mRNA_S-ischiensis_contig8.19558.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig8.19558.1
Unique NamemRNA_S-ischiensis_contig8.19558.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
BLAST of mRNA_S-ischiensis_contig8.19558.1 vs. uniprot
Match: D8LSF7_ECTSI (C2-C2_1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSF7_ECTSI)

HSP 1 Score: 297 bits (761), Expect = 6.640e-89
Identity = 164/257 (63.81%), Postives = 205/257 (79.77%), Query Frame = 1
Query:    1 AKLVQSRFDALEARTQAQADLHEGSVERLQECNRQIRDLRRALQEVQRDKDVAEARAARSDDLEEAAAELRRQNRSLEEQVTRLCESPFVANAFQGMDKADRLAELEQGDRAARLKIEHLQETAQTHHAALVALQKQTVKLREDKERAERALQELRIENKQTEAGAQVLADKMRLYAGDEDVDVEELERALTIVRRRLAHPPTASGRGKEAAGLGFLQTPEGEELDSVPALRRKLQQLQVSNLNITRELERAERMLK 771
            A+L+Q+RFD LEART AQADLHEGSV++LQE NRQ+RD+RR LQ+   ++DVA A+  R                    QVTRLCE+PF++ AF+  ++++R+ ELEQG RAA+LKI+HLQETAQTHHAALV L+KQTV+LREDKERAERALQE+R+ + +TEAGAQ++ADKMRLYAGDED+D+EELERALTIVRR++A P         AA  GFL+ PE E++D+VPALRRKLQ++QVSNLN+TRELERAERMLK
Sbjct:  264 AQLIQARFDHLEARTLAQADLHEGSVDKLQETNRQLRDVRRELQDALHERDVAVAKCGRXXXXXXXXXXXXXXXXXXXXQVTRLCENPFISQAFRDQERSERVLELEQGSRAAQLKIDHLQETAQTHHAALVTLKKQTVRLREDKERAERALQEMRVRHNETEAGAQLMADKMRLYAGDEDIDLEELERALTIVRRKMADP---------AAFPGFLENPEEEDMDNVPALRRKLQRVQVSNLNLTRELERAERMLK 511          
BLAST of mRNA_S-ischiensis_contig8.19558.1 vs. uniprot
Match: A0A836CCF4_9STRA (EF-hand domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCF4_9STRA)

HSP 1 Score: 231 bits (588), Expect = 1.440e-65
Identity = 134/236 (56.78%), Postives = 173/236 (73.31%), Query Frame = 1
Query:    4 KLVQSRFDALEARTQAQADLHEGSVERLQECNRQIRDLRRALQEVQRDKDVAEARAARSDDLEEAAAELRRQNRSLEEQVTRLCESPFVANAFQGMDKADRLAELEQGDRAARLKIEHLQETAQTHHAALVALQKQTVKLREDKERAERALQELRIENKQTEAGAQVLADKMRLYAGDEDVDVEELERALTIVRRRLAHPPTASGRGKEAAGLGFLQTPEGEELDSVPALRRKLQQ 711
            +L+ +R++ LEAR +AQ  LH GSV+RL+E NRQ+RDLRRALQ++   KDVAEARAAR+DD            R+LEEQ+T LCESPF+  A+ G +KA RLAELE+ +RA + + EHLQ TAQ H AAL+ALQK+  +LR++KE AE  L+E+R  + +   GAQ LADKMRL+ GDEDVD+EELERALT+VRRR       + RG   A L FLQ+ +GE++DSVP LRR+LQQ
Sbjct:  286 QLLAARYEHLEARGRAQGTLHAGSVDRLEETNRQMRDLRRALQDMAHQKDVAEARAARADDXXXXXXXXXXXXRALEEQITLLCESPFIGKAYAGAEKAARLAELERAERAWQQRAEHLQATAQEHQAALLALQKKAARLRDEKETAEAQLREVRARHGEARVGAQDLADKMRLFGGDEDVDMEELERALTVVRRR-------ADRG---AALPFLQSADGEDVDSVPVLRRRLQQ 511          
BLAST of mRNA_S-ischiensis_contig8.19558.1 vs. uniprot
Match: A0A7S1TSY9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TSY9_9STRA)

HSP 1 Score: 183 bits (465), Expect = 3.780e-49
Identity = 114/258 (44.19%), Postives = 163/258 (63.18%), Query Frame = 1
Query:    4 KLVQSRFDALEARTQAQADLHEGSVERLQECNRQIRDLRRALQEVQRDKDVAEARAARSDDLEEAAAELRRQNRSLEEQVTRLCESPFVANAFQGMDKADRLAELEQGDRAARLKIEHLQETAQTHHAALVALQKQTVKLREDKERAERALQELRIENKQTEAGAQVLADKMRLYAG--DEDVDVEELERALTIVRRRLAHPPTASGRGKEAAGLGFLQTPEGEELDSVPALRRKLQQLQVSNLNITRELERAERMLK 771
