prot_S-ischiensis_contig79.19178.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig79.19178.1
Unique Nameprot_S-ischiensis_contig79.19178.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length491
Homology
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BLAST of mRNA_S-ischiensis_contig79.19178.1 vs. uniprot
Match: D7FIW5_ECTSI (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIW5_ECTSI)

HSP 1 Score: 97.8 bits (242), Expect = 6.880e-18
Identity = 54/115 (46.96%), Postives = 68/115 (59.13%), Query Frame = 0 
Query:  392 SQTERELAQAREVVSRMEGEQGFLRSEVSRLRDELDRTKKCVACLERCRDTVLFPCKHLILCGECYARVSL----------VAARQPAP------ARCPTCRAEIAGHLSGVVLS 490
            S  E ++A +R   S    +     +E+SRLR ELDR +KCVACL R RDT+LFPCKHL+LC +CY RV             AA    P       RCPTCRA+I GHLSG+V++
Sbjct:  575 SSREEQMASSRRPASSPSHDHSLAAAELSRLRIELDRARKCVACLSRDRDTLLFPCKHLVLCSQCYTRVVRQAEDDAVGVDAAAGIGGPPGVLGTGRCPTCRADICGHLSGIVIN 689
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BLAST of mRNA_S-ischiensis_contig79.19178.1 vs. uniprot
Match: A0A383VPS7_TETOB (RING-type E3 ubiquitin transferase n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VPS7_TETOB)

HSP 1 Score: 60.8 bits (146), Expect = 4.220e-6
Identity = 28/74 (37.84%), Postives = 42/74 (56.76%), Query Frame = 0 
Query:  424 DELDRTKKCVACLERCRDTVLFPCKHLILCGECYARVSLVAARQPAP-------ARCPTCRAEIAGHLSGVVLS 490
            ++L +   CV CL+  RDT+L PCKHL+LC  C   +  +A RQ          A CP CR  +A  ++G++L+
Sbjct:  712 EQLHQATHCVVCLDAPRDTLLLPCKHLVLCQGCSCHLQQLAQRQGGSSSSSGRSAVCPVCRVPVASQVAGIILA 785
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BLAST of mRNA_S-ischiensis_contig79.19178.1 vs. uniprot
Match: A0A7J7QCI4_9CHLO (RING-type domain-containing protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7QCI4_9CHLO)

HSP 1 Score: 50.4 bits (119), Expect = 9.600e-5
Identity = 23/55 (41.82%), Postives = 31/55 (56.36%), Query Frame = 0 
Query:  430 KKCVACLERCRDTVLFPCKHLILCGECYARVSLVAARQPAPARCPTCRAEIAGHL 484
            KKC+ C+ER RD +L PCKHL+LC  C  ++      + A   CP CR   A  +
Sbjct:    6 KKCIVCMERLRDVLLLPCKHLVLCSGCAEQLE----GRGALGSCPYCRQPCAQRV 56
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig79.19178.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FIW5_ECTSI6.880e-1846.96RING-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A383VPS7_TETOB4.220e-637.84RING-type E3 ubiquitin transferase n=1 Tax=Tetrade... [more]
A0A7J7QCI4_9CHLO9.600e-541.82RING-type domain-containing protein n=1 Tax=Scened... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 52..67
score: 42.02
coord: 133..147
score: 34.03
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 183..212
e-value: 0.094
score: 21.8
coord: 51..80
e-value: 5.2E-7
score: 39.3
coord: 150..179
e-value: 7.6E-4
score: 28.8
coord: 18..47
e-value: 0.008
score: 25.4
coord: 84..113
e-value: 0.021
score: 24.0
coord: 117..146
e-value: 3.7E-4
score: 29.8
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 183..215
score: 9.912
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 18..50
score: 13.731
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 84..116
score: 11.167
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 51..83
score: 14.319
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 117..149
score: 14.345
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 150..182
score: 11.808
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 117..237
e-value: 6.6E-34
score: 118.8
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..116
e-value: 2.3E-39
score: 136.5
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 2..223
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 2..79
e-value: 4.5E-15
score: 56.0
coord: 122..214
e-value: 1.8E-17
score: 63.7
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 1..220
score: 73.828
NoneNo IPR availablePFAMPF13920zf-C3HC4_3coord: 430..481
e-value: 1.2E-9
score: 37.9
NoneNo IPR availablePANTHERPTHR24193ANKYRIN REPEAT PROTEINcoord: 121..220
coord: 2..83
coord: 42..118
coord: 80..176
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 425..481
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 411..485
e-value: 1.1E-12
score: 49.2
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 432..477
score: 10.734

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig79contigS-ischiensis_contig79:308631..321865 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig79.19178.1mRNA_S-ischiensis_contig79.19178.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig79 307525..325138 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig79.19178.1 ID=prot_S-ischiensis_contig79.19178.1|Name=mRNA_S-ischiensis_contig79.19178.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=491bp
MARLLLEAGAEPDAATERQHRPLHLAAQYGHTSAVQLLLDRGASVDTVDE
GGYTPLHLACTYGHTDTAKLLLDRGGSVDALDAEQWSPLHWATQLGNIYT
ATMLLERGADRDARTRKGHQGLHLAAENGHTETVKMLLNQGAELDSKDEV
SYTPLHWAAQYGHVAAVRLLLERGACANSLGGYSDTPLHLACLLGHGHAA
EELLASRADPTLRDADGKLPEDVVGQGEGISLNAADKRALIGLVARHRGG
GEGGDGSIGAGAGEPSTPRNSGGGGDGGGCGGRGGSGGARRGRSGEEEAP
CAGGVSPVGGESGGGAEAPSGPGEGGAGGGCCLRGPGRAGAGAGGAGAGA
DVCVWGGVAPAGEEGGAGSGAGAAGVAFGGGGGEAAGAVSGSQTERELAQ
AREVVSRMEGEQGFLRSEVSRLRDELDRTKKCVACLERCRDTVLFPCKHL
ILCGECYARVSLVAARQPAPARCPTCRAEIAGHLSGVVLS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom
IPR013083Znf_RING/FYVE/PHD
IPR001841Znf_RING