prot_S-ischiensis_contig77.19037.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig77.19037.1
Unique Nameprot_S-ischiensis_contig77.19037.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length207
Homology
BLAST of mRNA_S-ischiensis_contig77.19037.1 vs. uniprot
Match: A0A6H5KAK0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAK0_9PHAE)

HSP 1 Score: 144 bits (362), Expect = 7.990e-39
Identity = 79/199 (39.70%), Postives = 120/199 (60.30%), Query Frame = 0
Query:   11 RSLYGLKQSPRLWHATLHAFLLDAGLVPSEIEPCVHIKRGKNWGLPDLLMSIYVDSLLITGANPISVETLLKSMSARFDTQDLGTAAYLLGMEIKRNRDLRTLHLSQKKYADDILHRFGMDSCISVPTPG---DFDNFHPVGQTLLEPTDHGIYREIIGSLLYLCRLTRPDISYAVMQLSRVVSKPYAIHMAAAKHLLR 206
            RSLYGL QSP LW+ TL   L   G   ++ +PCV++    N     +++++YVD +LITG +   V+   K ++ RF+  D+G    +LG++++R+ +  TL +SQ+ Y + +L RFGM     V TPG   +     P  Q +L PTD   Y+ + GS+LYL + TR D+SYA +QLS+  S P  ++M AAKH+LR
Sbjct:    7 RSLYGLSQSPALWNDTLDESLTVFGWKRTQSDPCVYVYTSGNI---IVILTVYVDDILITGGDQQLVDQKKKELTDRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQDQ-ILGPTDKKNYQSMTGSILYLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHVLR 201          
BLAST of mRNA_S-ischiensis_contig77.19037.1 vs. uniprot
Match: A0A6H5L4L2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4L2_9PHAE)

HSP 1 Score: 145 bits (367), Expect = 3.280e-38
Identity = 74/197 (37.56%), Postives = 119/197 (60.41%), Query Frame = 0
Query:   10 KRSLYGLKQSPRLWHATLHAFLLDAGLVPSEIEPCVHIKRGKNWGLPDLLMSIYVDSLLITGANPISVETLLKSMSARFDTQDLGTAAYLLGMEIKRNRDLRTLHLSQKKYADDILHRFGMDSCISVPTPGDFDNFHPVGQTLLEPTDHGIYREIIGSLLYLCRLTRPDISYAVMQLSRVVSKPYAIHMAAAKHLLR 206
            K  LYGL+ SP+ W+ T H FLL+ G VPS  +PC++   G      ++++ +YVD +L+TGA    V T+++ M  RF+T DLG A ++LGM I+RN +  T+ L+Q+ Y   +L +FGM    +  TP + +      +  L P    ++R   GS+LY+ R +RPDIS++V+ L++ ++KP    +A  K L+R
Sbjct:   61 KAWLYGLRLSPKSWNGTFHLFLLEIGFVPSTADPCLYTLNGG-----EVILLVYVDDILLTGAKEELVTTIIEQMKERFETVDLGEAKFILGMAIQRNLEAGTILLTQEAYTKAVLAKFGMADVRATATPAEKEPVTTKEENALSPEQTTMFRSATGSVLYISRGSRPDISHSVLVLTKSMAKPGPKALAKLKRLMR 252          
BLAST of mRNA_S-ischiensis_contig77.19037.1 vs. uniprot
Match: A0A6H5KE92_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE92_9PHAE)

HSP 1 Score: 147 bits (370), Expect = 3.500e-37
Identity = 80/200 (40.00%), Postives = 122/200 (61.00%), Query Frame = 0
Query:   10 KRSLYGLKQSPRLWHATLHAFLLDAGLVPSEIEPCVHIKRGKNWGLPDLLMSIYVDSLLITGANPISVETLLKSMSARFDTQDLGTAAYLLGMEIKRNRDLRTLHLSQKKYADDILHRFGMDSCISVPTPG---DFDNFHPVGQTLLEPTDHGIYREIIGSLLYLCRLTRPDISYAVMQLSRVVSKPYAIHMAAAKHLLR 206
            +RSLYGL QSP LW+ TL   L   G   ++ +PCV++    N     +++++YVD +LITG +   V+   K ++ RF+  D+G    +LG++++R+ +  TL +SQ+ Y + +L RFGM     V TPG   +     P  Q +L PTD  IY+ + GS+LYL + TR D+SYA +QLS+  S P  ++M AAKH+LR
Sbjct:  489 ERSLYGLSQSPALWNDTLDESLTVFGWKRTQSDPCVYVYTSGNI---IVILTVYVDDILITGGDQQLVDQKKKELTDRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQDQ-ILGPTDKKIYQSMTGSILYLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHVLR 684          
BLAST of mRNA_S-ischiensis_contig77.19037.1 vs. uniprot
Match: A0A6H5KG29_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG29_9PHAE)

