mRNA_S-ischiensis_contig79.19167.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig79.19167.1 vs. uniprot
Match: D7FJ06_ECTSI (Epimerase/dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ06_ECTSI) HSP 1 Score: 342 bits (876), Expect = 5.000e-116 Identity = 178/244 (72.95%), Postives = 209/244 (85.66%), Query Frame = 1
Query: 4 GHARSRLGHASAGDVRMAYGKVFVAGGSKGVGRAIVDKLVEQGSEVVALVRREDAKAELEQLPGVTAVLADALEIKAVEGALDGCDAAITTLGGAPEGDETQRVDYAGNRNVIESAGILGVTRVVLVTSVGCGSSREAISDDVYQVLKKALDAKTKAENMLIKYYTNSDWTIIRPGGLISEPPTGKSVLTKDTTAAGVIHRGDVADLVVKVLNSDATIKGIFTAVDPTIKNQYSSEREVAAFQL 735
G ARS + S G +RMAYGKVFVAGG+KGVGRA++DKLV+QGSEVVALVRREDAK ELE + GV+AV+ DAL++K VE LDGCDAAITTLGGAPEGDE++RVDYAGNRNVIESAGILG+TRVV+VTSVGCGSSREAISD VYQVL+KAL AKT AENML+KYYTNS+WTIIRPGGL S+ TG ++LT+DT AAGVI+R DVADL V+ LNS +T++ I TAVDP +++ Y S + AAF L
Sbjct: 31 GTARSTISGQSTG-LRMAYGKVFVAGGAKGVGRAVIDKLVDQGSEVVALVRREDAKDELEAIKGVSAVVCDALDLKGVEAVLDGCDAAITTLGGAPEGDESKRVDYAGNRNVIESAGILGITRVVMVTSVGCGSSREAISDQVYQVLEKALKAKTLAENMLLKYYTNSEWTIIRPGGLKSDAATGTAILTEDTKAAGVINRADVADLAVQALNSPSTVRKILTAVDPAVQSSYDSAEKPAAFAL 273
BLAST of mRNA_S-ischiensis_contig79.19167.1 vs. uniprot
Match: A0A835Z825_9STRA (Epimerase/dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z825_9STRA) HSP 1 Score: 281 bits (719), Expect = 2.470e-92 Identity = 150/234 (64.10%), Postives = 181/234 (77.35%), Query Frame = 1
Query: 34 SAGDVRMAYGKVFVAGGSKGVGRAIVDKLVEQGSEVVALVRREDAKAELEQLPGVTAVLADALEIKAVEGALDGCDAAITTLGGAPEGDETQRVDYAGNRNVIESAGILGVTRVVLVTSVGCGSSREAISDDVYQVLKKALDAKTKAENMLIKYYTNSDWTIIRPGGLISEPPTGKSVLTKDTTAAGVIHRGDVADLVVKVLNSDATIKGIFTAVDPTIKNQYSSEREVAAFQL 735
S+ + MAY KVFVAGGS GVGR +V++LV +G +VVA+VRREDA EL + GVTAV+ DAL++K VEGALDGCDAAITTLGG+ RVDY GNRNVIESAGILGVTRV+LVTSVGCG SR AISD VY L+KAL AKTKAE ML KYYTN+ WTIIRPGGL + TGK++LT++ T AG+I R DVAD+VV+ L++D T K +FTAVDP+I + + + AF L
Sbjct: 32 SSSSLSMAYNKVFVAGGSSGVGREVVNQLVSKGKQVVAIVRREDALEELNAIEGVTAVMVDALDLKGVEGALDGCDAAITTLGGS---SGENRVDYEGNRNVIESAGILGVTRVILVTSVGCGDSRGAISDQVYTSLEKALVAKTKAEKMLQKYYTNAFWTIIRPGGLQTAEGTGKAILTENKTIAGIIRRADVADVVVRALDNDGTHKKVFTAVDPSIPSSFGDASKAEAFPL 262
BLAST of mRNA_S-ischiensis_contig79.19167.1 vs. uniprot