            +L+Q+R+D LEA+ +AQ DLH GS E+++E ++Q+RDLRRALQ+   DK+VAE RA  + +L +   EL   N+  EE++ RLC+SPF++ A++  ++  RL               HL+ETAQT+H AL  LQK+   L  +KE A R L  LR++ ++ EAG  +L      +A    +D+D  ELE+AL +VRRR  +P           G+ FL+  EG E D+VP LRR+LQ+LQV NL + RE+ERAERMLK
Sbjct:   46 QLLQTRYDHLEAKVKAQRDLHGGSFEQMEEMSKQVRDLRRALQQAAEDKEVAEERAEGAAELMDRVRELELSNKEREEEIQRLCQSPFISEAYENQERMRRLEAXXXXXXXXXXXXXHLRETAQTYHTALSQLQKKANDLMSEKEAAVRELDALRLKVREGEAGQALLQTVPSSFASLYGDDIDAAELEKALAMVRRRSENP----------TGISFLEQGEGGE-DTVPGLRRRLQELQVRNLELQREVERAERMLK 292          
BLAST of mRNA_S-ischiensis_contig8.19558.1 vs. uniprot
Match: A0A7S2S466_9STRA (Hypothetical protein (Fragment) n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2S466_9STRA)

HSP 1 Score: 178 bits (451), Expect = 2.650e-48
Identity = 105/255 (41.18%), Postives = 166/255 (65.10%), Query Frame = 1
Query:    7 LVQSRFDALEARTQAQADLHEGSVERLQECNRQIRDLRRALQEVQRDKDVAEARAARSDDLEEAAAELRRQNRSLEEQVTRLCESPFVANAFQGMDKADRLAELEQGDRAARLKIEHLQETAQTHHAALVALQKQTVKLREDKERAERALQELRIENKQTEAGAQVLADKMRLYAGDEDVDVEELERALTIVRRRLAHPPTASGRGKEAAGLGFLQTPEGEELDSVPALRRKLQQLQVSNLNITRELERAERMLK 771
            +V++R+D LEA+ +A A++HE +V  ++E NR IRDLRR +Q +Q D +       R+D+L    A  R  +R LEE++T LCESPF+ +AF+   + D+L  LE+ DR  +++IEHL+ETA+ HHA ++AL+  + +L + ++   +   +L+++ +Q E GA +L DKM+LY+G+  VD  +LE+ALTIV+R            +    +GFL++   E +  +P +++KLQQLQV +LN  RELE  ERMLK
Sbjct:   37 IVKNRYDHLEAKARAAAEIHERTVFMMEEGNRTIRDLRRKVQALQHDNEGLAVHQQRADELALELASTREDSRRLEERMTALCESPFINDAFESRSRVDKLVALERADRQQKVQIEHLKETAKMHHAEILALKSSSEQLCKQRDLLSKENHQLKLKAEQVERGAGLLEDKMKLYSGEAGVDSTQLEKALTIVKRN----------DENMGQVGFLESSTPENV--IPGMKQKLQQLQVLHLNACRELEMTERMLK 279          
BLAST of mRNA_S-ischiensis_contig8.19558.1 vs. uniprot
Match: A0A2R5G9Z1_9STRA (Protein fantom n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G9Z1_9STRA)

HSP 1 Score: 172 bits (437), Expect = 2.440e-45
Identity = 106/257 (41.25%), Postives = 162/257 (63.04%), Query Frame = 1
Query:    4 KLVQSRFDALEARTQAQADLHEGSVERLQECNRQIRDLRRALQEVQRDKDVAEARAARSDDLEEAAAELRRQNRSLEEQVTRLCESPFVANAFQGMDKADRLAELEQGDRAARLKIEHLQETAQTHHAALVALQKQTVKLREDKERAERALQELRIENKQTEAGAQVLADKMRLYAGDEDVDVEELERALTIVRRRLAHPPTASGRGKEAAG-LGFLQTPEGEELDSVPALRRKLQQLQVSNLNITRELERAERMLK 771
            ++V++R++ LEA+ +A A++HE +V  ++E NR IRDLRR +Q +Q D +       R++DL    A  + +   LE ++T LCESPF+ +AF+   K D+L  LE+ DR  +++IEHL+ETA+ HHA ++AL+    +L + ++   +    L+++ +Q E G+ VL DKMRLY+G+  VD  ELERALT+V+R           G EA   +GFL+T         PA  RKLQ LQ+++L+  R+LE AERMLK
Sbjct:  250 RIVKNRYEHLEAKARAAAEIHERTVHMMEEGNRTIRDLRRKIQALQHDNEQLALHQQRAEDLALELATTKEEAHRLETRITALCESPFINDAFESRSKVDKLLGLERADRQQKVQIEHLKETAKMHHAEILALKSSAEQLCKQRDHLSQENHALKLKLEQVERGSSVLEDKMRLYSGEAGVDASELERALTLVKR-----------GSEAMSQVGFLET--------APASDRKLQDLQMTHLSTCRDLEMAERMLK 487          
BLAST of mRNA_S-ischiensis_contig8.19558.1 vs. uniprot
Match: A0A482SAF9_9ARCH (C2-C2_1 domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SAF9_9ARCH)

HSP 1 Score: 158 bits (400), Expect = 5.510e-42
Identity = 97/254 (38.19%), Postives = 163/254 (64.17%), Query Frame = 1