HSP 1 Score: 140 bits (354), Expect = 3.920e-37
Identity = 78/199 (39.20%), Postives = 121/199 (60.80%), Query Frame = 0
Query:   10 KRSLYGLKQSPRLWHATLHAFLLDAGLVPSEIEPCVHIKRGKNWGLPDLLMSIYVDSLLITGANPISVETLLKSMSARFDTQDLGTAAYLLGMEIKRNRDLRTLHLSQKKYADDILHRFGMDSCISVPTPG---DFDNFHPVGQTLLEPTDHGIYREIIGSLLYLCRLTRPDISYAVMQLSRVVSKPYAIHMAAAKHLL 205
            +RSLYGL QSP L + TL   L   G   ++ +PCV++    N     +++++YVD +LITG +   V+   K ++ RF+  D+G    +LG++++R+ +  TL +SQ+ Y + +L RFGM     V TPG   +     P  Q +L PTD+ IY+ + GS+LYL + TR D+SYA +QLS+  S P  ++M AAKH+L
Sbjct:  135 ERSLYGLSQSPALLNDTLDESLTVFGWKRTQSDPCVYVYTSGNI---IVILTVYVDDILITGGDQQLVDQKKKELTDRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQDQ-ILGPTDNKIYQSMTGSILYLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHVL 329          
BLAST of mRNA_S-ischiensis_contig77.19037.1 vs. uniprot
Match: A0A6H5JNR9_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNR9_9PHAE)

HSP 1 Score: 147 bits (370), Expect = 3.990e-37
Identity = 79/197 (40.10%), Postives = 118/197 (59.90%), Query Frame = 0
Query:   10 KRSLYGLKQSPRLWHATLHAFLLDAGLVPSEIEPCVHIKRGKNWGLPDLLMSIYVDSLLITGANPISVETLLKSMSARFDTQDLGTAAYLLGMEIKRNRDLRTLHLSQKKYADDILHRFGMDSCISVPTPGDFDNFHPVGQTLLEPTDHGIYREIIGSLLYLCRLTRPDISYAVMQLSRVVSKPYAIHMAAAKHLLR 206
            K  LYGL+ SP+ W+ T H FLL+ G V S  +PC++I          +L+ +YVD +L++G++   V  +++ +  RFDT  LG A +LLGM ++RN D  T+ LSQ+ YA  +L +FGM    S  TP +      V + +L P D   +R   GSLLYL R +RPDI+++VM L++ ++KP    MA  K +LR
Sbjct: 1118 KAWLYGLRLSPKGWNGTFHDFLLEIGFVQSTADPCLYILNAGG-----VLLLVYVDDILLSGSDEAQVMRVVEQLKERFDTVFLGDAQFLLGMALERNVDAGTIFLSQEMYAKAVLDKFGMADAHSTKTPAEAGPISTVEEKVLSPEDTVYFRSATGSLLYLSRGSRPDITHSVMVLTKSMAKPGPKAMAKLKRVLR 1309          
BLAST of mRNA_S-ischiensis_contig77.19037.1 vs. uniprot
Match: A0A6H5KGY1_9PHAE (Integrase catalytic domain-containing protein n=7 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGY1_9PHAE)

HSP 1 Score: 147 bits (370), Expect = 4.030e-37
Identity = 79/197 (40.10%), Postives = 118/197 (59.90%), Query Frame = 0
Query:   10 KRSLYGLKQSPRLWHATLHAFLLDAGLVPSEIEPCVHIKRGKNWGLPDLLMSIYVDSLLITGANPISVETLLKSMSARFDTQDLGTAAYLLGMEIKRNRDLRTLHLSQKKYADDILHRFGMDSCISVPTPGDFDNFHPVGQTLLEPTDHGIYREIIGSLLYLCRLTRPDISYAVMQLSRVVSKPYAIHMAAAKHLLR 206
            K  LYGL+ SP+ W+ T H FLL+ G V S  +PC++I          +L+ +YVD +L++G++   V  +++ +  RFDT  LG A +LLGM ++RN D  T+ LSQ+ YA  +L +FGM    S  TP +      V + +L P D   +R   GSLLYL R +RPDI+++VM L++ ++KP    MA  K +LR
Sbjct: 1355 KAWLYGLRLSPKGWNGTFHDFLLEIGFVQSTADPCLYILNAGG-----VLLLVYVDDILLSGSDEAQVMRVVEQLKERFDTVFLGDAQFLLGMALERNVDAGTIFLSQEMYAKAVLDKFGMADAHSTKTPAEAGPISTVEEKVLSPEDTVYFRSATGSLLYLSRGSRPDITHSVMVLTKSMAKPGPKAMAKLKRVLR 1546          
BLAST of mRNA_S-ischiensis_contig77.19037.1 vs. uniprot
Match: A0A6H5KBY7_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBY7_9PHAE)

