mRNA_S-ischiensis_contig109.1942.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig109.1942.1
Unique NamemRNA_S-ischiensis_contig109.1942.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
BLAST of mRNA_S-ischiensis_contig109.1942.1 vs. uniprot
Match: D8LBF3_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBF3_ECTSI)

HSP 1 Score: 337 bits (863), Expect = 1.830e-110
Identity = 197/350 (56.29%), Postives = 234/350 (66.86%), Query Frame = 1
Query:   13 DVDSLMRDLDNVLIDDQDPHRAFDLGGGGVGGEGAPDSFDASQLQAPNANDFSNARLIEELETRKMRPTGFRDQDVITLQRVLDEEFELEKENLIKQQREKKEQAAKQAGLQRKRMMLERQLKEEKAEIEKDHRVEFWLSLVKQNATPPAARIEVNSITARALAKSMWTNSSLTCLDLSRTGLDDFAGAYVARLLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLTRIRQGEDTSGFTAFAAMLEANKTLTSVNLWRCALGPQAGAALAKGMESNHYLTFLETGHNGLTLMDQQSLTAKLEDNVRRFEEQAALKREEQAAADKVVLEQKTIQEQLR 1062
            D D+ M D  + L D  DP+              A ++ DAS LQAPNANDFSNARLIEELE R  R +GFRDQDV+TLQ++LD EFELEKE++IK QREK+EQAAKQAGLQRKRMMLERQL+EE +EI KD R+EFWL+LVKQNATPP ARI+VNS+TARALAKSMWTN+SLT LDLSR G+DD AG YVARLLK                                          LT    G + SG  A   M   N TLTSVNLWRCALG +AG AL++GMESNH +TFLE G NGL + DQ  +   LE+N +RFEE  A++R+E + ADK++ E+K +QEQLR
Sbjct:    3 DNDAFMEDYGDSLNDAGDPYETKTT-------RNAAEALDAS-LQAPNANDFSNARLIEELENRNSRVSGFRDQDVVTLQKILDAEFELEKESIIKHQREKREQAAKQAGLQRKRMMLERQLREEISEIGKDQRIEFWLNLVKQNATPPTARIDVNSVTARALAKSMWTNTSLTSLDLSRNGIDDAAGTYVARLLKRNTALVNVALGSNQLGVFACRAFGESLCSNSTLKCLSLESNSLTS--DGANMSGIQALTDMFSKNSTLTSVNLWRCALGAEAGVALSRGMESNHTITFLEVGLNGLAMADQHKVKTALENNFKRFEECQAVRRQELSIADKILAEEKAMQEQLR 342          
BLAST of mRNA_S-ischiensis_contig109.1942.1 vs. uniprot
Match: A0A835YIK2_9STRA (Leucine rich repeat protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIK2_9STRA)

HSP 1 Score: 298 bits (763), Expect = 4.010e-95
Identity = 232/385 (60.26%), Postives = 286/385 (74.29%), Query Frame = 1
Query:    1 MALDDVDSLMRDLDNVLIDDQDPHRAFDLGGGGVGGEGAP-DSFDASQLQAPNANDFSNARLIEELETRKMRPTGFRDQDVITLQRVLDEEFELEKENLIKQQREKKEQAAKQAGLQRKRMMLERQLKEEKAEIEKDHRVEFWLSLVKQNATPPAARIEVNSITARALAKSMWTNSSLTCLDLSRTGLDDFAGAYVARLLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLTRIRQGEDTSGFTAFAAMLEANKTLTSVNLWRCALGPQAGAALAKGMESNHYLTFLETGHNGLTLMDQQSLTAKLEDNVRRFE---EQAALKREEQAAADKVVLEQKTIQEQLRKERALREWLEEQKQLRAEERRQEQEKR 1143
            MA ++ D+L+  LD+ LIDD+D  +  +     +G   +P ++FD SQLQAPNANDFSNARLIEELE R+MRPTGFRDQD+I LQ+VLD EFE EKE+LI+Q  EKKEQA K+AGLQR+R  LE+QL EEK E+ ++  V  WLSLVKQ+ TP  ARIEVNSI+ARALAK+MWTN+SLT LDL+R  LDDFAGAY      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LT   +GE  +GF      L  N  LTS+NLWRC LG  AG  LA G+++N  +TFLE G+N L L D + + A+++DN   ++   +QA  K+ EQ   D+++ E+K  Q+ LRKER L +WLE Q+ LRAEERR E+E+R