Query:   10 VQSRFDALEARTQAQADLHEGSVERLQECNRQIRDLRRALQEVQRDKDVAEARAARSDDLEEAAAELRRQNRSLEEQVTRLCESPFVANAFQGMDKADRLAELEQGDRAARLKIEHLQETAQTHHAALVALQKQTVKLREDKERAERALQELRIENKQTEAGAQVLADKMRLYAGDEDVDVEELERALTIVRRRLAHPPTASGRGKEAAGLGFLQTPEGEELDSVPALRRKLQQLQVSNLNITRELERAERMLK 771
            +Q+++D L +++    +    S  +L++   ++R+LRRAL+E++ +K+V++A+ AR   LEE  AELR+ NRSLE+++ RLC+SPF+++AF   +   R  EL +     +++I H++E     H+AL  +QK+  +L ++K+ A++ + EL ++  Q E+G   L DK+++Y G + VD+E LERALT+V+RR A    A  R      L FL+ PE E+L ++P L+RKL  LQ  NL +T++  R E +LK
Sbjct:   40 LQTQYDYLVSKSTTHNESSRHSEAQLEDAQLKLRELRRALEELRLEKEVSDAKVARIGSLEELVAELRQANRSLEDKIARLCDSPFISDAFGLHETRLRYEELLKEREDLKMQIGHMKEALTVKHSALTTVQKEAARLLDEKDAADKKVHELMLQLGQFESGNSALNDKLKMYTGSDGVDIESLERALTMVKRRDA----AMER------LPFLEDPENEKLITLPTLKRKLSDLQQLNLRLTQDNARLENLLK 283          
BLAST of mRNA_S-ischiensis_contig8.19558.1 vs. uniprot
Match: A0A7S2FNE5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FNE5_9STRA)

HSP 1 Score: 114 bits (285), Expect = 1.550e-28
Identity = 63/118 (53.39%), Postives = 83/118 (70.34%), Query Frame = 1
Query:  205 ELRRQNRSLEEQVTRLCESPFVANAFQGMDKADRLAELEQGDRAARLKIEHLQETAQTHHAALVALQKQTVKLREDKERAERALQELRIENKQTEAGAQVLADKMRLYAGDEDVDVEE 558
            ELR QN + E+++  LCESPF+++A++  D A RLAE E+ +R  RLK+EHLQETAQ HHAALVA++ Q  +L+  KE AE    E + +   +EAG  VL DKM LYAGD+ VDV E
Sbjct:    6 ELREQNANYEQKIKTLCESPFISDAYKKQDSAQRLAEYERNERTTRLKLEHLQETAQNHHAALVAMKDQCQELKLAKESAEAERDEYKSQLSTSEAGNNVLKDKMTLYAGDDGVDVHE 123          
BLAST of mRNA_S-ischiensis_contig8.19558.1 vs. uniprot
Match: A0A7S3ZSY2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZSY2_9STRA)

HSP 1 Score: 111 bits (278), Expect = 3.880e-24
Identity = 91/261 (34.87%), Postives = 143/261 (54.79%), Query Frame = 1
Query:    1 AKLVQSRFDALEARTQAQADLHEGSVERLQECNRQIRDLRRALQEVQRDKDVAEARAARSDDLEEAAAELRRQNRSLEEQVTRLCESPFVANAFQGMDKA-DRLAELEQGDRAARLKIEHLQETAQTHHAALVALQKQTVKLREDKERAERALQELRIENKQTEAGAQVLADKMRLYAGDEDVDVEELERALTIVRRRLAHPPTASGRGKEAAGLGFLQT--PE-GEELDSVPALRRKLQQLQVSNLNITRELERAERMLK 771
            A+L++ R+  LE  T+AQ D+ +                  ALQ+ + DKD     A R D+L+E   EL+  NR LE+++  L +     + F G D+  +R+A+LE+ D  AR + ++L+++A+    A V LQ+Q   LR  K+RAE  LQ+L++ +   +  + V  DK +L+ G + VD+EELERALTIV++R           K      FL+   PE G +L      ++KL++L+  +L    ELERAE+MLK
Sbjct:  219 AQLLEMRYKQLEENTRAQRDVQKAXXXXXXXXXXXXXXXXXALQDSETDKDKLRLDADRVDELQERVTELQTANRRLEDELLNLSDVALNQD-FSGRDREKERVAQLERNDARARAEFDNLRKSAEGTQEAFVQLQQQVDDLRAAKQRAEHELQQLKLRSSTEQVQSTVTEDKAKLFGGLDGVDMEELERALTIVKKR--------EHMKNPDDFDFLEKIDPEIGNDLRQAD-FKKKLEELRERHLQTQYELERAEKMLK 469          
BLAST of mRNA_S-ischiensis_contig8.19558.1 vs. uniprot
Match: A0A7S3ZSY1_9STRA (Hypothetical protein (Fragment) n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZSY1_9STRA)

HSP 1 Score: 111 bits (278), Expect = 3.890e-24
Identity = 91/261 (34.87%), Postives = 143/261 (54.79%), Query Frame = 1
Query:    1 AKLVQSRFDALEARTQAQADLHEGSVERLQECNRQIRDLRRALQEVQRDKDVAEARAARSDDLEEAAAELRRQNRSLEEQVTRLCESPFVANAFQGMDKA-DRLAELEQGDRAARLKIEHLQETAQTHHAALVALQKQTVKLREDKERAERALQELRIENKQTEAGAQVLADKMRLYAGDEDVDVEELERALTIVRRRLAHPPTASGRGKEAAGLGFLQT--PE-GEELDSVPALRRKLQQLQVSNLNITRELERAERMLK 771