HSP 1 Score: 147 bits (370), Expect = 4.040e-37
Identity = 79/197 (40.10%), Postives = 118/197 (59.90%), Query Frame = 0
Query:   10 KRSLYGLKQSPRLWHATLHAFLLDAGLVPSEIEPCVHIKRGKNWGLPDLLMSIYVDSLLITGANPISVETLLKSMSARFDTQDLGTAAYLLGMEIKRNRDLRTLHLSQKKYADDILHRFGMDSCISVPTPGDFDNFHPVGQTLLEPTDHGIYREIIGSLLYLCRLTRPDISYAVMQLSRVVSKPYAIHMAAAKHLLR 206
            K  LYGL+ SP+ W+ T H FLL+ G V S  +PC++I          +L+ +YVD +L++G++   V  +++ +  RFDT  LG A +LLGM ++RN D  T+ LSQ+ YA  +L +FGM    S  TP +      V + +L P D   +R   GSLLYL R +RPDI+++VM L++ ++KP    MA  K +LR
Sbjct: 1426 KAWLYGLRLSPKGWNGTFHDFLLEIGFVQSTADPCLYILNAGG-----VLLLVYVDDILLSGSDEAQVMRVVEQLKERFDTVFLGDAQFLLGMALERNVDAGTIFLSQEMYAKAVLDKFGMADAHSTKTPAEAGPISTVEEKVLSPEDTVYFRSATGSLLYLSRGSRPDITHSVMVLTKSMAKPGPKAMAKLKRVLR 1617          
BLAST of mRNA_S-ischiensis_contig77.19037.1 vs. uniprot
Match: A0A6H5JSH8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSH8_9PHAE)

HSP 1 Score: 147 bits (370), Expect = 4.040e-37
Identity = 79/197 (40.10%), Postives = 118/197 (59.90%), Query Frame = 0
Query:   10 KRSLYGLKQSPRLWHATLHAFLLDAGLVPSEIEPCVHIKRGKNWGLPDLLMSIYVDSLLITGANPISVETLLKSMSARFDTQDLGTAAYLLGMEIKRNRDLRTLHLSQKKYADDILHRFGMDSCISVPTPGDFDNFHPVGQTLLEPTDHGIYREIIGSLLYLCRLTRPDISYAVMQLSRVVSKPYAIHMAAAKHLLR 206
            K  LYGL+ SP+ W+ T H FLL+ G V S  +PC++I          +L+ +YVD +L++G++   V  +++ +  RFDT  LG A +LLGM ++RN D  T+ LSQ+ YA  +L +FGM    S  TP +      V + +L P D   +R   GSLLYL R +RPDI+++VM L++ ++KP    MA  K +LR
Sbjct: 1233 KAWLYGLRLSPKGWNGTFHDFLLEIGFVQSTADPCLYILNAGG-----VLLLVYVDDILLSGSDEAQVMRVVEQLKERFDTVFLGDAQFLLGMALERNVDAGTIFLSQEMYAKAVLDKFGMADAHSTKTPAEAGPISTVEEKVLSPEDTVYFRSATGSLLYLSRGSRPDITHSVMVLTKSMAKPGPKAMAKLKRVLR 1424          
BLAST of mRNA_S-ischiensis_contig77.19037.1 vs. uniprot
Match: A0A6H5K2K1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2K1_9PHAE)

