prot_S-ischiensis_contig8.19292.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig8.19292.1
Unique Nameprot_S-ischiensis_contig8.19292.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length139
Homology
BLAST of mRNA_S-ischiensis_contig8.19292.1 vs. uniprot
Match: D7G3D3_ECTSI (E3 ubiquitin-protein ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3D3_ECTSI)

HSP 1 Score: 162 bits (411), Expect = 9.440e-44
Identity = 76/135 (56.30%), Postives = 92/135 (68.15%), Query Frame = 0
Query:    6 LLARDGRVLWTKGDASFPQPPEVVREICGDGGTADLRRLQELVSVVLREAPKESLASWCNWLLGGGGDPARVLGSLKD-ANVRRVCGYVFKRGDIAWNCRTCQMDSTCVLCDGCFRRSNHRGHEVYFHRTAPGGC 139
            L+ RDG+ +W +   + P P  +VREI    G  DL  L++ V VVL  A   SL +WC+WL   G +P   L SL++ +   RVCGYVFKRGDIAWNCR CQ+DSTCV CD CFRRS+H GH VYFHRTAPGGC
Sbjct:    7 LVGRDGKTIWDRKSNALPDPGALVREIRSPDGVTDLTLLRQCVMVVLAHAHPSSLPTWCSWLCCLG-EPETTLRSLREMSGGSRVCGYVFKRGDIAWNCRKCQVDSTCVQCDACFRRSDHTGHPVYFHRTAPGGC 140          
BLAST of mRNA_S-ischiensis_contig8.19292.1 vs. uniprot
Match: A0A7S3XNE3_HETAK (E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XNE3_HETAK)

HSP 1 Score: 122 bits (305), Expect = 9.170e-33
Identity = 63/135 (46.67%), Postives = 78/135 (57.78%), Query Frame = 0
Query:   11 GRVLWTKGDASFPQPPEVVREICGDGGTADLRRLQELVSVVLREAPKESLASWCNWLLGG------GGDPARVLGSLKDANVRRVCGYVFKRGDIAWNCRTCQMDSTCVLCDGCFRRSNHRGHEVYFHRTAPGGC 139
            GR+L+     S P+P  +   + G  G  D + L      VL       + S+ +WLL          DPAR+ G L +AN  RVCGYVF+RGDIAWNCR CQ D TCV CD C+R ++HRGH V FHRT PGGC
Sbjct:   12 GRLLFEGLPDSLPEPRGLAALVAGVPGP-DTQLLLSAARAVLNHCDPPQIDSYLSWLLVARWGDEEAPDPARLRG-LANANAARVCGYVFQRGDIAWNCRDCQKDPTCVQCDACYRAADHRGHAVTFHRTGPGGC 144          
BLAST of mRNA_S-ischiensis_contig8.19292.1 vs. uniprot
Match: A0A4D9D1X7_9STRA (E3 ubiquitin-protein ligase n=6 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D1X7_9STRA)

HSP 1 Score: 124 bits (312), Expect = 2.190e-30
Identity = 66/158 (41.77%), Postives = 81/158 (51.27%), Query Frame = 0
Query:    2 PRARLLARDGRVLWTKGDA----SFPQPPEVVREICGDGGTADLRRLQELVSVVLREAPKESLASWCNWLL-------------GGGGDPARVLGSLKDANV---RRVCGYVFKRGDIAWNCRTCQMDSTCVLCDGCFRRSNHRGHEVYFHRTAPGGC 139
            PR R+   DG V+++  D     S+P P EVV  I           L+E    V R  P + LA W +  L             G G       G LK  ++   R VCGY FKRGD+ WNCR+CQ D TCV CD CFR S+H GHEVYFH+ +PGGC
Sbjct:   23 PRLRITKTDGTVIYSNEDEGVIRSYPSPSEVVSAIAHADDPHTCALLRECARQVFRRGPVDKLADWGDHFLCVEVGPRKDAELTGSGSGREIDTGRLKSLHLTAQRGVCGYTFKRGDLCWNCRSCQTDPTCVQCDPCFRASDHAGHEVYFHQASPGGC 180          
BLAST of mRNA_S-ischiensis_contig8.19292.1 vs. uniprot
Match: A0A7S4EF35_9STRA (E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EF35_9STRA)