Sbjct:    1 MAANEADTLLHVLDDDLIDDEDRQQDIEST---LGDRKSPGETFDTSQLQAPNANDFSNARLIEELEGRRMRPTGFRDQDIIALQKVLDAEFEQEKEHLIRQHNEKKEQAMKEAGLQRRRAQLEKQLTEEKQEVAQNKIVAGWLSLVKQDETPLTARIEVNSISARALAKAMWTNTSLTSLDLARNNLDDFAGAYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLTN--EGEKPAGFRYMVQALSKNAALTSLNLWRCGLGTPAGHDLAAGIQANRTITFLELGNNSLALSDLRQIGARVKDNRCHYDALQQQAMAKQREQ---DRILQEEKKAQDLLRKERELHDWLEAQRLLRAEERRAEEEER 377          
BLAST of mRNA_S-ischiensis_contig109.1942.1 vs. uniprot
Match: A0A7S3XPA2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XPA2_HETAK)

HSP 1 Score: 175 bits (444), Expect = 3.060e-47
Identity = 175/374 (46.79%), Postives = 227/374 (60.70%), Query Frame = 1
Query:   19 DSLMRDLDNVLIDDQDPHRAFDLGGGGVGGEGAPDSFDASQLQAPNANDFSNARLIEELETRKMRPTGFRDQDVITLQRVLDEEFELEKENLIKQQREKKEQAAKQAGLQRKRMMLERQLKEEKAEIEKDHRVEFWLSLVKQNATPPAARIEVNSITARALAKSMWTNSSLTCLDLSRTGLDDFAGAYVARLLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLTRIRQGEDTSGFTAFAAMLEANKTLTSVNLWRCALGPQAGAALAKGMESNHYLTFLETGHNGLTLMDQQSLTAKLEDN------VRRFEEQAALKREEQAAADKVVLEQKTIQEQLRKERALREWLEEQKQLRAEER 1122
            D++ ++ +++L    DP    D+     G  G  D  D    Q  +A   +N  L  ELE R  +P GF   D   LQ+  D E E      +K++ E++E+ A QAGL R++ ++E+QLKEE   I++D R E WL+LV+ +ATPP AR+E+ S+ AR LAK++W N SL  LDLSR GLDD AGA+      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LT     E T G   FA ML+ N TLTS+NL+RC LGP+AG  L  G+E N  L FL+ G N         +  K+++N      ++   +QAA KR ++ A      E        +KER  ++WLEEQKQ RAEER
Sbjct:    7 DAVNKEFEDLLDHFADPDDEIDITA--FGATGTTDLMDLQDSQPRDALRLTNDELNAELEMRGEKPKGFFTDDAKVLQKYFDVEHEEYLAKQMKERAEQQEKLAAQAGLIRRKRLVEKQLKEELLAIQRDRRAEHWLALVRGDATPPQARVELGSVAARCLAKALWGNGSLVSLDLSRNGLDDKAGAFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLTESGLAEKT-GAPEFADMLKHNNTLTSLNLFRCHLGPEAGTELLGGLEQNASLVFLDVGGNHFLQSHDARINGKIQENQSLRADLKSQAKQAAEKRSKEEA------EXXXXXXXXQKERDTKQWLEEQKQKRAEER 371          
BLAST of mRNA_S-ischiensis_contig109.1942.1 vs. uniprot
Match: F0Y577_AURAN (F-box domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y577_AURAN)

HSP 1 Score: 177 bits (449), Expect = 1.370e-45
Identity = 169/361 (46.81%), Postives = 225/361 (62.33%), Query Frame = 1
Query:   82 DLGGGGVGGEGAPDSFDASQLQAPNANDFSNARLIEELETRKMRPTGFRDQDVITLQRVLDEEFELEKENLIKQQREKKEQAAKQAGLQRKRMMLERQLKEEKAEIEKDHRVEFWLSLVKQNATPPAARIEVNSITARALAKSMWTNSSLTCLDLSRTGLDDFAGAYVARLLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLTRIRQGEDTSGFTAFAAMLEANKTLTSVNLWRCALGPQAGAALAKGMESNHYLTFLETGHNGLTLMDQQSLTAKLEDNVRRFEEQAALKREEQAAADKVVLEQKTIQEQLRKE--------------RALREWLEEQKQLRAEER 1122
            D   G   G    DS D + L+  +A       L+ E+E R + P GF + D   LQ+  D+E   E E + +++RE+++++  +A LQ+KR+ LE+QL+EE+  +  D ++E WLS+V+ + T P+ARI VNS+TARALAK+MW N SLT LDLSR  L DFAGA + R+LK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  T   +  D +G  A A  L +N +LT +NLWRC LG  AGA LAK +  N  +  L+ G+NG+ + D++ +  K++ N          K+E +A A    L+    QEQLRKE              R L EW++ QK LRA ER