            A+L++ R+  LE  T+AQ D+ +                  ALQ+ + DKD     A R D+L+E   EL+  NR LE+++  L +     + F G D+  +R+A+LE+ D  AR + ++L+++A+    A V LQ+Q   LR  K+RAE  LQ+L++ +   +  + V  DK +L+ G + VD+EELERALTIV++R           K      FL+   PE G +L      ++KL++L+  +L    ELERAE+MLK
Sbjct:  219 AQLLEMRYKQLEENTRAQRDVQKAXXXXXXXXXXXXXXXXXALQDSETDKDKLRLDADRVDELQERVTELQTANRRLEDELLNLSDVALNQD-FSGRDREKERVAQLERNDARARAEFDNLRKSAEGTQEAFVQLQQQVDDLRAAKQRAEHELQQLKLRSSTEQVQSTVTEDKAKLFGGLDGVDMEELERALTIVKKR--------EHMKNPDDFDFLEKIDPEIGNDLRQAD-FKKKLEELRERHLQTQYELERAEKMLK 469          
BLAST of mRNA_S-ischiensis_contig8.19558.1 vs. uniprot
Match: A0A7R9UCJ7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UCJ7_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 2.130e-16
Identity = 53/135 (39.26%), Postives = 79/135 (58.52%), Query Frame = 1
Query:  220 NRSLEEQVTRLCESPFVANAFQGMDKADRLAELEQGDRAARLKIEHLQETAQTHHAALVALQKQTVKLREDKERAERALQELRIENKQTEAGAQVL---ADKMRLYAGDEDVDVEELERALTIVRRRLAHPPTAS 615
            NR  E+++ RLC+SPF++ A++  ++  RL           L+I HL+ETAQT+H AL  LQ +   L  +KE A R L  LRI+ +++E  A++L        L  GD DV+  ELE+AL ++RRR  +P   S
Sbjct:    5 NREREDEIQRLCQSPFISEAYENQERMRRLESAXXXXXXXXLQISHLRETAQTYHNALTQLQNKANALMAEKEVAVRELDALRIKIRESETSAELLNAMPSSFSLIYGD-DVNPVELEKALAMIRRRHENPTAMS 138          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig8.19558.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
D8LSF7_ECTSI6.640e-8963.81C2-C2_1 domain-containing protein n=1 Tax=Ectocarp... [more]
A0A836CCF4_9STRA1.440e-6556.78EF-hand domain-containing protein n=1 Tax=Tribonem... [more]
A0A7S1TSY9_9STRA3.780e-4944.19Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A7S2S466_9STRA2.650e-4841.18Hypothetical protein (Fragment) n=1 Tax=labyrinthu... [more]
A0A2R5G9Z1_9STRA2.440e-4541.25Protein fantom n=1 Tax=Hondaea fermentalgiana TaxI... [more]
A0A482SAF9_9ARCH5.510e-4238.19C2-C2_1 domain-containing protein n=1 Tax=archaeon... [more]
A0A7S2FNE5_9STRA1.550e-2853.39Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A7S3ZSY2_9STRA3.880e-2434.87Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S3ZSY1_9STRA3.890e-2434.87Hypothetical protein (Fragment) n=3 Tax=Pelagomona... [more]
A0A7R9UCJ7_9STRA2.130e-1639.26Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig8contigS-ischiensis_contig8:2192271..2196490 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score298.1
Seed ortholog evalue3.9e-78
Seed eggNOG ortholog2880.D8LSF7
Preferred nameRPGRIP1L
KEGG koko:K16512,ko:K16550
