prot_S-ischiensis_contig8.19289.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig8.19289.1
Unique Nameprot_S-ischiensis_contig8.19289.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length134
Homology
BLAST of mRNA_S-ischiensis_contig8.19289.1 vs. uniprot
Match: A0A6H5K8R4_9PHAE (E3 ubiquitin-protein ligase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8R4_9PHAE)

HSP 1 Score: 74.3 bits (181), Expect = 7.980e-13
Identity = 45/93 (48.39%), Postives = 62/93 (66.67%), Query Frame = 0
Query:   14 IPAKGMVLMAEECLTLLTWMVTELPAPPGPEAAGRALRRELVHKLAAGARTHSEAAAVVANVTQAN----SEEQLEQVLRSISKVRHPHSSSA 102
            IP    +L+AEE L+LL  ++TELP P G  +A  ALRRE+VH+LA+   THSE AAV AN+ + +     EE L+QV+  + +VR P S+SA
Sbjct:  759 IPEGARLLLAEEFLSLLVMLLTELPRPAGRASARGALRREVVHRLASSECTHSEVAAVTANLMEGDVEPEPEEFLDQVIHEVGEVRGPSSASA 851          
BLAST of mRNA_S-ischiensis_contig8.19289.1 vs. uniprot
Match: D7G3D4_ECTSI (E3 ubiquitin-protein ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3D4_ECTSI)

HSP 1 Score: 58.9 bits (141), Expect = 1.880e-7
Identity = 33/63 (52.38%), Postives = 44/63 (69.84%), Query Frame = 0
Query:   33 MVTELPAPPGPEAAGRALRRELVHKLAAGARTHSEAAAVVANVTQANSEEQLEQVLRSISKVR 95
            ++TELP P G  +A  ALRRE+VH+LA+   THSE AAV AN+ +   EE L+QVL  + +VR
Sbjct:    2 LLTELPRPAGRASARGALRREVVHRLASSECTHSEVAAVTANLMEPEPEEFLDQVLHEVGEVR 64          
BLAST of mRNA_S-ischiensis_contig8.19289.1 vs. uniprot
Match: A0A7S4C3Q8_CHRCT (E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4C3Q8_CHRCT)

HSP 1 Score: 52.8 bits (125), Expect = 2.190e-5
Identity = 27/46 (58.70%), Postives = 33/46 (71.74%), Query Frame = 0
Query:   22 MAEECLTLLTWMVTELPAPPGPEAAGRALRRELVHKLAAGARTHSE 67
            + EE L LL  +VTELP PPG EAA   LRRE++H+LA  A +HSE
Sbjct:  124 LCEEFLLLLIQLVTELPPPPGDEAAVHNLRREVIHRLAVQASSHSE 169          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig8.19289.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5K8R4_9PHAE7.980e-1348.39E3 ubiquitin-protein ligase n=1 Tax=Ectocarpus sp.... [more]
D7G3D4_ECTSI1.880e-752.38E3 ubiquitin-protein ligase n=1 Tax=Ectocarpus sil... [more]
A0A7S4C3Q8_CHRCT2.190e-558.70E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Chr... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig8contigS-ischiensis_contig8:360916..362020 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig8.19289.1mRNA_S-ischiensis_contig8.19289.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig8 360915..362020 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig8.19289.1 ID=prot_S-ischiensis_contig8.19289.1|Name=mRNA_S-ischiensis_contig8.19289.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=134bp
VASDEGEDEAPGHIPAKGMVLMAEECLTLLTWMVTELPAPPGPEAAGRAL
RRELVHKLAAGARTHSEAAAVVANVTQANSEEQLEQVLRSISKVRHPHSS
SAPSASSPSGAATATAATPAPPGAGGNVAAAGGG
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