Sbjct:   19 DADDGDENGREREDSIDLADLKPMDAFLMKMEDLVTEMERRHLHPKGFFNDDAKELQKYFDQEHFKELEKIKEERREQRQRSXMKAQLQKKRLQLEKQLREEQDAVANDPQIEAWLSVVRSDQTRPSARIGVNSVTARALAKAMWNNKSLTSLDLSRNDLSDFAGAQIGRMLKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTN--ESTDQTGVVALAQALSSNASLTLLNLWRCDLGTTAGAELAKALHLNSSIINLDVGNNGVLVADKRRIADKVDAN----------KKETRAIA----LQNHAFQEQLRKEAAGRQAIADEEQKARELEEWMDAQKDLRAAER 363          
BLAST of mRNA_S-ischiensis_contig109.1942.1 vs. uniprot
Match: A0A7S3ZT07_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZT07_9STRA)

HSP 1 Score: 162 bits (409), Expect = 2.670e-42
Identity = 143/309 (46.28%), Postives = 191/309 (61.81%), Query Frame = 1
Query:  112 GAPDSFDASQLQAPNANDFSNARLIEELETRKMRPTGFRDQDVITLQRVLDEEFELEKENLIKQQREKKEQAAKQAGLQRKRMMLERQLKEEKAEIEKDHRVEFWLSLVKQNATPPAARIEVNSITARALAKSMWTNSSLTCLDLSRTGLDDFAGAYVARLLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLTRIRQGEDTSGFTAFAAMLEANKTLTSVNLWRCALGPQAGAALAKGMESNHYLTFLETGHNGLTLMDQQSLTAKLEDNVRRFEEQAALKREEQAAADKVVLEQ 1038
            G  D  D S ++  +A +     L+ E E R M P GF + D   LQ+VLD+EF    E L  ++R   ++   +A LQ+KR+ LE+QL+EE+  I      + WL+ +K N T  A RIE +SI  RALAK++W++SS+TCLDLSR GL DFAGA + R+LK  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      LT   +  D +G  A A  L +N TLT +N+WRC LG  AGAA+A  + +N  L   + GH G+  +D Q +  ++  N R   E  A  + E+A  D++  E+
Sbjct:   28 GGDDDLDFSDMKPMDAFEMKMEDLVVEFERRGMHPKGFFNDDARELQKVLDKEFSENLEKLKAEKRAALQRNRMKAKLQKKRLQLEKQLREEQDAIHDSLDAKAWLNTIKNNQTRDACRIECDSIVCRALAKALWSSSSITCLDLSRNGLSDFAGAQLGRMLKRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNMETNPLTN--ESTDQTGVVALAKALGSNTTLTRLNMWRCDLGTAAGAAIADALVANETLIDFDVGHGGILELDAQRIADRIAHNKR---ETKAKNKREKAYRDQLAREE 331          
BLAST of mRNA_S-ischiensis_contig109.1942.1 vs. uniprot
Match: A0A6H5JI07_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI07_9PHAE)

HSP 1 Score: 154 bits (388), Expect = 3.070e-42
Identity = 91/142 (64.08%), Postives = 106/142 (74.65%), Query Frame = 1
Query:   13 DVDSLMRDLDNVLIDDQDPHRAFDLGGGGVGGEGAPDSFDASQLQAPNANDFSNARLIEELETRKMRPTGFRDQDVITLQRVLDEEFELEKENLIKQQREKKEQAAKQAGLQRKRMMLERQLKEEKAEIEKDHRVEFWLSLV 438
            D D+ M D  + L D  DP+              A ++ DAS LQAPNANDFSNARLIEELE R  R +GFRDQDV+TLQ++LD EFELEKE++IK QREK+EQAAKQAGLQRKRMMLERQL+EE +EI KD R+EFWL LV
Sbjct:    3 DNDAFMEDYGDSLNDAGDPYEPKTT-------RNAAEALDAS-LQAPNANDFSNARLIEELENRNSRVSGFRDQDVVTLQKILDAEFELEKESIIKHQREKREQAAKQAGLQRKRMMLERQLREEISEIGKDQRIEFWLHLV 136          
BLAST of mRNA_S-ischiensis_contig109.1942.1 vs. uniprot
Match: A0A7R9VZE3_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VZE3_9STRA)

HSP 1 Score: 150 bits (379), Expect = 1.100e-38
Identity = 97/267 (36.33%), Postives = 140/267 (52.43%), Query Frame = 1