HSP 1 Score: 112 bits (281), Expect = 6.420e-29
Identity = 46/57 (80.70%), Postives = 48/57 (84.21%), Query Frame = 0
Query:   83 DANVRRVCGYVFKRGDIAWNCRTCQMDSTCVLCDGCFRRSNHRGHEVYFHRTAPGGC 139
            D   RR CGYVFKRGDIAWNCRTCQ DSTCV+CD CFR S+H GHEVYFHRT PGGC
Sbjct:   22 DRRPRRPCGYVFKRGDIAWNCRTCQTDSTCVICDTCFRSSDHEGHEVYFHRTTPGGC 78          
BLAST of mRNA_S-ischiensis_contig8.19292.1 vs. uniprot
Match: A0A7S3P848_9STRA (E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P848_9STRA)

HSP 1 Score: 110 bits (276), Expect = 3.550e-28
Identity = 44/53 (83.02%), Postives = 48/53 (90.57%), Query Frame = 0
Query:   87 RRVCGYVFKRGDIAWNCRTCQMDSTCVLCDGCFRRSNHRGHEVYFHRTAPGGC 139
            RR CGYVF+RGDIAWNCRTCQ D TCV+CD CFRRS+H+GHEVYFHRT PGGC
Sbjct:   50 RRPCGYVFQRGDIAWNCRTCQTDPTCVICDDCFRRSDHQGHEVYFHRTTPGGC 102          
BLAST of mRNA_S-ischiensis_contig8.19292.1 vs. uniprot
Match: A0A7S2SCK7_9STRA (E3 ubiquitin-protein ligase (Fragment) n=2 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2SCK7_9STRA)

HSP 1 Score: 112 bits (279), Expect = 2.730e-27
Identity = 56/105 (53.33%), Postives = 65/105 (61.90%), Query Frame = 0
Query:   44 LQELVSVVLREAPKESLASWCNWLLGGGGDPAR-----VLGSLKD----ANVRRVCGYVFKRGDIAWNCRTCQMDSTCVLCDGCFRRSNHRGHEVYFHRTAPGGC 139
            L E V   L   P E +  W + L+   G+        V+  LK         + CGYVFKRGDIAWNCRTCQ DSTCVLCD CFR SNH+GHEV+FHRT+PGGC
Sbjct:   80 LTEAVFGSLTGVPPEQVRKWADALVLAYGEEESSASDSVVTWLKTLPHITKSHQPCGYVFKRGDIAWNCRTCQADSTCVLCDECFRNSNHKGHEVFFHRTSPGGC 184          
BLAST of mRNA_S-ischiensis_contig8.19292.1 vs. uniprot
Match: A0A7S4V6U6_9STRA (E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4V6U6_9STRA)

HSP 1 Score: 106 bits (264), Expect = 9.510e-27
Identity = 42/52 (80.77%), Postives = 46/52 (88.46%), Query Frame = 0
Query:   88 RVCGYVFKRGDIAWNCRTCQMDSTCVLCDGCFRRSNHRGHEVYFHRTAPGGC 139
            R CGYVF+RGDIAWNCRTCQ DSTCVLCD CF  S+H GHEV+FHRT+PGGC
Sbjct:   44 RPCGYVFRRGDIAWNCRTCQTDSTCVLCDRCFHESDHEGHEVFFHRTSPGGC 95          
BLAST of mRNA_S-ischiensis_contig8.19292.1 vs. uniprot
Match: A0A7S3ZP19_9STRA (E3 ubiquitin-protein ligase n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZP19_9STRA)

HSP 1 Score: 113 bits (283), Expect = 1.750e-26
Identity = 52/89 (58.43%), Postives = 60/89 (67.42%), Query Frame = 0
Query:   55 APKESLASWCNWLL----GGGGDPARVLGSLKDANVRRVCGYVFKRGDIAWNCRTCQMDSTCVLCDGCFRRSNHRGHEVYFHRTAPGGC 139
            AP + L SW   LL         P  +L  L + N +R CG+VF  GDIAWNCRTCQ D+TCVLCD CFR SNH+GHEV+FHR APGGC
Sbjct:   73 APPKQLRSWATHLLCCRVAQNDGPFGLLAKLAETN-QRACGHVFAAGDIAWNCRTCQKDNTCVLCDACFRSSNHQGHEVFFHRAAPGGC 160          
BLAST of mRNA_S-ischiensis_contig8.19292.1 vs. uniprot
Match: K8YNA8_NANGC (E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YNA8_NANGC)

