFVANAFQGMDKADRLAELEQGDRAARLKIEHLQETAQTHHAALVALQKQTVKLREDKERAERALQELRIENKQTEAGAQVLADKMRLYAGDEDVDVEELERALTIVRRRLAHPPTASGRGKEAAG-LGFLQTPEGEELDSVPALRRKLQQLQVSNLNITRELERAERMLK 771
++V++R++ LEA+ +A A++HE +V ++E NR IRDLRR +Q +Q D + R++DL A + + LE ++T LCESPF+ +AF+ K D+L LE+ DR +++IEHL+ETA+ HHA ++AL+ +L + ++ + L+++ +Q E G+ VL DKMRLY+G+ VD ELERALT+V+R G EA +GFL+T PA RKLQ LQ+++L+ R+LE AERMLK
Sbjct: 250 RIVKNRYEHLEAKARAAAEIHERTVHMMEEGNRTIRDLRRKIQALQHDNEQLALHQQRAEDLALELATTKEEAHRLETRITALCESPFINDAFESRSKVDKLLGLERADRQQKVQIEHLKETAKMHHAEILALKSSAEQLCKQRDHLSQENHALKLKLEQVERGSSVLEDKMRLYSGEAGVDASELERALTLVKR-----------GSEAMSQVGFLET--------APASDRKLQDLQMTHLSTCRDLEMAERMLK 487
BLAST of mRNA_S-ischiensis_contig8.19558.1 vs. uniprot
Match: A0A482SAF9_9ARCH (C2-C2_1 domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SAF9_9ARCH) HSP 1 Score: 158 bits (400), Expect = 5.510e-42 Identity = 97/254 (38.19%), Postives = 163/254 (64.17%), Query Frame = 1
Query: 10 VQSRFDALEARTQAQADLHEGSVERLQECNRQIRDLRRALQEVQRDKDVAEARAARSDDLEEAAAELRRQNRSLEEQVTRLCESPFVANAFQGMDKADRLAELEQGDRAARLKIEHLQETAQTHHAALVALQKQTVKLREDKERAERALQELRIENKQTEAGAQVLADKMRLYAGDEDVDVEELERALTIVRRRLAHPPTASGRGKEAAGLGFLQTPEGEELDSVPALRRKLQQLQVSNLNITRELERAERMLK 771
+Q+++D L +++ + S +L++ ++R+LRRAL+E++ +K+V++A+ AR LEE AELR+ NRSLE+++ RLC+SPF+++AF + R EL + +++I H++E H+AL +QK+ +L ++K+ A++ + EL ++ Q E+G L DK+++Y G + VD+E LERALT+V+RR A A R L FL+ PE E+L ++P L+RKL LQ NL +T++ R E +LK
Sbjct: 40 LQTQYDYLVSKSTTHNESSRHSEAQLEDAQLKLRELRRALEELRLEKEVSDAKVARIGSLEELVAELRQANRSLEDKIARLCDSPFISDAFGLHETRLRYEELLKEREDLKMQIGHMKEALTVKHSALTTVQKEAARLLDEKDAADKKVHELMLQLGQFESGNSALNDKLKMYTGSDGVDIESLERALTMVKRRDA----AMER------LPFLEDPENEKLITLPTLKRKLSDLQQLNLRLTQDNARLENLLK 283
BLAST of mRNA_S-ischiensis_contig8.19558.1 vs. uniprot
Match: A0A7S2FNE5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FNE5_9STRA) HSP 1 Score: 114 bits (285), Expect = 1.550e-28 Identity = 63/118 (53.39%), Postives = 83/118 (70.34%), Query Frame = 1
Query: 205 ELRRQNRSLEEQVTRLCESPFVANAFQGMDKADRLAELEQGDRAARLKIEHLQETAQTHHAALVALQKQTVKLREDKERAERALQELRIENKQTEAGAQVLADKMRLYAGDEDVDVEE 558
ELR QN + E+++ LCESPF+++A++ D A RLAE E+ +R RLK+EHLQETAQ HHAALVA++ Q +L+ KE AE E + + +EAG VL DKM LYAGD+ VDV E
Sbjct: 6 ELREQNANYEQKIKTLCESPFISDAYKKQDSAQRLAEYERNERTTRLKLEHLQETAQNHHAALVAMKDQCQELKLAKESAEAERDEYKSQLSTSEAGNNVLKDKMTLYAGDDGVDVHE 123
BLAST of mRNA_S-ischiensis_contig8.19558.1 vs. uniprot
Match: A0A7S3ZSY2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZSY2_9STRA) HSP 1 Score: 111 bits (278), Expect = 3.880e-24 Identity = 91/261 (34.87%), Postives = 143/261 (54.79%), Query Frame = 1
Query: 1 AKLVQSRFDALEARTQAQADLHEGSVERLQECNRQIRDLRRALQEVQRDKDVAEARAARSDDLEEAAAELRRQNRSLEEQVTRLCESPFVANAFQGMDKA-DRLAELEQGDRAARLKIEHLQETAQTHHAALVALQKQTVKLREDKERAERALQELRIENKQTEAGAQVLADKMRLYAGDEDVDVEELERALTIVRRRLAHPPTASGRGKEAAGLGFLQT--PE-GEELDSVPALRRKLQQLQVSNLNITRELERAERMLK 771
A+L++ R+ LE T+AQ D+ + ALQ+ + DKD A R D+L+E EL+ NR LE+++ L + + F G D+ +R+A+LE+ D AR + ++L+++A+ A V LQ+Q LR K+RAE LQ+L++ + + + V DK +L+ G + VD+EELERALTIV++R K FL+ PE G +L ++KL++L+ +L ELERAE+MLK