Query:  154 NANDFSNARLIEELETRKMRPTGFRDQDVITLQRVLDEEFELEKENLIKQQREKKEQAAKQAGLQRKRMMLERQLKEEKAEIEKDHRVEFWLSLVKQNATPPAARIEVNSITARALAKSMWTNSSLTCLDLSRTGLDDFAGAYVARLLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLTRIRQGEDTSGFTAFAAMLEANKTLTSVNLWRCALGPQAGAALAKGMESNHYLTFLETGHNGLTLMDQQSLTAKL 954
            +AN  +   L++ELE R ++  GF   D   LQ   DEE EL  E   +++RE +E  AK+A  QR+R+++E +++EE+ EI +D R++ WL L ++   PP +RIEVN+I+AR+LAK++ T+SS+ CLD+S  GL D AGAY+ R L+                                          LT   +  D SG  A A ML  NK L  ++LWRC  G  +G A+A  M  N  LT +E G+NG        + AKL
Sbjct:   49 DANALTLNELVQELEKRGLQARGFFADDAKVLQEKFDEEHELYVEAKRREKREAREADAKRAAEQRRRLLMETEVREEREEIGRDRRMKSWLLLTEEGMAPPHSRIEVNNISARSLAKALLTDSSILCLDVSNLGLSDLAGAYLCRALRSNRTLIKIELGSNKFGPKTCKSLGDALTSNNVVRFVSLESNPLTG--EKNDISGIIAIAEMLSKNKALRYLSLWRCGTGADSGKAIADAMAFNDALTCIEVGYNGWENSHTSHVAAKL 313          
BLAST of mRNA_S-ischiensis_contig109.1942.1 vs. uniprot
Match: A0A482S097_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S097_9ARCH)

HSP 1 Score: 141 bits (356), Expect = 3.030e-35
Identity = 136/290 (46.90%), Postives = 191/290 (65.86%), Query Frame = 1
Query:  247 LQRVLDEEFELEKENLIKQQREKKEQAAKQAGLQRKRMMLERQLKEEKAEIEKDHRVEFWLSLVKQNATPPAARIEVNSITARALAKSMWTNSSLTCLDLSRTGLDDFAGAYVARLLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLTRIRQGEDTSGFTAFAAMLEANKTLTSVNLWRCALGPQAGAALAKGMESNHYLTFLETGHNGLTLMDQQSLTAKLEDNVRRFEEQAALKREEQAAADKVVLEQKTIQEQLRKERALREWLEEQKQLRAE 1116
            LQR  +EEF+ E E    ++RE+  + A+Q GL+++R+ +ER L+EE+ E+ ++H++   + ++K+N    + RI V S++AR+LAK+MW N ++TCLDLS   L D AG Y+AR+LK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    I    D SG T+ A  L+ NKT+TS+NLWR  +    G  LA  +E N  L F +TGHN + + D + +T KL+ N+ +FE    ++R  +    +          Q  KE  L++WLEE++  R+E
Sbjct:    2 LQRAFEEEFKSELEQRRAKRREQLRKDAQQRGLRQRRLDMERSLQEEQDELARNHQIGMMIDMIKENMMGTSLRINVTSVSARSLAKAMWINDTITCLDLSSNDLSDHAGCYLARILKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP---IASESDLSGLTSLANALKMNKTITSLNLWRTNIPEAGGNILASALEVNETLLFCDTGHNFIEIGDVKKITDKLDANLAQFEANERVRRRHEEVRGQQRXXXXXXXSQRSKEVELKKWLEERRDHRSE 288          
BLAST of mRNA_S-ischiensis_contig109.1942.1 vs. uniprot
Match: A0A7S3GWT9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GWT9_9STRA)

HSP 1 Score: 133 bits (335), Expect = 5.810e-33
Identity = 125/237 (52.74%), Postives = 168/237 (70.89%), Query Frame = 1
Query:  124 SFDASQLQAPNANDFSNARLIEELETRKMRPTGFRDQDVITLQRVLDEEFELEKENLIKQQREKKEQAAKQAGLQRKRMMLERQLKEEKAEIEKDHRVEFWLSLVKQNATPPAARIEVNSITARALAKSMWTNSSLTCLDLSRTGLDDFAGAYVARLLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLTRIRQGEDTSGFTAFAAMLEANKTLTSVNLWRCAL 834