HSP 1 Score: 147 bits (370), Expect = 4.110e-37
Identity = 79/197 (40.10%), Postives = 118/197 (59.90%), Query Frame = 0
Query:   10 KRSLYGLKQSPRLWHATLHAFLLDAGLVPSEIEPCVHIKRGKNWGLPDLLMSIYVDSLLITGANPISVETLLKSMSARFDTQDLGTAAYLLGMEIKRNRDLRTLHLSQKKYADDILHRFGMDSCISVPTPGDFDNFHPVGQTLLEPTDHGIYREIIGSLLYLCRLTRPDISYAVMQLSRVVSKPYAIHMAAAKHLLR 206
            K  LYGL+ SP+ W+ T H FLL+ G V S  +PC++I          +L+ +YVD +L++G++   V  +++ +  RFDT  LG A +LLGM ++RN D  T+ LSQ+ YA  +L +FGM    S  TP +      V + +L P D   +R   GSLLYL R +RPDI+++VM L++ ++KP    MA  K +LR
Sbjct: 1896 KAWLYGLRLSPKGWNGTFHDFLLEIGFVQSTADPCLYILNAGG-----VLLLVYVDDILLSGSDEAQVMRVVEQLKERFDTVFLGDAQFLLGMALERNVDAGTIFLSQEMYAKAVLDKFGMADAHSTKTPAEAGPISTVEEKVLSPEDTVYFRSATGSLLYLSRGSRPDITHSVMVLTKSMAKPGPKAMAKLKRVLR 2087          
BLAST of mRNA_S-ischiensis_contig77.19037.1 vs. uniprot
Match: A0A6H5KP38_9PHAE (Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP38_9PHAE)

HSP 1 Score: 147 bits (370), Expect = 4.180e-37
Identity = 79/197 (40.10%), Postives = 118/197 (59.90%), Query Frame = 0
Query:   10 KRSLYGLKQSPRLWHATLHAFLLDAGLVPSEIEPCVHIKRGKNWGLPDLLMSIYVDSLLITGANPISVETLLKSMSARFDTQDLGTAAYLLGMEIKRNRDLRTLHLSQKKYADDILHRFGMDSCISVPTPGDFDNFHPVGQTLLEPTDHGIYREIIGSLLYLCRLTRPDISYAVMQLSRVVSKPYAIHMAAAKHLLR 206
            K  LYGL+ SP+ W+ T H FLL+ G V S  +PC++I          +L+ +YVD +L++G++   V  +++ +  RFDT  LG A +LLGM ++RN D  T+ LSQ+ YA  +L +FGM    S  TP +      V + +L P D   +R   GSLLYL R +RPDI+++VM L++ ++KP    MA  K +LR
Sbjct: 2673 KAWLYGLRLSPKGWNGTFHDFLLEIGFVQSTADPCLYILNAGG-----VLLLVYVDDILLSGSDEAQVMRVVEQLKERFDTVFLGDAQFLLGMALERNVDAGTIFLSQEMYAKAVLDKFGMADAHSTKTPAEAGPISTVEEKVLSPEDTVYFRSATGSLLYLSRGSRPDITHSVMVLTKSMAKPGPKAMAKLKRVLR 2864          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig77.19037.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KAK0_9PHAE7.990e-3939.70Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5L4L2_9PHAE3.280e-3837.56Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KE92_9PHAE3.500e-3740.00Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KG29_9PHAE3.920e-3739.20Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JNR9_9PHAE3.990e-3740.10Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KGY1_9PHAE4.030e-3740.10Integrase catalytic domain-containing protein n=7 ... [more]
A0A6H5KBY7_9PHAE4.040e-3740.10Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JSH8_9PHAE4.040e-3740.10Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5K2K1_9PHAE4.110e-3740.10Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KP38_9PHAE4.180e-3740.10Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 10..139
e-value: 6.5E-21
score: 75.1
NoneNo IPR availablePANTHERPTHR11439:SF257coord: 60..206
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 10..195
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 60..206

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig77contigS-ischiensis_contig77:522448..523068 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig77.19037.1mRNA_S-ischiensis_contig77.19037.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig77 522131..523572 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig77.19037.1 ID=prot_S-ischiensis_contig77.19037.1|Name=mRNA_S-ischiensis_contig77.19037.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=207bp
MAPILSVSSKRSLYGLKQSPRLWHATLHAFLLDAGLVPSEIEPCVHIKRG
KNWGLPDLLMSIYVDSLLITGANPISVETLLKSMSARFDTQDLGTAAYLL
GMEIKRNRDLRTLHLSQKKYADDILHRFGMDSCISVPTPGDFDNFHPVGQ
TLLEPTDHGIYREIIGSLLYLCRLTRPDISYAVMQLSRVVSKPYAIHMAA
AKHLLR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like