prot_S-ischiensis_contig79.19155.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig79.19155.1
Unique Nameprot_S-ischiensis_contig79.19155.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length160
Homology
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BLAST of mRNA_S-ischiensis_contig79.19155.1 vs. uniprot
Match: L1K4C4_GUITC (Uncharacterized protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1K4C4_GUITC)

HSP 1 Score: 65.9 bits (159), Expect = 1.520e-9
Identity = 49/129 (37.98%), Postives = 67/129 (51.94%), Query Frame = 0 
Query:   43 LVVEDIAWMAEHPIFGGPLPQG----VRGGLVSAGDMLNNQYGPVTFGGRAHRAPAIVRNAEGAEARKSARLQAAASDPRAR--------LEGSTMHMDGMGSFVAVGGIKAGRKRITIIEAADAEVAL 159
            L  +D+ ++  H +F   LP G    +R  L S   M   QYGP  FGG   R       A+ A + +  + +   S  R R        L GSTMH+DGMGS VA+GG+K G+K +T +EA DA +AL
Sbjct:  183 LYQDDMLFLNTHDVFSKFLPWGRASLLRDSLDSEQSM---QYGPYLFGGDKMRGSCEAA-AKDALSNQECQFEPLMSKRRVRYRGDKKDGLGGSTMHLDGMGSLVAIGGLKCGKKLVTAVEACDASLAL 307
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BLAST of mRNA_S-ischiensis_contig79.19155.1 vs. uniprot
Match: D7FUF1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUF1_ECTSI)

HSP 1 Score: 53.1 bits (126), Expect = 3.990e-5
Identity = 25/42 (59.52%), Postives = 30/42 (71.43%), Query Frame = 0 
Query:  118 RARLEGSTMHMDGMGSFVAVGGIKAGRKRITIIEAADAEVAL 159
            R R+ GST HMDGMGSF A+GG+KAG K +T  E+ D   AL
Sbjct:    6 RDRIGGSTTHMDGMGSFTAIGGLKAGEKSVTAFESEDCATAL 47
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig79.19155.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
L1K4C4_GUITC1.520e-937.98Uncharacterized protein n=2 Tax=Guillardia theta T... [more]
D7FUF1_ECTSI3.990e-559.52Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig79contigS-ischiensis_contig79:72934..74513 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig79.19155.1mRNA_S-ischiensis_contig79.19155.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig79 72460..75128 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig79.19155.1 ID=prot_S-ischiensis_contig79.19155.1|Name=mRNA_S-ischiensis_contig79.19155.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=160bp
MDVGMLQRGGCRLARVTREDEKYLGVDGLQRVVDAAMQSRTFLVVEDIAW
MAEHPIFGGPLPQGVRGGLVSAGDMLNNQYGPVTFGGRAHRAPAIVRNAE
GAEARKSARLQAAASDPRARLEGSTMHMDGMGSFVAVGGIKAGRKRITII
EAADAEVAL*
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