            SF  +Q     +ND     +  EL+ R ++ TGF D D   LQRV DEEF+ + E++  +++EK+ +AA+Q GLQR+RM++E+ L+EE+ E+ K+H++   +  +K NAT  + RIEVNS++AR+LAK+MW N ++TCLDLS   L+D AG Y+     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQ+      +D +G  A A  +  N TLTS+NLWRC +
Sbjct:   35 SFRPAQASLLTSND-----IYYELDKRSLKTTGFPDTDREILQRVFDEEFKADLEDMRARRKEKQRKAAQQLGLQRRRMLMEKTLQEEQDELAKNHQIGLMIEHIKDNATTTSLRIEVNSVSARSLAKAMWVNDTITCLDLSSIDLNDHAGCYLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQIATY---QDMNGLKALADGIRINTTLTSLNLWRCGI 263          
BLAST of mRNA_S-ischiensis_contig109.1942.1 vs. uniprot
Match: B8C189_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C189_THAPS)

HSP 1 Score: 109 bits (273), Expect = 2.230e-23
Identity = 80/272 (29.41%), Postives = 130/272 (47.79%), Query Frame = 1
Query:  154 NANDFSNARLIEELETRKMRPTGFRDQDVITLQRVLDEEFELEKENLIKQQREK----KEQAAKQAGLQRKRMMLERQLKEEKAEIEKDHRVEFWLSLVKQNATPPAARIEVNSITARALAKSMWTNSSLTCLDLSRTGLDDFAGAYVARLLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLTRIRQGEDTSG-FTAFAAMLEANKTLTSVNLWRCALGPQAGAALAKGMESNHYLTFLETGHNGLTLMDQQSLTAKL 954
            +A   +   ++ ELE + ++P GF   D   +QR  D+E E      +K +R +    K   AKQ   +RK  +LE+++ +EK  I  D ++  W +L+   + P   RI++N I++RALAK++W+NS +  LD+S   L D AGAY++R L+                                          L +    +DT    + F++ LE+N  LTS++LWRC LG +AG  L+  +  N  L  +E G+N     D   +T +L
Sbjct:   82 DATSLTLTDILTELERKGIQPIGFYSDDAKRVQRCFDQEHE----EYVKDKRNEALAAKVYEAKQQAERRKAALLEQEIVDEKKAISNDLQLLSWFNLLSTQSCPRHCRIDINDISSRALAKALWSNSRIQSLDVSNMHLSDLAGAYLSRSLQNNICLVKLELGGNAFGSKTLRSLADSLFVNRTLQFLSLESNPLAK----DDTRECISLFSSALESNTRLTSLSLWRCGLGLEAGRMLSNSISKNSSLIIVEVGYNTFDSSDINIMTKQL 345          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig109.1942.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
D8LBF3_ECTSI1.830e-11056.29Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A835YIK2_9STRA4.010e-9560.26Leucine rich repeat protein n=1 Tax=Tribonema minu... [more]
A0A7S3XPA2_HETAK3.060e-4746.79Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
F0Y577_AURAN1.370e-4546.81F-box domain-containing protein n=1 Tax=Aureococcu... [more]
A0A7S3ZT07_9STRA2.670e-4246.28Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A6H5JI07_9PHAE3.070e-4264.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7R9VZE3_9STRA1.100e-3836.33Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A482S097_9ARCH3.030e-3546.90Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A7S3GWT9_9STRA5.810e-3352.74Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
B8C189_THAPS2.230e-2329.41Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig109contigS-ischiensis_contig109:85593..88071 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score338.6
Seed ortholog evalue3.8e-90
Seed eggNOG ortholog2880.D8LBF3
KEGG koko:K17576
EggNOG free text desc.interleukin-8 biosynthetic process