Match: B7FVE3_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FVE3_PHATC) HSP 1 Score: 279 bits (713), Expect = 2.380e-91 Identity = 149/227 (65.64%), Postives = 177/227 (77.97%), Query Frame = 1
Query: 55 AYGKVFVAGGSKGVGRAIVDKLVEQGSEVVALVRREDAKAELEQLPGVTAVLADALEIKAVEGALDGCDAAITTLGGAPEGDETQRVDYAGNRNVIESAGILGVTRVVLVTSVGCGSSREAISDDVYQVLKKALDAKTKAENMLIKYYTNSDWTIIRPGGLISEPPTGKSVLTKDTTAAGVIHRGDVADLVVKVLNSDATIKGIFTAVDPTIKNQYSSEREVAAFQL 735
AY KVFVAGG++GVGR IVD+L+ QGSEVVALVR EDA EL + GVTA+ DA E KAVE A+DGCDAAITTLGGA D +RVDY GN NVIESAGILGVTRV+LVTSVGCGSS+EA +V++ LK+ L AK KAEN+LIKYYTN +WTIIRPGGL SEP TGK++LT+DT A G IHR DVA L +K LNS T + + TA+DP+I + S ++V AF +
Sbjct: 42 AYKKVFVAGGTRGVGRCIVDQLLGQGSEVVALVRSEDALKELNAIEGVTAIRGDAFEQKAVENAMDGCDAAITTLGGATS-DGGKRVDYDGNSNVIESAGILGVTRVILVTSVGCGSSKEAAPPNVFEALKEVLTAKEKAENVLIKYYTNMNWTIIRPGGLKSEPATGKAILTEDTRAIGTIHREDVAALAIKALNSSNTERKVLTAIDPSIDSAVSDGKQVEAFAV 267
BLAST of mRNA_S-ischiensis_contig79.19167.1 vs. uniprot
Match: B8C036_THAPS (NAD(P)-bd_dom domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C036_THAPS) HSP 1 Score: 273 bits (698), Expect = 6.040e-89 Identity = 145/219 (66.21%), Postives = 172/219 (78.54%), Query Frame = 1
Query: 58 YGKVFVAGGSKGVGRAIVDKLVEQGSEVVALVRREDAKAELEQLPGVTAVLADALEIKAVEGALDGCDAAITTLGGAPEGDETQR-VDYAGNRNVIESAGILGVTRVVLVTSVGCGSSREAISDDVYQVLKKALDAKTKAENMLIKYYTNSDWTIIRPGGLISEPPTGKSVLTKDTTAAGVIHRGDVADLVVKVLNSDATIKGIFTAVDPTIKNQYSSE 711
Y KVFVAGGSKGVGR +VDKLV G+EVVALVR ++A EL L GVTA+ DA++ K VEGA+DGCDAAITTLGG E ++ VDY GN NVIE+AGILGVTRVVLVTS+GCGSS+EA VY+VLK L K KAE +L +YYTN +WTI+RPGGL+SEPPTGK+VLT+DT A G IHRGDVADLVVK L+S T K I +AVDP+I++ + E
Sbjct: 48 YKKVFVAGGSKGVGRLVVDKLVSNGAEVVALVRSDEAVDELSALDGVTAIKGDAMDYKTVEGAMDGCDAAITTLGGGHNVAEGEKYVDYVGNNNVIEAAGILGVTRVVLVTSIGCGSSKEATPPSVYEVLKDVLVQKEKAEKVLTRYYTNMNWTIVRPGGLVSEPPTGKAVLTEDTMAIGSIHRGDVADLVVKALSSKNTEKKILSAVDPSIESASNPE 266
BLAST of mRNA_S-ischiensis_contig79.19167.1 vs. uniprot
Match: A0A7S3L6R6_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L6R6_9STRA) HSP 1 Score: 270 bits (691), Expect = 4.540e-88 Identity = 140/226 (61.95%), Postives = 176/226 (77.88%), Query Frame = 1
