prot_S-ischiensis_contig8.19247.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig8.19247.1
Unique Nameprot_S-ischiensis_contig8.19247.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length145
Homology
BLAST of mRNA_S-ischiensis_contig8.19247.1 vs. uniprot
Match: A0A6H5L805_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L805_9PHAE)

HSP 1 Score: 152 bits (383), Expect = 5.390e-40
Identity = 70/111 (63.06%), Postives = 88/111 (79.28%), Query Frame = 0
Query:    1 MALVDTQGFTVAVDRSLFGPQGRRWIEKKLPEVVTNLSFIAVSGFGACLLMYQVCKDYSENGLWALGHLPKHLANGVMLHVVARLLRWHIDRLVMRSFLPRAETPLPNFFG 111
            MALVDTQGF +AVDRSLFGPQGRRWIE+KLP V TNL+F+AVS FGACLL++ + ++Y  +G WA+   PKH+ N V+LH+VAR LRWHIDR++  +F    E  LP+FFG
Sbjct:    1 MALVDTQGFVMAVDRSLFGPQGRRWIERKLPNVATNLAFVAVSAFGACLLVFHITREYYTSGYWAILQTPKHILNAVVLHLVARALRWHIDRMLGVNFAAGDEA-LPDFFG 110          
BLAST of mRNA_S-ischiensis_contig8.19247.1 vs. uniprot
Match: A0A835ZHV2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHV2_9STRA)

HSP 1 Score: 137 bits (346), Expect = 1.410e-35
Identity = 64/101 (63.37%), Postives = 80/101 (79.21%), Query Frame = 0
Query:    1 MALVDTQGFTVAVDRSLFGPQGRRWIEKKLPEVVTNLSFIAVSGFGACLLMYQVCKDYSENG-LWALGHLPKHLANGVMLHVVARLLRWHIDRLVMRSFLP 100
            MALVD    TVAVDRSLFGPQGRRWIE+KLPEV +N++FI VSGFGACLLM+ +C DY   G +  LG LPKH+A   ++H++A+LLRWHI ++V  SF+P
Sbjct:    1 MALVDINPLTVAVDRSLFGPQGRRWIERKLPEVTSNMTFIMVSGFGACLLMFGICTDYQRFGFVGGLGCLPKHIAAATLVHLLAKLLRWHITQVVQGSFMP 101          
BLAST of mRNA_S-ischiensis_contig8.19247.1 vs. uniprot
Match: A0A835YVS8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVS8_9STRA)

HSP 1 Score: 102 bits (253), Expect = 2.030e-22
Identity = 52/87 (59.77%), Postives = 60/87 (68.97%), Query Frame = 0
Query:   27 EKKLPEVVTNLSFIAVSGFGACLLMYQVCKDYSENGLW-ALGHLPKHLANGVMLHVVARLLRWHIDRLVMRSFLPRAETPLPNFFGR 112
            E KLP VV+N++FI VSGFGACLLM+ VC DY   GL      LPKHLAN  +LH+VARLLRWHI R V R+F P  + P  N F R
Sbjct:   61 EHKLPYVVSNITFILVSGFGACLLMFTVCADYQRGGLLRGAAALPKHLANAAVLHLVARLLRWHIGRTVYRAFAPADDRP--NVFTR 145          
BLAST of mRNA_S-ischiensis_contig8.19247.1 vs. uniprot
Match: D8LSC9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSC9_ECTSI)

HSP 1 Score: 59.7 bits (143), Expect = 6.480e-9
Identity = 23/46 (50.00%), Postives = 35/46 (76.09%), Query Frame = 0
Query:   53 QVCKDYSENGLWALGHLPKHLANGVMLHVVARLLRWHIDRLVMRSF 98
            Q+ ++Y ++G WA+   PKH+ N V+LH+VAR LRWHIDR++  +F
Sbjct:    8 QITREYYKSGYWAILQTPKHILNAVVLHLVARALRWHIDRMLGVNF 53          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig8.19247.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5L805_9PHAE5.390e-4063.06Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A835ZHV2_9STRA1.410e-3563.37Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YVS8_9STRA2.030e-2259.77Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D8LSC9_ECTSI6.480e-950.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 53..71
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 91..145
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 72..90
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 33..52
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..32

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig8contigS-ischiensis_contig8:166780..167345 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig8.19247.1mRNA_S-ischiensis_contig8.19247.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig8 166780..167458 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig8.19247.1 ID=prot_S-ischiensis_contig8.19247.1|Name=mRNA_S-ischiensis_contig8.19247.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=145bp
MALVDTQGFTVAVDRSLFGPQGRRWIEKKLPEVVTNLSFIAVSGFGACLL
MYQVCKDYSENGLWALGHLPKHLANGVMLHVVARLLRWHIDRLVMRSFLP
RAETPLPNFFGRSGGGRQDSASAVVWPWQADTAPRRQHQSQPLST
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