EggNOG OGsKOG4308@1,KOG4308@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01009
Hectar predicted targeting categoryother localisation
Exons4
Model size1146
Cds size1146
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig109.1942.1prot_S-ischiensis_contig109.1942.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig109 85593..88071 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815574.4691508-CDS-S-ischiensis_contig109:85592..857841622815574.4691508-CDS-S-ischiensis_contig109:85592..85784Schizocladia ischiensis KU_0333CDSS-ischiensis_contig109 85593..85784 +
1695739779.287357-CDS-S-ischiensis_contig109:85592..857841695739779.287357-CDS-S-ischiensis_contig109:85592..85784Schizocladia ischiensis KU_0333CDSS-ischiensis_contig109 85593..85784 +
1622815574.4816346-CDS-S-ischiensis_contig109:85901..861441622815574.4816346-CDS-S-ischiensis_contig109:85901..86144Schizocladia ischiensis KU_0333CDSS-ischiensis_contig109 85902..86144 +
1695739779.2970762-CDS-S-ischiensis_contig109:85901..861441695739779.2970762-CDS-S-ischiensis_contig109:85901..86144Schizocladia ischiensis KU_0333CDSS-ischiensis_contig109 85902..86144 +
1622815574.4919436-CDS-S-ischiensis_contig109:86345..869331622815574.4919436-CDS-S-ischiensis_contig109:86345..86933Schizocladia ischiensis KU_0333CDSS-ischiensis_contig109 86346..86933 +
1695739779.3055596-CDS-S-ischiensis_contig109:86345..869331695739779.3055596-CDS-S-ischiensis_contig109:86345..86933Schizocladia ischiensis KU_0333CDSS-ischiensis_contig109 86346..86933 +
1622815574.5086777-CDS-S-ischiensis_contig109:87948..880711622815574.5086777-CDS-S-ischiensis_contig109:87948..88071Schizocladia ischiensis KU_0333CDSS-ischiensis_contig109 87949..88071 +
1695739779.314519-CDS-S-ischiensis_contig109:87948..880711695739779.314519-CDS-S-ischiensis_contig109:87948..88071Schizocladia ischiensis KU_0333CDSS-ischiensis_contig109 87949..88071 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig109.1942.1

>prot_S-ischiensis_contig109.1942.1 ID=prot_S-ischiensis_contig109.1942.1|Name=mRNA_S-ischiensis_contig109.1942.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=382bp
MALDDVDSLMRDLDNVLIDDQDPHRAFDLGGGGVGGEGAPDSFDASQLQA
PNANDFSNARLIEELETRKMRPTGFRDQDVITLQRVLDEEFELEKENLIK
QQREKKEQAAKQAGLQRKRMMLERQLKEEKAEIEKDHRVEFWLSLVKQNA
TPPAARIEVNSITARALAKSMWTNSSLTCLDLSRTGLDDFAGAYVARLLK
RNSTLIKMDLEANHLGPKACWAFGESLRSNTTLTSLSLESNQLTRIRQGE
DTSGFTAFAAMLEANKTLTSVNLWRCALGPQAGAALAKGMESNHYLTFLE
TGHNGLTLMDQQSLTAKLEDNVRRFEEQAALKREEQAAADKVVLEQKTIQ
EQLRKERALREWLEEQKQLRAEERRQEQEKR*
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mRNA from alignment at S-ischiensis_contig109:85593..88071+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig109.1942.1 ID=mRNA_S-ischiensis_contig109.1942.1|Name=mRNA_S-ischiensis_contig109.1942.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=2479bp|location=Sequence derived from alignment at S-ischiensis_contig109:85593..88071+ (Schizocladia ischiensis KU_0333)
