prot_S-ischiensis_contig8.19337.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig8.19337.1
Unique Nameprot_S-ischiensis_contig8.19337.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length475
Homology
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BLAST of mRNA_S-ischiensis_contig8.19337.1 vs. uniprot
Match: A0A6H5KXJ7_9PHAE (Nudix hydrolase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXJ7_9PHAE)

HSP 1 Score: 141 bits (356), Expect = 2.550e-32
Identity = 79/200 (39.50%), Postives = 115/200 (57.50%), Query Frame = 0 
Query:  177 PGPKVLVGAGFTPPKVQAVRGGG-------SGDGRG----------PAQTVSENYVDSWVRAPETETYRTTVLIPYRFDPATGQAVVLLGTEMRKARGAETLVLSALGGKRESYDVGPQHTAWREFWGQSGQVIGPEDADAFHSRYDAGEATVLWVKP-KMLVFVCEVDSPGVAWLPELYARSGRGVDKSETSMLRLHWV 358
            PG +   G G  P       GGG        G GRG          P  +++ +Y+D +VR  E + Y++  ++PYR DP++G+  VL+G+E+RK +    LV+S LGGKRE  D GP+HTAWREFW +SG+V+G ++   F +    G A  +W++  KM V  CE+ SP +  LP  +   G GVDK +TSM+ LHW+
Sbjct:  586 PGARPGDGLGVGPQLQNGASGGGWVGEAAGVGGGRGQPMPHWRQNAPINSLAPDYLDYFVRERERQYYKSAGILPYRRDPSSGEVWVLVGSEIRKNK----LVVSCLGGKREDSDAGPEHTAWREFWEESGKVLGDDERANFLTTCFEGRARAMWIQSAKMAVIACELGSPDLVSLPRRFGLGGPGVDKRDTSMIALHWI 781
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BLAST of mRNA_S-ischiensis_contig8.19337.1 vs. uniprot
Match: D8LSB6_ECTSI (Nudix hydrolase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSB6_ECTSI)

HSP 1 Score: 137 bits (346), Expect = 2.860e-31
Identity = 72/171 (42.11%), Postives = 106/171 (61.99%), Query Frame = 0 
Query:  199 GSGDGRG----------PAQTVSENYVDSWVRAPETETYRTTVLIPYRFDPATGQAVVLLGTEMRKARGAETLVLSALGGKRESYDVGPQHTAWREFWGQSGQVIGPEDADAFHSRYDAGEATVLWVKP-KMLVFVCEVDSPGVAWLPELYARSGRGVDKSETSMLRLHWV 358
            G G GRG          P  +++ +Y+D +VR  E + Y++  ++PYR DP++G+  VL+G+E+RK +    LV+S LGGKRE  D GP+HTAWREFW +SG+V+G ++   F +    G A  +W++  KM V  CE+ SP +  LP  +     GVDK +TSM+ LHWV
Sbjct:  343 GVGGGRGQPMPHWRQNVPINSLAPDYLDYFVRERERQYYKSAGILPYRRDPSSGEVWVLVGSEIRKNK----LVVSCLGGKREDSDAGPEHTAWREFWEESGKVLGDDERANFLTTCFEGRARAMWMQSAKMAVIACELGSPDLVSLPRRFGLGDPGVDKRDTSMIALHWV 509
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig8.19337.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KXJ7_9PHAE2.550e-3239.50Nudix hydrolase domain-containing protein n=1 Tax=... [more]
D8LSB6_ECTSI2.860e-3142.11Nudix hydrolase domain-containing protein n=1 Tax=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 386..404
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 405..474
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..385

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig8contigS-ischiensis_contig8:787773..792503 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig8.19337.1mRNA_S-ischiensis_contig8.19337.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig8 787760..792614 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig8.19337.1 ID=prot_S-ischiensis_contig8.19337.1|Name=mRNA_S-ischiensis_contig8.19337.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=475bp
MDEERGREGWGGQFGGPWQGGENLGQRSGPPGPSGPPRPHPNFGGPSLHE
AVGGAQNPLQHHPDGLGAMHHARSGSQGSGAFVSWGPQAQGAFWPGAPPP
GNPEPGPSEPRTKGKRKTVKRKRKKDSDVYGTGDARGTTDVGGANGGIGG
GLGRPVTEGGGRPWDLDQSGGQVRKDPGPKVLVGAGFTPPKVQAVRGGGS
GDGRGPAQTVSENYVDSWVRAPETETYRTTVLIPYRFDPATGQAVVLLGT
EMRKARGAETLVLSALGGKRESYDVGPQHTAWREFWGQSGQVIGPEDADA
FHSRYDAGEATVLWVKPKMLVFVCEVDSPGVAWLPELYARSGRGVDKSET
SMLRLHWVPVDGACPARPPPPPHSPRPRPLPARDQWRTLFFVLFRFSLFL
FPFFRGGAPPAAGLAAPLSIRLLPTCLSASQSLLAVVQSVRPCVSSPSSS
SPPSTPSAPYVRQRARACCLEGWC*
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