prot_S-ischiensis_contig8.19290.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig8.19290.1
Unique Nameprot_S-ischiensis_contig8.19290.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length200
Homology
BLAST of mRNA_S-ischiensis_contig8.19290.1 vs. uniprot
Match: A0A6H5K8R4_9PHAE (E3 ubiquitin-protein ligase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8R4_9PHAE)

HSP 1 Score: 147 bits (372), Expect = 1.760e-37
Identity = 85/187 (45.45%), Postives = 114/187 (60.96%), Query Frame = 0
Query:   11 EARRM-AAECLWSNAMSFLTAWLDVTATCARW-FHPVVPREASPVKPLPCVDKRDEHDVLTDPVSLHLPLHRCIAKMVATMAETGLPLPTVPPKARLGLVEFPLRVLAYHAQVMSRLWVRNGATVMSQAINYGSPPLCKHLRDLDLVALQMGVRSMGAGPFLAVALRKFRLEEWLLDPFSAPATASS 195
            E+RR+ A E L    ++ L  W+D     A +   PV     S  +  P + KR +  V  + VSLHLPLHR   K+V T+A+ G+ +P VP    L LVEFP+R L +HAQVM+RLWVRNG +   Q +NY SP LC+H+RDLD+VALQ+G   MGA  FL + + KF LEE LL+P     T ++
Sbjct:  501 ESRRVEAGEVLSRRGLAALKTWVDSRNDTAVYKTTPVSGGRLS--RAFPGLRKRVDFQVHCEAVSLHLPLHRFFCKVVQTLAQEGMAIPRVPQDVLLPLVEFPMRALVFHAQVMARLWVRNGLSAEHQVMNYSSPSLCRHMRDLDMVALQVGCLHMGAENFLGLLIDKFALEELLLEPVPEGETTAA 685          
BLAST of mRNA_S-ischiensis_contig8.19290.1 vs. uniprot
Match: D7G3D3_ECTSI (E3 ubiquitin-protein ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3D3_ECTSI)

HSP 1 Score: 135 bits (341), Expect = 2.300e-33
Identity = 78/173 (45.09%), Postives = 105/173 (60.69%), Query Frame = 0
Query:   11 EARRM-AAECLWSNAMSFLTAWLDVTATCARW-FHPVVPREASPVKPLPCVDKRDEHDVLTDPVSLHLPLHRCIAKMVATMAETGLPLPTVPPKARLGLVEFPLRVLAYHAQVMSRLWVRNGATVMSQAINYGSPPLCKHLRDLDLVALQMGVRSMGAGPFLAVALRKFRLEE 181
            E+RR+ A E L    ++ L  W+D       +   PV     S  +  P + +R +  V  + VSLHLPLHR   K+V T+A+ G+ +P VP    L LVEFP+R L +HAQVM+RLWVRNG +   Q  NY SP LC+H+RDLD+VALQ+G   MGA  FL + + KF LE+
Sbjct:  826 ESRRVEAGEVLSRRGLAALKTWVDSRNNTEVYKTTPVSGGRLS--RAFPDLRERVDFQVHGEAVSLHLPLHRFFCKVVQTLAQEGMAIPRVPQDVLLPLVEFPMRALVFHAQVMARLWVRNGLSAQHQVGNYSSPSLCRHMRDLDMVALQVGCLHMGAENFLGLLIDKFALED 996          
BLAST of mRNA_S-ischiensis_contig8.19290.1 vs. uniprot
Match: A0A836CB31_9STRA (E3 ubiquitin-protein ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB31_9STRA)

HSP 1 Score: 115 bits (288), Expect = 3.180e-26
Identity = 61/124 (49.19%), Postives = 76/124 (61.29%), Query Frame = 0
Query:   72 VSLHLPLHRCIAKMVATMAETGLPLPTVPPKARL-----GLVEFPLRVLAYHAQVMSRLWVRNGATVMSQAINYGSPPLCKHLRDLDLVALQMGVRSMGAGPFLAVALRKFRLEEWLLDPFSAP 190
            VS HLPLHR +A++V    E G   P     A L     GL+E+PLRVL +HAQVM  LWVRNG +  SQA+NY SPPLC+ LR+LD VALQ     +G   F+   L +F L  W+ DP  +P
Sbjct:  725 VSPHLPLHRFVAQLVQAAVEEGRAPPLRSAGAALSADALGLMEYPLRVLVWHAQVMVGLWVRNGVSAHSQAVNYASPPLCRQLRNLDFVALQYAATVVGPDVFMHTYLERFGLRRWITDPQFSP 848          
BLAST of mRNA_S-ischiensis_contig8.19290.1 vs. uniprot
Match: A0A7S2R3G1_9STRA (E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R3G1_9STRA)