Query: 58 YGKVFVAGGSKGVGRAIVDKLVEQGSEVVALVRREDAKAELEQLPGVTAVLADALEIKAVEGALDGCDAAITTLGGAPEGDETQRVDYAGNRNVIESAGILGVTRVVLVTSVGCGSSREAISDDVYQVLKKALDAKTKAENMLIKYYTNSDWTIIRPGGLISEPPTGKSVLTKDTTAAGVIHRGDVADLVVKVLNSDATIKGIFTAVDPTIKNQYSSEREVAAFQL 735
Y VFVAGGSKGVGR ++DKL+EQGS+VVALVR+E+ A+L + GVTA++ DA + K VE A+DGCDAAITTLGG+ + D R+DYAGN NVIESAGILGV R++LVTSVGCGSS+EA + V++ LK+ L AK KAEN+LIKYYTNS+W+IIRPGGL SEP TG ++LT+D G IHR DVA LVV+ L S T + I TA+DP+I++ ++ EV AF L
Sbjct: 39 YKNVFVAGGSKGVGRLVIDKLLEQGSKVVALVRKEEVAADLNSIEGVTAIVGDAFDQKTVENAMDGCDAAITTLGGSTQ-DTGARIDYAGNSNVIESAGILGVQRIILVTSVGCGSSKEAAPEAVFEALKEVLLAKEKAENVLIKYYTNSNWSIIRPGGLKSEPATGNAILTEDNKTIGTIHREDVASLVVRCLESPKTERKILTAIDPSIESAVATGAEVEAFAL 263
BLAST of mRNA_S-ischiensis_contig79.19167.1 vs. uniprot
Match: A0A7S2UDM5_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UDM5_9STRA) HSP 1 Score: 268 bits (686), Expect = 4.550e-87 Identity = 145/227 (63.88%), Postives = 173/227 (76.21%), Query Frame = 1
Query: 58 YGKVFVAGGSKGVGRAIVDKLVEQGSEVVALVRREDAKAELEQLPGVTAVLADALEIKAVEGALDGCDAAITTLGGAPEGDETQRVDYAGNRNVIESAGILGVTRVVLVTSVGCGSSREAISDDVYQVLKKALDAKTKAENMLIKYYTNSDWTIIRPGGLISEPPTGKSVLTKDTTAAGVIHRGDVADLVVKVLNSDATIKGIFTAVDPTIKNQYSSE-REVAAFQL 735
Y KVFVAGGSKGVGR +VDKLV G+ VVALVR E+A AEL L GVTAV+ DA + KAVEGA+DGCDAA++TLGG + QRVDY GN NVIE+AGILGVTRVVL+TS+GCGSS+EA V++VLK L AK +AEN+LIKYYTN++WTIIRPGGL SEP TGK++LT+D A G IHR DVA L ++ L S T + I +AVDP I + + E R V AF L
Sbjct: 53 YNKVFVAGGSKGVGRLVVDKLVGSGTGVVALVRSEEAAAELNALDGVTAVIGDAFDYKAVEGAMDGCDAAMSTLGGGTVEEGKQRVDYEGNSNVIEAAGILGVTRVVLITSIGCGSSKEAAPPSVFEVLKDVLSAKERAENILIKYYTNTNWTIIRPGGLKSEPATGKAILTEDNMAIGSIHREDVAALAIQALTSPKTKQKILSAVDPEITSAANVEGRVVEAFAL 279
BLAST of mRNA_S-ischiensis_contig79.19167.1 vs. uniprot
Match: A0A6U3NUE1_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3NUE1_9STRA) HSP 1 Score: 266 bits (681), Expect = 2.440e-86 Identity = 142/222 (63.96%), Postives = 170/222 (76.58%), Query Frame = 1
Query: 55 AYGKVFVAGGSKGVGRAIVDKLVEQGSEVVALVRREDAKAELEQLPGVTAVLADALEIKAVEGALDGCDAAITTLGGAPEGDETQRVDYAGNRNVIESAGILGVTRVVLVTSVGCGSSREAISDDVYQVLKKALDAKTKAENMLIKYYTNSDWTIIRPGGLISEPPTGKSVLTKDTTAAGVIHRGDVADLVVKVLNSDATIKGIFTAVDPTIKNQYSSEREV 720