GOsGO:0001654,GO:0001655,GO:0001664,GO:0001701,GO:0001736,GO:0001738,GO:0001754,GO:0001822,GO:0001889,GO:0002009,GO:0003002,GO:0003008,GO:0003674,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005813,GO:0005815,GO:0005829,GO:0005856,GO:0005874,GO:0005879,GO:0005881,GO:0005886,GO:0005911,GO:0005929,GO:0005930,GO:0006935,GO:0006996,GO:0007163,GO:0007164,GO:0007275,GO:0007368,GO:0007389,GO:0007399,GO:0007417,GO:0007420,GO:0007423,GO:0007507,GO:0007600,GO:0007601,GO:0008104,GO:0008150,GO:0008277,GO:0008283,GO:0008589,GO:0009605,GO:0009653,GO:0009790,GO:0009792,GO:0009799,GO:0009855,GO:0009887,GO:0009888,GO:0009966,GO:0009968,GO:0009987,GO:0010646,GO:0010648,GO:0015630,GO:0016020,GO:0016043,GO:0021532,GO:0021537,GO:0021549,GO:0021591,GO:0021670,GO:0021772,GO:0021915,GO:0021988,GO:0022008,GO:0022037,GO:0022038,GO:0022406,GO:0022607,GO:0022615,GO:0023051,GO:0023057,GO:0030030,GO:0030031,GO:0030054,GO:0030154,GO:0030182,GO:0030326,GO:0030900,GO:0030902,GO:0031862,GO:0031870,GO:0031974,GO:0031981,GO:0032391,GO:0032501,GO:0032502,GO:0032838,GO:0033036,GO:0033365,GO:0034613,GO:0035107,GO:0035108,GO:0035113,GO:0035115,GO:0035116,GO:0035136,GO:0035137,GO:0035253,GO:0035295,GO:0035869,GO:0036064,GO:0040011,GO:0042221,GO:0042330,GO:0042461,GO:0042462,GO:0042995,GO:0043005,GO:0043009,GO:0043010,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043583,GO:0043584,GO:0044085,GO:0044422,GO:0044424,GO:0044428,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044447,GO:0044463,GO:0044464,GO:0044782,GO:0045744,GO:0046530,GO:0048468,GO:0048513,GO:0048519,GO:0048523,GO:0048583,GO:0048585,GO:0048592,GO:0048598,GO:0048666,GO:0048699,GO:0048729,GO:0048731,GO:0048732,GO:0048736,GO:0048839,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050877,GO:0050896,GO:0050953,GO:0051179,GO:0051640,GO:0051641,GO:0060039,GO:0060041,GO:0060173,GO:0060271,GO:0060322,GO:0060429,GO:0060541,GO:0061008,GO:0061351,GO:0061512,GO:0065007,GO:0070013,GO:0070727,GO:0070925,GO:0071840,GO:0071944,GO:0072001,GO:0072359,GO:0072657,GO:0090102,GO:0090596,GO:0097014,GO:0097458,GO:0097499,GO:0097500,GO:0097711,GO:0097730,GO:0097731,GO:0097733,GO:0099080,GO:0099081,GO:0099512,GO:0099513,GO:0099568,GO:0120025,GO:0120031,GO:0120036,GO:0120038,GO:0140056,GO:1903441,GO:1904491,GO:1905515,GO:1990778
EggNOG free text desc.thromboxane A2 receptor binding
EggNOG OGs2CMYB@1,2QSQG@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01009,ko03036
Hectar predicted targeting categoryother localisation
Exons6
Model size772
Cds size771
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig8.19558.1prot_S-ischiensis_contig8.19558.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig8 2192271..2196490 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817288.8722072-CDS-S-ischiensis_contig8:2192270..21923751622817288.8722072-CDS-S-ischiensis_contig8:2192270..2192375Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 2192271..2192375 +
1695740998.707099-CDS-S-ischiensis_contig8:2192270..21923751695740998.707099-CDS-S-ischiensis_contig8:2192270..2192375Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 2192271..2192375 +
1622817288.8840673-CDS-S-ischiensis_contig8:2192912..21930471622817288.8840673-CDS-S-ischiensis_contig8:2192912..2193047Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 2192913..2193047 +