HSP 1 Score: 91.7 bits (226), Expect = 2.730e-20
Identity = 55/118 (46.61%), Postives = 69/118 (58.47%), Query Frame = 0
Query:   65 HDVLTDPVSLHLPLHRCIAKMVATMAETGL---PLPTVPP------------KARLG--LVEFPLRVLAYHAQVMSRLWVRNGATVMSQAINYGSPPLCKHLRDLDLVALQMGVRSMG 165
            HD LTDPVS+HLPLHR +A +   +   G+   P+ TV P            +A LG  +VE PLR L + A V S LW RNG+    QA+NY   PLC+H RDLDL ALQ+G   +G
Sbjct:    8 HDPLTDPVSVHLPLHRFVALLGTMLPHAGVAFPPVATVLPDVGLEEDPQTGRRAGLGAIIVELPLRSLVFCAHVGSGLWRRNGSAAALQALNYSHLPLCQHFRDLDLRALQLGTFFLG 125          
BLAST of mRNA_S-ischiensis_contig8.19290.1 vs. uniprot
Match: A0A7S2GTB9_9STRA (E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GTB9_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 5.530e-20
Identity = 52/106 (49.06%), Postives = 67/106 (63.21%), Query Frame = 0
Query:   66 DVLTDPVSLHLPLHRCIAKMVATMAETGLPLPTVP---PKARLG--LVEFPLRVLAYHAQVMSRLWVRNGATVMSQAINYGSPPLCKHLRDLDLVALQMGVRSMGA 166
            +V  DPVSLH+PLHR  A++ A   E GL LP +P   P  RLG  ++E PLR L ++AQV   +W RN  +  S A NY +PPLC HLRDLDL A+Q+    + A
Sbjct:   15 NVQRDPVSLHIPLHRFFAQVTAQSLELGLGLPELPLGCPTKRLGAAMIEHPLRALVFNAQVTIGMWRRN-PSAQSMADNYVAPPLCYHLRDLDLKAIQISALLLPA 119          
BLAST of mRNA_S-ischiensis_contig8.19290.1 vs. uniprot
Match: A0A0D2WLD2_CAPO3 (E3 ubiquitin-protein ligase n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2WLD2_CAPO3)

HSP 1 Score: 72.4 bits (176), Expect = 2.750e-11
Identity = 52/160 (32.50%), Postives = 78/160 (48.75%), Query Frame = 0
Query:   64 EHDVLTDPVSLHLPLHRCIAKMVATMAETGLPLPTVPPKARLG----LVEFPLRVLAYHAQVMSRLWVRNGATVMSQAINYGSPPLCKHLRDLDLVALQM------------GVRSMG--------------AGPFLAVALRKFRLEEWLLDPFSAPATA 193
            ++DV   PVSLH+PLHR +A ++A  A   + L TV  +A  G    ++E PLR++   AQ    LWVRNGA++++Q  NY      +H  + DL+ +Q              VR+M               A  FL + +R+F ++ W    F A  TA
Sbjct: 1121 DYDVSLRPVSLHIPLHRFLAGLIAEAAAKHINLATVMSRANRGFLLHVMEHPLRLMILLAQSRPNLWVRNGASLINQLYNYSGMMFREHTLERDLMLIQAVAAQTLAGDDDSNVRAMQTETSQPASSTVDSRATSFLLMLMRRFAVDNW----FEADPTA 1276          
BLAST of mRNA_S-ischiensis_contig8.19290.1 vs. uniprot
Match: A0A7S4RYG3_9STRA (E3 ubiquitin-protein ligase (Fragment) n=4 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RYG3_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 4.530e-11
Identity = 35/98 (35.71%), Postives = 52/98 (53.06%), Query Frame = 0
Query:  106 GLVEFPLRVLAYHAQVMSRLWVRNGATVMSQAINYGSPPLCKHLRDLDLVALQMGVRSM----GAGPFLAVALRKFRLEEWLLDPFSAPATASSTGRN 199
             L + PLR LA   Q+   LW RNG++    A+NYGS PLC+  RDLDL  +Q+    +    GA    ++ + +F ++ +L DP     T S   R+
Sbjct:  416 SLCDHPLRCLAASQQIERHLWARNGSSATGMALNYGSAPLCRSFRDLDLTLVQLSASGLSIGLGARRVFSLLVNRFSMDGYLCDPKLTSGTGSGASRS 513          
BLAST of mRNA_S-ischiensis_contig8.19290.1 vs. uniprot
Match: A0A7S2L6M7_9STRA (E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2L6M7_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 1.580e-10
Identity = 35/85 (41.18%), Postives = 48/85 (56.47%), Query Frame = 0
Query:  106 GLVEFPLRVLAYHAQVMSRLWVRNGATVMSQAINYGSPPLCKHLRDLDLVALQMGVRS----MGAGPFLAVALRKFRLEEWLLDP 186
             L + PLR +A   Q+   +W +NGA+    A+NYGS PLC+ LRDLDL  +QM        +GA    A+   +F LE +L DP
Sbjct:  305 SLCDHPLRCIAASQQIDHHMWAKNGASTAGMALNYGSIPLCRSLRDLDLTMVQMSACGFNVGLGARRVFALLSNRFSLENYLCDP 389          
BLAST of mRNA_S-ischiensis_contig8.19290.1 vs. uniprot
Match: UPI000A2A97C1 (E3 ubiquitin-protein ligase UBR2 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A97C1)