ATGGCGCTCGACGACGTGGATAGCCTCATGAGAGACCTGGACAATGTCCT CATCGATGACCAAGACCCTCACCGGGCCTTTGACCTGGGTGGGGGCGGGG TTGGAGGCGAGGGCGCCCCGGACTCATTTGACGCATCTCAGCTGCAAGCG CCAAATGCAAACGACTTCTCGAACGCCCGGCTCATTGAAGAGGTAAGAAG ACGAGTCGTTTCAGAGTACTCGTAATGCCCAGTTGTCTCTGTCCGACTGC CGTTCGCTTGGTGAAGGACGGGAATGGCTCACGACAACCCGCTTCTCCCC CGACTGCAGCTGGAAACGCGGAAAATGCGGCCGACAGGGTTCAGGGACCA GGACGTGATCACGCTACAGAGGGTCCTGGACGAGGAGTTTGAACTAGAAA AGGAAAATCTCATCAAACAACAACGTGAGAAAAAGGAGCAAGCCGCCAAG CAAGCTGGTCTTCAGCGCAAGCGAATGATGCTCGAGAGGCAGCTCAAGGA GGAAAAGGCGGAAATCGAGAAAGATCATCGGGTGGAGTTCTGGCTGTCTC TGGTGAGTGCGTCTGTGCGAAGATAGCAGCATCGTCTATCGCGCGCACGC GCAGCCAAACACAGGGAAGCACGAGAAGAGGCACATTGCTCCTCAAAACG CTGTGTACTCTCAGCTCAATTCAAGTTACCCCGACCTGTATCTGGAGTGA AAGTTGAACACCCACTCGCCGCCACGTTTGCGTGTCTCGCACCGTTATCC CAGGTGAAGCAGAACGCCACGCCTCCAGCGGCTCGCATTGAGGTGAACTC AATCACTGCGCGAGCCTTGGCCAAGTCTATGTGGACCAACTCCTCGCTCA CGTGCCTGGACCTGTCTCGCACTGGCCTCGATGACTTTGCCGGGGCCTAC GTTGCGCGGCTGCTCAAGCGAAACAGCACCCTCATCAAGATGGATCTGGA GGCGAATCACCTGGGACCCAAAGCGTGCTGGGCATTCGGGGAGTCGCTGC GTTCCAATACCACGCTCACCAGCCTCAGCCTGGAGTCCAATCAGCTCACA CGGATTCGCCAAGGGGAGGACACCTCTGGGTTCACCGCCTTTGCGGCAAT GCTGGAGGCGAACAAGACGTTAACCTCGGTGAATCTGTGGCGGTGTGCCC TGGGCCCTCAAGCCGGCGCGGCGCTCGCCAAGGGCATGGAGAGCAACCAC TACTTGACCTTCTTGGAGACTGGGCACAATGGCCTCACCTTGATGGATCA GCAGAGTCTCACGGCCAAACTGGAGGACAATGTGCGGCGCTTTGAGGAGC AGGCCGCGCTCAAGAGGGAGGAGCAGGCGGCGGCGGACAAGGTCAGTGCA CCCCTGCCTACCGTCCTCCCAAGTGTAGGTATGGGTCAGTCTGTGCAGTA CGGTCCCCAAGCGGTACTCGTGTATTAATCGTACTCTACTCGACGAGTGT GATTGGCAGGCTTGGCGGATTATAGGGCTACTGAGCCCACCCAACTCCCT GTAGTTTGCCGCGGTTTATATAAGTACTAGTACATGCACCACGCTGTGCT TGCCGTAGTCCCAAGACCATTGACCCCGCGCCTGTATCGAGATGGCACAG TACTTGGTGAAAATCTGTATTGCATGTGCAGGCGATGACACCTGGTAGGC CTTCCTTCATGAAGCACTACAGTACTTCACGATTTACGAGCACTCATCGT AGTGAACCAAGTACAGTAGCTCTTGCTGTCCCATGCAGGGTAACTTTATC TTTACGCTGTAGGCTAGCAAACCGCATACTTCGAAGTACTTCGAAGTACT ACAGTACTACACTACTACTATAGTACTCGTATCGAACAGCTAGCTACCCC ATCCCGTACATGCCTCCAGTCGTCGGGCCCGTCGACAGACCCCCCAAGGG TGCCGTTTCGGCCAGTGGCCCGCCGATCGGCCCCCACAGGGCAGCCTTTC GGCCATTGGTCTCGCATCTCTACACTACTAGGCCGGGACGGAGCATACCA GGTTCTCACCGGACAGGCGTGAGTTGCACACCAACCCCGGCTTGCCATCC CCCCCCCCGATAAGTACTGGAAGTATGAAGTACTTGAACTAGTTGTATTG ATTACTTCGAAAGTGCATAGTACACACACTTGTATGGTAGAAGTAGTGTG GAGTGACACTTGTACTGTAGTGTGAGTATGTACTACAATGTGATGTCTGC ATGCGAATACGCATTGATTGACGGGTGTGGAGTGTCACCGCTAAACCCGG TGGTGTTGAAATACCTTTTACTTCGAAGTATTGAAGAGGACTGGCACAAG CCATCCAGGAGCAAGACTTGAGCGTATGATACCCTCCTATGTACGTACAA TGGCAGGTGGTGTTGGAGCAGAAGACAATACAGGAGCAGCTTCGCAAGGA GAGGGCCTTGAGAGAGTGGCTAGAGGAACAGAAGCAATTAAGGGCGGAGG AGCGGCGACAGGAGCAGGAGAAGAGGTGA