AY KVFVAGGSKGVGR IVDKL+E GSEVVALVR ++A EL L GVTA+L DA E K VEGA+DGCDAAITTLG G++ +RVDY GN NVIE+AGILGVTRV+L+TS+GCGSS+EA V++VLK L AK +AEN+LIKYYTN +WTIIRPGGL SEP TG+++LT+D A G IHR DVA L VK L S T + + +AVD +I + + E V
Sbjct: 50 AYKKVFVAGGSKGVGRHIVDKLIEDGSEVVALVRSQEAIDELSALEGVTAILGDAFEYKNVEGAMDGCDAAITTLGQGTAGEDGKRVDYEGNSNVIEAAGILGVTRVILITSIGCGSSKEAAPPSVFEVLKDVLAAKERAENVLIKYYTNMNWTIIRPGGLKSEPGTGEAILTEDAMAIGSIHREDVAALAVKALTSSKTERKVLSAVDQSIPSASNVEGRV 271
BLAST of mRNA_S-ischiensis_contig79.19167.1 vs. uniprot
Match: A0A7S4AAV3_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AAV3_9STRA) HSP 1 Score: 265 bits (678), Expect = 9.010e-86 Identity = 140/227 (61.67%), Postives = 179/227 (78.85%), Query Frame = 1
Query: 58 YGKVFVAGGSKGVGRAIVDKLVEQGSEVVALVRREDAKAELEQLPGVTAVLADALEIKAVEGALDGCDAAITTLGGAPEGDETQRVDYAGNRNVIESAGILGVTRVVLVTSVGCGSSREAISDDVYQVLKKALDAKTKAENMLIKYYTNSDWTIIRPGGLISEPPTGKSVLTKDTTAAGVIHRGDVADLVVKVLNSDATIKGIFTAVDPTIKNQYSSE-REVAAFQL 735
Y KVFVAGGSKGVG AIV+KL +G+EVVALVR E++K EL + GVTA+L DA K VE A+DGCDAAITTLGG +RVDY GN NVIESAGILGV R++LVTSVGCGSS+ A +V+++LK L AK KAEN+LI++YTNS+W+IIRPGGL+SEP TGK++LT+DTTA G IHR DVADLV++ ++S T + + +AVDP+I +Q + + +E+ AF+L
Sbjct: 63 YKKVFVAGGSKGVGHAIVEKLSARGTEVVALVRSEESKTELNSMSGVTAILGDAFNQKDVENAMDGCDAAITTLGGTAA---DRRVDYEGNNNVIESAGILGVQRILLVTSVGCGSSKGAAPPNVFEILKDVLAAKEKAENVLIEWYTNSNWSIIRPGGLVSEPMTGKAILTEDTTAIGSIHREDVADLVIRAMDSPKTERVVLSAVDPSIASQVAVKGKEIPAFEL 286
BLAST of mRNA_S-ischiensis_contig79.19167.1 vs. uniprot
Match: A0A7S0AIJ9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AIJ9_9STRA) HSP 1 Score: 264 bits (674), Expect = 2.720e-85 Identity = 144/229 (62.88%), Postives = 173/229 (75.55%), Query Frame = 1
Query: 37 AGDVRMA--YGKVFVAGGSKGVGRAIVDKLVEQGSEVVALVRREDAKAELEQLPGVTAVLADALEIKAVEGALDGCDAAITTLGGA--PEGDETQRVDYAGNRNVIESAGILGVTRVVLVTSVGCGSSREAISDDVYQVLKKALDAKTKAENMLIKYYTNSDWTIIRPGGLISEPPTGKSVLTKDTTAAGVIHRGDVADLVVKVLNSDATIKGIFTAVDPTIKNQYSSE 711
AGD A Y KVFVAGGS+GVGRA+VD L+ GSEVVALVR ++A+AEL L GVT DA + KAVEGA+DGCDAAITT+G P G+ +RVDY GN NVIE+AGILGVTRVVLVTS+GCGSS+EA V++VLK L AK +AEN+LIKYYTN +WTI+RPGGL SEP TG ++LT++ A G IHR DVADLVV+ LNS T + I +AVDP I ++E