1695740998.722937-CDS-S-ischiensis_contig8:2192912..21930471695740998.722937-CDS-S-ischiensis_contig8:2192912..2193047Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 2192913..2193047 +
1622817288.8949404-CDS-S-ischiensis_contig8:2193446..21935691622817288.8949404-CDS-S-ischiensis_contig8:2193446..2193569Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 2193447..2193569 +
1695740998.7321587-CDS-S-ischiensis_contig8:2193446..21935691695740998.7321587-CDS-S-ischiensis_contig8:2193446..2193569Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 2193447..2193569 +
1622817288.9057977-CDS-S-ischiensis_contig8:2194584..21947221622817288.9057977-CDS-S-ischiensis_contig8:2194584..2194722Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 2194585..2194722 +
1695740998.743217-CDS-S-ischiensis_contig8:2194584..21947221695740998.743217-CDS-S-ischiensis_contig8:2194584..2194722Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 2194585..2194722 +
1622817288.9163349-CDS-S-ischiensis_contig8:2195288..21954501622817288.9163349-CDS-S-ischiensis_contig8:2195288..2195450Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 2195289..2195450 +
1695740998.7514484-CDS-S-ischiensis_contig8:2195288..21954501695740998.7514484-CDS-S-ischiensis_contig8:2195288..2195450Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 2195289..2195450 +
1622817288.9302511-CDS-S-ischiensis_contig8:2196382..21964901622817288.9302511-CDS-S-ischiensis_contig8:2196382..2196490Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 2196383..2196490 +
1695740998.7619143-CDS-S-ischiensis_contig8:2196382..21964901695740998.7619143-CDS-S-ischiensis_contig8:2196382..2196490Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 2196383..2196490 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig8.19558.1

>prot_S-ischiensis_contig8.19558.1 ID=prot_S-ischiensis_contig8.19558.1|Name=mRNA_S-ischiensis_contig8.19558.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=257bp
AKLVQSRFDALEARTQAQADLHEGSVERLQECNRQIRDLRRALQEVQRDK
DVAEARAARSDDLEEAAAELRRQNRSLEEQVTRLCESPFVANAFQGMDKA
DRLAELEQGDRAARLKIEHLQETAQTHHAALVALQKQTVKLREDKERAER
ALQELRIENKQTEAGAQVLADKMRLYAGDEDVDVEELERALTIVRRRLAH
PPTASGRGKEAAGLGFLQTPEGEELDSVPALRRKLQQLQVSNLNITRELE
RAERMLK
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mRNA from alignment at S-ischiensis_contig8:2192271..2196490+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig8.19558.1 ID=mRNA_S-ischiensis_contig8.19558.1|Name=mRNA_S-ischiensis_contig8.19558.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=4220bp|location=Sequence derived from alignment at S-ischiensis_contig8:2192271..2196490+ (Schizocladia ischiensis KU_0333)