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Coding sequence (CDS) from alignment at S-ischiensis_contig109:85593..88071+

>mRNA_S-ischiensis_contig109.1942.1 ID=mRNA_S-ischiensis_contig109.1942.1|Name=mRNA_S-ischiensis_contig109.1942.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=2292bp|location=Sequence derived from alignment at S-ischiensis_contig109:85593..88071+ (Schizocladia ischiensis KU_0333)
ATGGCGCTCGACGACGTGGATAGCCTCATGAGAGACCTGGACAATGTCCT
CATCGATGACCAAGACCCTCACCGGGCCTTTGACCTGGGTGGGGGCGGGG
TTGGAGGCGAGGGCGCCCCGGACTCATTTGACGCATCTCAGCTGCAAGCG
CCAAATGCAAACGACTTCTCGAACGCCCGGCTCATTGAAGAGATGGCGCT
CGACGACGTGGATAGCCTCATGAGAGACCTGGACAATGTCCTCATCGATG
ACCAAGACCCTCACCGGGCCTTTGACCTGGGTGGGGGCGGGGTTGGAGGC
GAGGGCGCCCCGGACTCATTTGACGCATCTCAGCTGCAAGCGCCAAATGC
AAACGACTTCTCGAACGCCCGGCTCATTGAAGAGCTGGAAACGCGGAAAA
TGCGGCCGACAGGGTTCAGGGACCAGGACGTGATCACGCTACAGAGGGTC
CTGGACGAGGAGTTTGAACTAGAAAAGGAAAATCTCATCAAACAACAACG
TGAGAAAAAGGAGCAAGCCGCCAAGCAAGCTGGTCTTCAGCGCAAGCGAA
TGATGCTCGAGAGGCAGCTCAAGGAGGAAAAGGCGGAAATCGAGAAAGAT
CATCGGGTGGAGTTCTGGCTGTCTCTGCTGGAAACGCGGAAAATGCGGCC
GACAGGGTTCAGGGACCAGGACGTGATCACGCTACAGAGGGTCCTGGACG
AGGAGTTTGAACTAGAAAAGGAAAATCTCATCAAACAACAACGTGAGAAA
AAGGAGCAAGCCGCCAAGCAAGCTGGTCTTCAGCGCAAGCGAATGATGCT
CGAGAGGCAGCTCAAGGAGGAAAAGGCGGAAATCGAGAAAGATCATCGGG
TGGAGTTCTGGCTGTCTCTGGTGAAGCAGAACGCCACGCCTCCAGCGGCT
CGCATTGAGGTGAACTCAATCACTGCGCGAGCCTTGGCCAAGTCTATGTG
GACCAACTCCTCGCTCACGTGCCTGGACCTGTCTCGCACTGGCCTCGATG
ACTTTGCCGGGGCCTACGTTGCGCGGCTGCTCAAGCGAAACAGCACCCTC
ATCAAGATGGATCTGGAGGCGAATCACCTGGGACCCAAAGCGTGCTGGGC
ATTCGGGGAGTCGCTGCGTTCCAATACCACGCTCACCAGCCTCAGCCTGG
AGTCCAATCAGCTCACACGGATTCGCCAAGGGGAGGACACCTCTGGGTTC
ACCGCCTTTGCGGCAATGCTGGAGGCGAACAAGACGTTAACCTCGGTGAA
TCTGTGGCGGTGTGCCCTGGGCCCTCAAGCCGGCGCGGCGCTCGCCAAGG
GCATGGAGAGCAACCACTACTTGACCTTCTTGGAGACTGGGCACAATGGC
CTCACCTTGATGGATCAGCAGAGTCTCACGGCCAAACTGGAGGACAATGT
GCGGCGCTTTGAGGAGCAGGCCGCGCTCAAGAGGGAGGAGCAGGCGGCGG
CGGACAAGGTGAAGCAGAACGCCACGCCTCCAGCGGCTCGCATTGAGGTG
AACTCAATCACTGCGCGAGCCTTGGCCAAGTCTATGTGGACCAACTCCTC
GCTCACGTGCCTGGACCTGTCTCGCACTGGCCTCGATGACTTTGCCGGGG
CCTACGTTGCGCGGCTGCTCAAGCGAAACAGCACCCTCATCAAGATGGAT
CTGGAGGCGAATCACCTGGGACCCAAAGCGTGCTGGGCATTCGGGGAGTC
GCTGCGTTCCAATACCACGCTCACCAGCCTCAGCCTGGAGTCCAATCAGC
TCACACGGATTCGCCAAGGGGAGGACACCTCTGGGTTCACCGCCTTTGCG
GCAATGCTGGAGGCGAACAAGACGTTAACCTCGGTGAATCTGTGGCGGTG
TGCCCTGGGCCCTCAAGCCGGCGCGGCGCTCGCCAAGGGCATGGAGAGCA
ACCACTACTTGACCTTCTTGGAGACTGGGCACAATGGCCTCACCTTGATG
GATCAGCAGAGTCTCACGGCCAAACTGGAGGACAATGTGCGGCGCTTTGA
GGAGCAGGCCGCGCTCAAGAGGGAGGAGCAGGCGGCGGCGGACAAGGTGG
TGTTGGAGCAGAAGACAATACAGGAGCAGCTTCGCAAGGAGAGGGCCTTG
AGAGAGTGGCTAGAGGAACAGAAGCAATTAAGGGCGGAGGAGCGGCGACA
GGAGCAGGAGAAGAGGTGAGTGGTGTTGGAGCAGAAGACAATACAGGAGC
AGCTTCGCAAGGAGAGGGCCTTGAGAGAGTGGCTAGAGGAACAGAAGCAA
TTAAGGGCGGAGGAGCGGCGACAGGAGCAGGAGAAGAGGTGA
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