Sbjct: 48 AGDAAPASKYSKVFVAGGSRGVGRAVVDGLLSAGSEVVALVRTDEAEAELSALDGVTVARGDAFDYKAVEGAMDGCDAAITTMGQGTDPVGENGKRVDYVGNNNVIEAAGILGVTRVVLVTSIGCGSSKEAAPPSVFEVLKDVLAAKERAENVLIKYYTNMNWTIVRPGGLKSEPATGTAILTENNLAIGSIHREDVADLVVQALNSGNTERKILSAVDPEISASANAE 276
BLAST of mRNA_S-ischiensis_contig79.19167.1 vs. uniprot
Match: A0A7S2HK64_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HK64_9STRA) HSP 1 Score: 261 bits (668), Expect = 2.510e-84 Identity = 138/222 (62.16%), Postives = 169/222 (76.13%), Query Frame = 1
Query: 55 AYGKVFVAGGSKGVGRAIVDKLVEQGSEVVALVRREDAKAELEQLPGVTAVLADALEIKAVEGALDGCDAAITTLGGAPEGDETQRVDYAGNRNVIESAGILGVTRVVLVTSVGCGSSREAISDDVYQVLKKALDAKTKAENMLIKYYTNSDWTIIRPGGLISEPPTGKSVLTKDTTAAGVIHRGDVADLVVKVLNSDATIKGIFTAVDPTIKNQYSSEREV 720
AY KVFVAGGSKGVGR IVDKL+E GSEVVALVR ++A EL + GVT +L DA E K VE A+DGCDAAITTLG ++ +RVDY GN NVIE+AGILGVTRV+LVTS+GCGSS+EA V++VLK L AK +AEN+LIKYYTN++WTI+RPGGL SEP TG+++LT+D A G IHR DVA L+VK L S T + + +AVD +I + + E V
Sbjct: 53 AYKKVFVAGGSKGVGRLIVDKLIEDGSEVVALVRSQEAVDELGAIDGVTPILGDAFEYKNVENAMDGCDAAITTLGQGSATEDGKRVDYEGNSNVIEAAGILGVTRVILVTSIGCGSSKEAAPPSVFEVLKDVLAAKERAENVLIKYYTNTNWTIVRPGGLKSEPATGEAILTEDAMAIGSIHREDVASLIVKALTSSKTERKVLSAVDQSIPSASNVEGRV 274 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig79.19167.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig79.19167.1 >prot_S-ischiensis_contig79.19167.1 ID=prot_S-ischiensis_contig79.19167.1|Name=mRNA_S-ischiensis_contig79.19167.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=246bp MGHARSRLGHASAGDVRMAYGKVFVAGGSKGVGRAIVDKLVEQGSEVVALback to top mRNA from alignment at S-ischiensis_contig79:166670..170791+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig79.19167.1 ID=mRNA_S-ischiensis_contig79.19167.1|Name=mRNA_S-ischiensis_contig79.19167.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=4122bp|location=Sequence derived from alignment at S-ischiensis_contig79:166670..170791+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig79:166670..170791+ >mRNA_S-ischiensis_contig79.19167.1 ID=mRNA_S-ischiensis_contig79.19167.1|Name=mRNA_S-ischiensis_contig79.19167.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1476bp|location=Sequence derived from alignment at S-ischiensis_contig79:166670..170791+ (Schizocladia ischiensis KU_0333)back to top |