GCGAAGCTGGTGCAGTCTCGCTTCGACGCGCTGGAGGCGCGCACGCAGGC GCAGGCGGACCTGCACGAGGGCAGCGTGGAGAGGCTGCAGGAGTGCAACC GACAGGTGAGCCTAGGCTAGTAGTATATCATCACTTCACTTCACTTCACT TGCGACATGCCGCGTCAACATCCCGTCGTTTGTTGTTGTCTACAGCACGT CCGGAAGTACCCTACCAGTTTCTGAAGTGCTACAGCAAGATAGAAAAGTA GAGAATACATCTCGTCATTTGTTCTCTACTCGAGTACAGCACTATCCTAG TATACCAGTTTCTGAAGTGCTGCAGTGCGATAGCAAAGTAGAGGAGTGCC TATACTAGTACGTACTGTAGTACGAGTACTTGGAAGACCTTGGCCCTTCT GCCCCAGGTGTACTCGAGTACACGGAACTATCCTACGAAGTACAATACAT GTATCGCCGCCTCCACTGCCAGCACCACCACCTTACCTTCGCTGGTGATG CCACCCACCACCACCACAACCATCACCACCACCACCACCACCACCACCGC CACCACCGCCACCACCACCACCACCACCACCACAGCCGACAACCTCCAAT ACGACACCCCCGCCCGTTTTCCTCCTTCCCCCGCGCTGGCAGATCCGGGA CCTGCGGCGGGCGCTGCAGGAGGTGCAAAGGGACAAGGACGTGGCCGAGG CACGCGCGGCCCGTTCGGACGACCTGGAGGAGGCCGCGGCGGAGCTGAGG AGGCAGAACCGCTCGCTCGAGGAGCAGGTGCGTCGGTTCGGTCCGGGGGG GTGGTGGAGGGTTTGCAGCTGCGCGCATTATTTGTCTTCGAGCCGATGCA ACCATGGCGGCAGAAATACGTCTGTCGGTCGATGGTCGACGTACCATGTA CAGTACCTGTAGGCACAAACCCGCCCGATGATCCTGTGCTGATTTGTGCC GGAGATGGAATATCCAAGCAGATCAACCTATTTATCGACAGTTCTGATCT ACATATCTATCGACTATCGATAGTCGATATTCGGTAGTTTGACCTGCACT AAATCCAAGCACGAAGTAGTTAGTAACGCCACCCACACAATCAGTCGAGC CCGATGGCTATCTGCTGATTGATATCCCATCACTGCCGCCAACCTGACCG TGTTGTGCTCTGCTCGCCCCCCCCAGGTGACCCGTCTGTGCGAGAGCCCC TTCGTGGCCAACGCCTTCCAGGGCATGGACAAGGCAGACAGACTCGCCGA GCTGGAGCAGGGGGACCGGGCCGCACGCCTCAAGATAGAGCACCTGCAGG TGGGGCGCAGAGCAGTTGGTGGAATATCTATCAGTACATAGTTATCGGGC TCGAGTGATTTTGTGGGTGGCGCTACTAACTAGAGTACTTCAAAGTATTT GGAATTAGTGCGGGTCCAACTATTGAATATCGACAACCGATAGATATATG GATCAGTACTGTCGATAAATAGGTTGATTTTGCTTGGATATTCCATCACT GGCGCTGAGAGGGGGGCAACGGGACGGGAGTGGATGAGATGGGATGGGAT GGGATGGGGGCAGTCGGGGTCACCCCTACCGTAAGTTGACGTGTGATGTG ATGTGATGTGATGTGTACTCTAATGTACTGTAGTTTGATATCACATCACA CCACATCGCATCACATCACACCTACAGTAAGATGTGATGGTAGGGTTGGA TTTGGGTTGTAACCCTTTTACCCCTGGGGTCCGTATACCATAGGGTTTTA GTGTGTAAGTCCAATTTAGCAGGGTATAAAAGGGTTAAGGTTGGGGCGCC TGAGGATGAGGTGCTTGCGGGGGTGGGATAGTGAGGGAGGGGAGGGGACA GGACGGGAGTGTGAGCCGGGGGTAGGGAGTGGCGCTCGGGGTCTAGCTGG GCGACATGCTCTTAGTTTAGCTTGCTTTGAACTAAGCACGTACGAGTACG AGTACGAGTACTGTGTACATAGTACTTGGTTTGAAGGAGGAAGAATTGCG GCAGAAAGCACACGCTACTGTAGGTACGTAGCAAGTACAGGTGCAATAGC TCTTGCGTACCTATTGTACATGGTACACGCTGTACTTTGAAGCACATGGT GAGTAGAGGTCTGCACGGCATGTGCCGCGCGCAATTGTCCTGCAAACGCG TCTGCGACTGCGCAAGAAGATGCTGAGGCGAAGAAGAGCACTCGCACTTA TTCCGTGGCTTTGCAACGGCTGGATCGGATCCTACTTCGTGGTATACTCT ATAAGTGCGCACGTACTTACGCCCGGCGAAAACCCTCCGCTGGCCGGCCG ACCATGGCGAGCAGGAGACGGCCCAGACGCATCATGCGGCGCTGGTGGCG CTCCAGAAGCAGACGGTGAAGCTGCGGGAGGACAAGGAGAGGGCCGAGCG GGCTCTGCAGGAGCTAAGGATCGAGAACAAGCAGACCGAGGCCGGTGCCC AGGCAAGCGAAACAACAACAACGACTGGAATGATGAACAGAAAGACGAAC GCCAGTGCCCCCCCCCCCCCTCCCCATGCCCGCTGTACGAGAGAGAGAGA GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGCTGCCGT GCATGTGGTGCGATAGGTTAGAGGGAGTAGAGTACTCAGATTTTGAAGCT TTTTAGTCGACTGGATCTCGCTGTGTCAGGTGGCGGCATTGCTTAGTATT CCACGTATACACTGTACAGTACAGCCCGGTACAGCGCAGTACAGTACAGC ACAGTACAGCACAGTACAGTACAGTACAGCACAGCACAGCACAGTACAGT ACAACACAGTGTAACACAGCACAGCACAGTACAGTACAGCAAAGCACAGC ACAGCATAGCATAGCACAGTACGGCACAGTCCAGTCCAGTCCAGTACAGT ACAGCACAGCGCAGCACAGCACAGTACACAATTCCGAGTCGTCCCGGGCC CGGCCCGGGGGCCAAAACGACTACCTAGGGAGACTCAGCAGCGCCCTCCC GCCCACCCGCCTGCACAGGTACTCGCGGACAAGATGCGGCTGTACGCGGG GGATGAGGACGTGGACGTGGAGGAGCTGGAGCGGGCACTCACCATCGTCC GCAGGCGGCTGGCCCACCCGCCCACGGCGTCCGGGCGGGGGAAAGAGGCT GCTGGGCTGGGCTTCCTCCAGACCCCGGAGGTAGGTAACTTACTGTCGGC GTGGGTGCCAGCCAGTGATGGAATCGATCAGTAGATAGCTATCGGGCTCG ACTGATTTTGTGGGTGGGGTTGCTTACTACTTGGCCTCTTCTCCCCTTCC