prot_S-ischiensis_contig8.19595.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig8.19595.1
Unique Nameprot_S-ischiensis_contig8.19595.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length316
Homology
BLAST of mRNA_S-ischiensis_contig8.19595.1 vs. uniprot
Match: A0A6H5L397_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L397_9PHAE)

HSP 1 Score: 101 bits (252), Expect = 3.700e-20
Identity = 50/91 (54.95%), Postives = 71/91 (78.02%), Query Frame = 0
Query:   39 LDTGAGPREFWEAVSDGPRFADPAWNVDLQALEESMWRLALLVR------HQDRRRGIRLMRGELLRRVLDLRLYELVLLYLRTCLVWEGI 123
            LD+GAGPR+FWE V+ GPR  + +WNVD++ALE+ +W LA+LVR      H +R +G+ L R ELLRR LD+R++E++LLY+RT L+W+GI
Sbjct:  839 LDSGAGPRKFWETVA-GPRLVEASWNVDIKALEQQLWDLAMLVRGPDLRGHCERHQGLALNRCELLRRTLDVRVFEVLLLYMRTRLIWDGI 928          
BLAST of mRNA_S-ischiensis_contig8.19595.1 vs. uniprot
Match: A0A7S1XZU6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XZU6_9STRA)

HSP 1 Score: 74.3 bits (181), Expect = 2.270e-12
Identity = 42/86 (48.84%), Postives = 55/86 (63.95%), Query Frame = 0
Query:   38 FLDTGAGPREFWEAVSDGPRFADPAWNVDLQALEESMWRLALLVRHQDRRRGIRLMRGELLRRVLDLRLYELVLLYLRTCLVWEGI 123
            FLD+GAGPREFW AV+   +      ++ +  LE+ MWRL LLVR Q+R +G+RL R E  RR+LD RLYE  L  L   LV+  +
Sbjct:   69 FLDSGAGPREFWMAVTPALKVG----SMSIVELEQQMWRLVLLVRCQEREKGLRLDRNEAQRRLLDFRLYEYALEMLLKFLVYNDV 150          
BLAST of mRNA_S-ischiensis_contig8.19595.1 vs. uniprot
Match: A0A7S2SEX3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SEX3_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 2.420e-12
Identity = 44/87 (50.57%), Postives = 60/87 (68.97%), Query Frame = 0
Query:   38 FLDTGAGPREFWEAVSDGPRFADP---AWNVDLQALEESMWRLALLVRHQDRRRGIRLMRGELLRRVLDLRLYELVLLYLRTCLVWE 121
            F+DTGAGP+EFW+ ++  P+  D          + LE  MWRL LLVR QDR++G+RL R E  R++LD+R+YEL+LLY+R  LV E
Sbjct:  438 FIDTGAGPKEFWQNIN--PKKNDTFRGKGTPSAEKLEAHMWRLVLLVRCQDRKKGLRLARHESQRKLLDMRIYELLLLYMRQELVEE 522          
BLAST of mRNA_S-ischiensis_contig8.19595.1 vs. uniprot
Match: A0A7R9UDJ3_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UDJ3_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 2.920e-12
Identity = 43/86 (50.00%), Postives = 58/86 (67.44%), Query Frame = 0
Query:   38 FLDTGAGPREFWEAVSDGPRFADPAWNVDLQALEESMWRLALLVRHQDRRRGIRLMRGELLRRVLDLRLYELVLLYLRTCLVWEGI 123
            FLDTGAGPREFW A++   +      +  L  LE+ MWRL LLVR QDR +G++L R E +RR+LD RL E VL+ L+  LV++ +
Sbjct:  901 FLDTGAGPREFWMAITPPLKIR----SFSLAELEQMMWRLVLLVRCQDREKGLKLFRAEAMRRLLDSRLAEYVLVMLQKSLVYKDL 982          
BLAST of mRNA_S-ischiensis_contig8.19595.1 vs. uniprot
Match: A0A836CC54_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC54_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 7.460e-12
Identity = 50/117 (42.74%), Postives = 62/117 (52.99%), Query Frame = 0
Query:   36 ALFLDTGAGPREFWEAVSDGPRFADPAWNVDLQALEESMWRLALLVRHQDRRRGIRLMRG----------------------------ELLRRVLDLRLYELVLLYLRTCLVWEGIG 124
            A  LDTGAGPR  W+A+  G RFA  AW+VDL  LE  +WRLALLVR Q    G  L++G                               RR+LD R++EL+LLY RT +V EG+G
Sbjct:  829 AALLDTGAGPRALWQALR-GERFAQGAWDVDLDRLEAHLWRLALLVRRQGAGDGAPLLQGGGSDLXXXXXXXXXXXXXXGNGLDLRRASAHRRLLDARVHELLLLYARTVIVNEGLG 944          
BLAST of mRNA_S-ischiensis_contig8.19595.1 vs. uniprot
Match: D7FQ57_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ57_ECTSI)

HSP 1 Score: 68.9 bits (167), Expect = 3.340e-9
Identity = 32/53 (60.38%), Postives = 42/53 (79.25%), Query Frame = 0
Query:   39 LDTGAGPREFWEAVSDGPRFADPAWNVDLQALEESMWRLALLVRHQDRRRGIR 91
            LD+GAGPR+FWEAV+ GPR  + +WNVD++ALE+ +W LA+LVR  D RR  R
Sbjct:  944 LDSGAGPRKFWEAVA-GPRLVEASWNVDIKALEQQLWDLAMLVRGPDLRRPSR 995          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig8.19595.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5L397_9PHAE3.700e-2054.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S1XZU6_9STRA2.270e-1248.84Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A7S2SEX3_9STRA2.420e-1250.57Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7R9UDJ3_9STRA2.920e-1250.00Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A836CC54_9STRA7.460e-1242.74Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7FQ57_ECTSI3.340e-960.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006311Twin-arginine translocation pathway, signal sequencePROSITEPS51318TATcoord: 1..36
score: 8.041

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig8contigS-ischiensis_contig8:2399517..2401436 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig8.19595.1mRNA_S-ischiensis_contig8.19595.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig8 2398319..2401889 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig8.19595.1 ID=prot_S-ischiensis_contig8.19595.1|Name=mRNA_S-ischiensis_contig8.19595.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=316bp
MIDPGRRRRRALAGGHGGGGTGTAASAAGVGAAASALFLDTGAGPREFWE
AVSDGPRFADPAWNVDLQALEESMWRLALLVRHQDRRRGIRLMRGELLRR
VLDLRLYELVLLYLRTCLVWEGIGPSHSPGVRADHVALDTGAAAMGGKPR
PEGASAEEGSGSASVAEATSAAAAAAPGCWSCQSGACPCGLGIVASDADG
DGDGDGDRCCPECSGCCLLQSSSVAAAAAAASEGASDEALLAATERAIAA
APAALNHSFVPPAAAHAVAVAAAAASAAGSDCLSVGSARGGSLSEPGKWP
GRGCGGPGHSGRLGA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006311TAT_signal