HSP 1 Score: 70.1 bits (170), Expect = 1.650e-10
Identity = 42/127 (33.07%), Postives = 66/127 (51.97%), Query Frame = 0
Query:   64 EHDVLTDPVSLHLPLHRCIAKMVATMAETGLPLPTV------PPKARLGLVEFPLRVLAYHAQVMSRLWVRNGATVMSQAINYGSPPLCKHLRDLDLVALQMGVRSMGAGPFLAVALRKFRLEEWLL 184
            ++DV   PVS+HLP+ R +A ++A      + L T+        K +L L+E  LR L   AQV S +W RNG  +M+Q  +Y +      + D D++ +Q     +    FLA+ L KF + +W L
Sbjct:  601 KYDVSKSPVSIHLPVSRYLAALLAGCHRYNIELSTLFVNECKDEKLKLFLMEQSLRTLVMVAQVHSGMWRRNGYAIMNQVFHYQNVKCRSEMYDKDVIMMQXSASYLETDHFLAILLEKFGVLDWSL 727          
BLAST of mRNA_S-ischiensis_contig8.19290.1 vs. uniprot
Match: A0A068RWL6_9FUNG (E3 ubiquitin-protein ligase n=2 Tax=Lichtheimia TaxID=688353 RepID=A0A068RWL6_9FUNG)

HSP 1 Score: 67.8 bits (164), Expect = 1.040e-9
Identity = 43/150 (28.67%), Postives = 68/150 (45.33%), Query Frame = 0
Query:   64 EHDVLTDPVSLHLPLHRCIA-----------------------KMVATMAETGLPLPTVPPKARLGLVEFPLRVLAYHAQVMSRLWVRNGATVMSQAINYGSPPLCKHLRDLDLVALQMGVRSMGAGPFLAVALRKFRLEEWLLDPFSAP 190
            E+D+L+ PVS H PLH  +A                         V T+ +       V P   L ++E+PLR +A+ AQ+ + +WVRNG  + +QA +Y    L ++  D D+  LQ+G  ++     L   + +F L  W     S P
Sbjct:  875 EYDILSQPVSFHHPLHWLLACFLEHAFVLNDQTIELAGYPGRFAQVTTLFKNSTDGQPVTPDTLLPILEYPLRTIAFSAQIRAGVWVRNGYGIRNQAHHYRDISLRENTYDADVFLLQVGFATIDPDKLLVTLMDRFGLYSWFNGERSHP 1024          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig8.19290.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K8R4_9PHAE1.760e-3745.45E3 ubiquitin-protein ligase n=1 Tax=Ectocarpus sp.... [more]
D7G3D3_ECTSI2.300e-3345.09E3 ubiquitin-protein ligase n=1 Tax=Ectocarpus sil... [more]
A0A836CB31_9STRA3.180e-2649.19E3 ubiquitin-protein ligase n=1 Tax=Tribonema minu... [more]
A0A7S2R3G1_9STRA2.730e-2046.61E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Rhi... [more]
A0A7S2GTB9_9STRA5.530e-2049.06E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Dic... [more]
A0A0D2WLD2_CAPO32.750e-1132.50E3 ubiquitin-protein ligase n=1 Tax=Capsaspora owc... [more]
A0A7S4RYG3_9STRA4.530e-1135.71E3 ubiquitin-protein ligase (Fragment) n=4 Tax=Dit... [more]
A0A7S2L6M7_9STRA1.580e-1041.18E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Ske... [more]
UPI000A2A97C11.650e-1033.07E3 ubiquitin-protein ligase UBR2 n=1 Tax=Exaiptasi... [more]
A0A068RWL6_9FUNG1.040e-928.67E3 ubiquitin-protein ligase n=2 Tax=Lichtheimia Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039164E3 ubiquitin-protein ligase UBR1-likePANTHERPTHR21497UBIQUITIN LIGASE E3 ALPHA-RELATEDcoord: 23..184

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig8contigS-ischiensis_contig8:362285..365209 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig8.19290.1mRNA_S-ischiensis_contig8.19290.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig8 362283..365209 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig8.19290.1 ID=prot_S-ischiensis_contig8.19290.1|Name=mRNA_S-ischiensis_contig8.19290.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=200bp
GRGRGQEQGLEARRMAAECLWSNAMSFLTAWLDVTATCARWFHPVVPREA
SPVKPLPCVDKRDEHDVLTDPVSLHLPLHRCIAKMVATMAETGLPLPTVP
PKARLGLVEFPLRVLAYHAQVMSRLWVRNGATVMSQAINYGSPPLCKHLR
DLDLVALQMGVRSMGAGPFLAVALRKFRLEEWLLDPFSAPATASSTGRNR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039164UBR1-like