CCGCACAAATTTCCAGTGGCGAGCTAAGGAGGGCCACTGCTGAGGTCTCT AGTGACGTGGCCCGCACCTCGCCCCGTGTTGTTCCTGATAGTACTTGGAT TTGGTGTGGGTTAAACTATCGAATATTGCCTATCGATAGATAACTCGCCG CTTATCTACCACTCAAAATAGATCAGTACTGTGATAAATAGGTTGATTGC CTCTAGCTGTTCCATCACTGGTGGTGGCCTGCTCGGTTCGTTGGTGCTCG CTGGGGAGGGTGACGGTGTTGGAAGGTTTCTCGCGGGAAGACAGACAAGC AAGTGGACAGGGACGAGGGTTAGGAGGTGTATTGTACTGTACTTTGCTGT GCTGTGGTGTGCTGTGCTGTGATGTGCTGTGCTGTGCTGTACTGTGCTGT GCTGTACTGTGCTATGCTGTACTGTGTTCTGCTGTACTATGCTGTACTGT GCTGTGCTGTACGGTGTGGTGCTGTGCTGTGCTGTGCTGTGCTGTGCTGC GTTGTGCTGTACTGTGCGGTGCTGTGCTGTGCTGTACTGTGCTGTGCTGT GCTGTGCTGTGCTGTGCTGTACTGTGCTGTACTGTGCTGTGCTGTACTGT ACCGTACTGTGCTGTGCTGTGCTGTGCTGTACTGCGCTGTACTGTACTGT ACTGTAGTGCATTGCACTGTACTGTAGATTACGTGCTCGCGCGAGTTCGG GGGCCCCGAACTCATGCCAAGACCCCCCTCCTGCTGACCCGCCCACCCGC CCTCGCTCCCTCCCTCCCTCCCTCCCTccCCCCCCTCGCCCTCTCTCCTC TCCCCCCTCCAGGGCGAAGAGCTGGATAGCGTCCCGGCCCTGCGTCGCAA GCTGCAGCAGCTGCAGGTGTCCAACCTTAACATCACCAGGGAGCTCGAGC GCGCCGAGCGAATGCTCAAG
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Coding sequence (CDS) from alignment at S-ischiensis_contig8:2192271..2196490+

>mRNA_S-ischiensis_contig8.19558.1 ID=mRNA_S-ischiensis_contig8.19558.1|Name=mRNA_S-ischiensis_contig8.19558.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1542bp|location=Sequence derived from alignment at S-ischiensis_contig8:2192271..2196490+ (Schizocladia ischiensis KU_0333)
GCGAAGCTGGTGCAGTCTCGCTTCGACGCGCTGGAGGCGCGCACGCAGGC
GCAGGCGGACCTGCACGAGGGCAGCGTGGAGAGGCTGCAGGAGTGCAACC
GACAGGCGAAGCTGGTGCAGTCTCGCTTCGACGCGCTGGAGGCGCGCACG
CAGGCGCAGGCGGACCTGCACGAGGGCAGCGTGGAGAGGCTGCAGGAGTG
CAACCGACAGATCCGGGACCTGCGGCGGGCGCTGCAGGAGGTGCAAAGGG
ACAAGGACGTGGCCGAGGCACGCGCGGCCCGTTCGGACGACCTGGAGGAG
GCCGCGGCGGAGCTGAGGAGGCAGAACCGCTCGCTCGAGGAGCAGATCCG
GGACCTGCGGCGGGCGCTGCAGGAGGTGCAAAGGGACAAGGACGTGGCCG
AGGCACGCGCGGCCCGTTCGGACGACCTGGAGGAGGCCGCGGCGGAGCTG
AGGAGGCAGAACCGCTCGCTCGAGGAGCAGGTGACCCGTCTGTGCGAGAG
CCCCTTCGTGGCCAACGCCTTCCAGGGCATGGACAAGGCAGACAGACTCG
CCGAGCTGGAGCAGGGGGACCGGGCCGCACGCCTCAAGATAGAGCACCTG
CAGGTGACCCGTCTGTGCGAGAGCCCCTTCGTGGCCAACGCCTTCCAGGG
CATGGACAAGGCAGACAGACTCGCCGAGCTGGAGCAGGGGGACCGGGCCG
CACGCCTCAAGATAGAGCACCTGCAGGAGACGGCCCAGACGCATCATGCG
GCGCTGGTGGCGCTCCAGAAGCAGACGGTGAAGCTGCGGGAGGACAAGGA
GAGGGCCGAGCGGGCTCTGCAGGAGCTAAGGATCGAGAACAAGCAGACCG
AGGCCGGTGCCCAGGAGACGGCCCAGACGCATCATGCGGCGCTGGTGGCG
CTCCAGAAGCAGACGGTGAAGCTGCGGGAGGACAAGGAGAGGGCCGAGCG
GGCTCTGCAGGAGCTAAGGATCGAGAACAAGCAGACCGAGGCCGGTGCCC
AGGTACTCGCGGACAAGATGCGGCTGTACGCGGGGGATGAGGACGTGGAC
GTGGAGGAGCTGGAGCGGGCACTCACCATCGTCCGCAGGCGGCTGGCCCA
CCCGCCCACGGCGTCCGGGCGGGGGAAAGAGGCTGCTGGGCTGGGCTTCC
TCCAGACCCCGGAGGTACTCGCGGACAAGATGCGGCTGTACGCGGGGGAT
GAGGACGTGGACGTGGAGGAGCTGGAGCGGGCACTCACCATCGTCCGCAG
GCGGCTGGCCCACCCGCCCACGGCGTCCGGGCGGGGGAAAGAGGCTGCTG
GGCTGGGCTTCCTCCAGACCCCGGAGGGCGAAGAGCTGGATAGCGTCCCG
GCCCTGCGTCGCAAGCTGCAGCAGCTGCAGGTGTCCAACCTTAACATCAC
CAGGGAGCTCGAGCGCGCCGAGCGAATGCTCAAGGGCGAAGAGCTGGATA
GCGTCCCGGCCCTGCGTCGCAAGCTGCAGCAGCTGCAGGTGTCCAACCTT
AACATCACCAGGGAGCTCGAGCGCGCCGAGCGAATGCTCAAG
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