HSP 1 Score: 106 bits (264), Expect = 4.230e-26
Identity = 52/112 (46.43%), Postives = 62/112 (55.36%), Query Frame = 0
Query:   44 LQELVSVVLREAPKESLASWCNWLL-------------GGGGDPARVLGSLKDANV---RRVCGYVFKRGDIAWNCRTCQMDSTCVLCDGCFRRSNHRGHEVYFHRTAPGGC 139
            L+E    V R  P + LA W +  L             G G       G LK  ++   R VCGY FKRGD+ WNCR+CQ D TCV CD CFR S+H GHEVYFH+ +PGGC
Sbjct:   11 LRECARQVFRRGPVDKLADWGDHFLCVEVGPRKDAEPTGSGSGREIDTGRLKSLHLTAQRGVCGYTFKRGDLCWNCRSCQTDPTCVQCDPCFRASDHAGHEVYFHQASPGGC 122          
BLAST of mRNA_S-ischiensis_contig8.19292.1 vs. uniprot
Match: A0A7R9YGT1_9STRA (E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YGT1_9STRA)

HSP 1 Score: 110 bits (276), Expect = 1.510e-25
Identity = 49/90 (54.44%), Postives = 61/90 (67.78%), Query Frame = 0
Query:   51 VLREAPKESLASWCNWLLGGGGD-PARVLGSLKDANVRRVCGYVFKRGDIAWNCRTCQMDSTCVLCDGCFRRSNHRGHEVYFHRTAPGGC 139
            VLR A    ++ W    L    D  AR L SL+DAN +R CGYVF+ GDI WNCRTC+ DSTCV CD CF+ S+H GH+V+FH+ +P GC
Sbjct:   54 VLRAADASEVSLWLKSFLAFAFDGDARRLESLEDANPKRYCGYVFREGDICWNCRTCEKDSTCVQCDACFQLSDHTGHDVFFHKASPNGC 143          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig8.19292.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G3D3_ECTSI9.440e-4456.30E3 ubiquitin-protein ligase n=1 Tax=Ectocarpus sil... [more]
A0A7S3XNE3_HETAK9.170e-3346.67E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Het... [more]
A0A4D9D1X7_9STRA2.190e-3041.77E3 ubiquitin-protein ligase n=6 Tax=Monodopsidacea... [more]
A0A7S4EF35_9STRA6.420e-2980.70E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Pse... [more]
A0A7S3P848_9STRA3.550e-2883.02E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Amp... [more]
A0A7S2SCK7_9STRA2.730e-2753.33E3 ubiquitin-protein ligase (Fragment) n=2 Tax=Euc... [more]
A0A7S4V6U6_9STRA9.510e-2780.77E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Dit... [more]
A0A7S3ZP19_9STRA1.750e-2658.43E3 ubiquitin-protein ligase n=2 Tax=Pelagomonas ca... [more]
K8YNA8_NANGC4.230e-2646.43E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Nan... [more]
A0A7R9YGT1_9STRA1.510e-2554.44E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Pin... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003126Zinc finger, UBR-typeSMARTSM00396push_1coord: 88..139
e-value: 2.9E-7
score: 40.1
IPR003126Zinc finger, UBR-typePFAMPF02207zf-UBRcoord: 90..136
e-value: 4.6E-12
score: 45.9
IPR003126Zinc finger, UBR-typePROSITEPS51157ZF_UBRcoord: 88..139
score: 7.754
NoneNo IPR availableGENE3D2.10.110.30coord: 90..139
e-value: 4.1E-15
score: 57.5
NoneNo IPR availablePANTHERPTHR21497:SF24E3 UBIQUITIN-PROTEIN LIGASE UBR1coord: 47..139
IPR039164E3 ubiquitin-protein ligase UBR1-likePANTHERPTHR21497UBIQUITIN LIGASE E3 ALPHA-RELATEDcoord: 47..139

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig8contigS-ischiensis_contig8:371946..377947 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig8.19292.1mRNA_S-ischiensis_contig8.19292.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig8 371946..377977 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig8.19292.1 ID=prot_S-ischiensis_contig8.19292.1|Name=mRNA_S-ischiensis_contig8.19292.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=139bp
MPRARLLARDGRVLWTKGDASFPQPPEVVREICGDGGTADLRRLQELVSV
VLREAPKESLASWCNWLLGGGGDPARVLGSLKDANVRRVCGYVFKRGDIA
WNCRTCQMDSTCVLCDGCFRRSNHRGHEVYFHRTAPGGC
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003126Znf_UBR
IPR039164UBR1-like