Sbjct: 219 AQLLEMRYKQLEENTRAQRDVQKAXXXXXXXXXXXXXXXXXALQDSETDKDKLRLDADRVDELQERVTELQTANRRLEDELLNLSDVALNQD-FSGRDREKERVAQLERNDARARAEFDNLRKSAEGTQEAFVQLQQQVDDLRAAKQRAEHELQQLKLRSSTEQVQSTVTEDKAKLFGGLDGVDMEELERALTIVKKR--------EHMKNPDDFDFLEKIDPEIGNDLRQAD-FKKKLEELRERHLQTQYELERAEKMLK 469
BLAST of mRNA_S-ischiensis_contig8.19558.1 vs. uniprot
Match: A0A7S3ZSY1_9STRA (Hypothetical protein (Fragment) n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZSY1_9STRA) HSP 1 Score: 111 bits (278), Expect = 3.890e-24 Identity = 91/261 (34.87%), Postives = 143/261 (54.79%), Query Frame = 1
Query: 1 AKLVQSRFDALEARTQAQADLHEGSVERLQECNRQIRDLRRALQEVQRDKDVAEARAARSDDLEEAAAELRRQNRSLEEQVTRLCESPFVANAFQGMDKA-DRLAELEQGDRAARLKIEHLQETAQTHHAALVALQKQTVKLREDKERAERALQELRIENKQTEAGAQVLADKMRLYAGDEDVDVEELERALTIVRRRLAHPPTASGRGKEAAGLGFLQT--PE-GEELDSVPALRRKLQQLQVSNLNITRELERAERMLK 771
A+L++ R+ LE T+AQ D+ + ALQ+ + DKD A R D+L+E EL+ NR LE+++ L + + F G D+ +R+A+LE+ D AR + ++L+++A+ A V LQ+Q LR K+RAE LQ+L++ + + + V DK +L+ G + VD+EELERALTIV++R K FL+ PE G +L ++KL++L+ +L ELERAE+MLK
Sbjct: 219 AQLLEMRYKQLEENTRAQRDVQKAXXXXXXXXXXXXXXXXXALQDSETDKDKLRLDADRVDELQERVTELQTANRRLEDELLNLSDVALNQD-FSGRDREKERVAQLERNDARARAEFDNLRKSAEGTQEAFVQLQQQVDDLRAAKQRAEHELQQLKLRSSTEQVQSTVTEDKAKLFGGLDGVDMEELERALTIVKKR--------EHMKNPDDFDFLEKIDPEIGNDLRQAD-FKKKLEELRERHLQTQYELERAEKMLK 469
BLAST of mRNA_S-ischiensis_contig8.19558.1 vs. uniprot
Match: A0A7R9UCJ7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UCJ7_9STRA) HSP 1 Score: 83.2 bits (204), Expect = 2.130e-16 Identity = 53/135 (39.26%), Postives = 79/135 (58.52%), Query Frame = 1
Query: 220 NRSLEEQVTRLCESPFVANAFQGMDKADRLAELEQGDRAARLKIEHLQETAQTHHAALVALQKQTVKLREDKERAERALQELRIENKQTEAGAQVL---ADKMRLYAGDEDVDVEELERALTIVRRRLAHPPTAS 615
NR E+++ RLC+SPF++ A++ ++ RL L+I HL+ETAQT+H AL LQ + L +KE A R L LRI+ +++E A++L L GD DV+ ELE+AL ++RRR +P S
Sbjct: 5 NREREDEIQRLCQSPFISEAYENQERMRRLESAXXXXXXXXLQISHLRETAQTYHNALTQLQNKANALMAEKEVAVRELDALRIKIRESETSAELLNAMPSSFSLIYGD-DVNPVELEKALAMIRRRHENPTAMS 138 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig8.19558.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig8.19558.1 >prot_S-ischiensis_contig8.19558.1 ID=prot_S-ischiensis_contig8.19558.1|Name=mRNA_S-ischiensis_contig8.19558.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=257bp AKLVQSRFDALEARTQAQADLHEGSVERLQECNRQIRDLRRALQEVQRDKback to top mRNA from alignment at S-ischiensis_contig8:2192271..2196490+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig8.19558.1 ID=mRNA_S-ischiensis_contig8.19558.1|Name=mRNA_S-ischiensis_contig8.19558.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=4220bp|location=Sequence derived from alignment at S-ischiensis_contig8:2192271..2196490+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig8:2192271..2196490+ >mRNA_S-ischiensis_contig8.19558.1 ID=mRNA_S-ischiensis_contig8.19558.1|Name=mRNA_S-ischiensis_contig8.19558.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1542bp|location=Sequence derived from alignment at S-ischiensis_contig8:2192271..2196490+ (Schizocladia ischiensis KU_0333)back to top |