mRNA_S-ischiensis_contig107.1899.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig107.1899.1 vs. uniprot
Match: A0A6H5L264_9PHAE (AAA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L264_9PHAE) HSP 1 Score: 365 bits (937), Expect = 1.240e-120 Identity = 198/257 (77.04%), Postives = 217/257 (84.44%), Query Frame = 2
Query: 2 DEAKLELAEIVNFLRDQKRYLEIGASLPKGVLLSGPSGTGKTLLARAMAAEAGVPFFSCSASDFVEMLVGRGAARVRDLFQRGVAAQPSIIFIDELDALAKVRGGINSNDEREQTLNQLLTEMDGFDSEGRSVVVVAATNRPEVLDPALTRPGRFNRHVDVGLPDQAGRKSILEVHCGKVRL-GEDVD----LQRVAEQTPGFSGAELANVVNEAALLAVRHSSRIVLASHLSMAVQRARAYRDLYNVQGSAQPLDL 757
DEAK+EL E+V+FL RY ++GA LP+GVLLSGPSGTGKTLLARAMAAEA VPFFSCSASDFVEMLVGRGAARVRDLFQRGVA+QPSIIFIDELDALAKVRGGINSNDEREQTLNQLLTEMDGFDSEGRSV+VVAATNRPEVLDPALTRPGRF+RHV VGLPD GR++ILEVHC KVR+ G D L+ +A T GFSGAELANVVNEAA+LA RHS V HL MAV R RAYR+ Y V S+ +D+
Sbjct: 42 DEAKVELKELVDFLTFPARYADVGARLPRGVLLSGPSGTGKTLLARAMAAEARVPFFSCSASDFVEMLVGRGAARVRDLFQRGVASQPSIIFIDELDALAKVRGGINSNDEREQTLNQLLTEMDGFDSEGRSVLVVAATNRPEVLDPALTRPGRFDRHVTVGLPDAPGRRAILEVHCRKVRMQGGRQDTIAVLENIARVTAGFSGAELANVVNEAAILAARHSEVEVGVGHLRMAVARTRAYREEYGVAPSSGLVDV 298
BLAST of mRNA_S-ischiensis_contig107.1899.1 vs. uniprot
Match: D8LSS7_ECTSI (AAA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSS7_ECTSI) HSP 1 Score: 342 bits (877), Expect = 7.130e-110 Identity = 183/221 (82.81%), Postives = 197/221 (89.14%), Query Frame = 2
Query: 2 DEAKLELAEIVNFLRDQKRYLEIGASLPKGVLLSGPSGTGKTLLARAMAAEAGVPFFSCSASDFVEMLVGRGAARVRDLFQRGVAAQPSIIFIDELDALAKVRGGINSNDEREQTLNQLLTEMDGFDSEGRSVVVVAATNRPEVLDPALTRPGRFNRHVDVGLPDQAGRKSILEVHCGKVRL-GEDVD----LQRVAEQTPGFSGAELANVVNEAALLAVR 649
DEAK+EL E+V+FL RY +IGA LP+GVLLSGPSGTGKTLLARAMAAEA VPFFSCSASDFVEMLVGRGAARVRDLFQRGVA+QPSIIFIDELDALAKVRGGINSNDEREQTLNQLLTEMDGFDSEGRSV+VVAATNRPEVLDPALTRPGRF+RHV VGLPD GR++ILEVHC KVR+ GE D L+ +A T GFSGAELANVVNEAA+LA R
Sbjct: 198 DEAKVELKELVDFLTFPARYADIGARLPRGVLLSGPSGTGKTLLARAMAAEARVPFFSCSASDFVEMLVGRGAARVRDLFQRGVASQPSIIFIDELDALAKVRGGINSNDEREQTLNQLLTEMDGFDSEGRSVLVVAATNRPEVLDPALTRPGRFDRHVTVGLPDAPGRRAILEVHCRKVRMQGERQDTIAVLENIARVTAGFSGAELANVVNEAAILAAR 418
BLAST of mRNA_S-ischiensis_contig107.1899.1 vs. uniprot
Match: A0A835Z9E9_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9E9_9STRA) HSP 1 Score: 333 bits (853), Expect = 2.530e-108 Identity = 176/253 (69.57%), Postives = 201/253 (79.45%), Query Frame = 2
Query: 17 ELAEIVNFLRDQKRYLEIGASLPKGVLLSGPSGTGKTLLARAMAAEAGVPFFSCSASDFVEMLVGRGAARVRDLFQRGVAAQPSIIFIDELDALAKVRGGINSNDEREQTLNQLLTEMDGFDSEGRSVVV--------------VAATNRPEVLDPALTRPGRFNRHVDVGLPDQAGRKSILEVHCGKVRLGEDVDLQRVAEQTPGFSGAELANVVNEAALLAVRHSSRIVLASHLSMAVQRARAYRDLYNVQ 733
ELAE+V+FLRD +RY +GA LP+G+LLSGPSGTGKTLLARA+AAE+ VPF SCSASDFVEMLVGRGA+RVRDLF+RG AA P IIF+DELDALAK RGG+NSNDEREQTLNQLLTE+DGFDS + +AATNRPEVLDPALTRPGRF+RHV VGLPD+ GR SIL VH KVR G DVDL+ VA +T GFSGAELAN+VNEAALLAVR V A H+ A+ RA+AYR LY+V+
Sbjct: 15 ELAEVVDFLRDARRYEAMGARLPRGILLSGPSGTGKTLLARAVAAESRVPFISCSASDFVEMLVGRGASRVRDLFKRGAAAAPCIIFVDELDALAKARGGLNSNDEREQTLNQLLTELDGFDSSVAASAXXXXXXXXXXXXXXXIAATNRPEVLDPALTRPGRFDRHVHVGLPDERGRVSILTVHMRKVRAGPDVDLRTVARETAGFSGAELANIVNEAALLAVRGGGESVQAEHMRSALSRAKAYRSLYSVE 267
BLAST of mRNA_S-ischiensis_contig107.1899.1 vs. uniprot
Match: A0A4D9CR60_9STRA (AAA domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CR60_9STRA) HSP 1 Score: 303 bits (777), Expect = 3.100e-95 Identity = 160/240 (66.67%), Postives = 188/240 (78.33%), Query Frame = 2
Query: 2 DEAKLELAEIVNFLRDQKRYLEIGASLPKGVLLSGPSGTGKTLLARAMAAEAGVPFFSCSASDFVEMLVGRGAARVRDLFQRGVAAQPSIIFIDELDALAKVRGGINSNDEREQTLNQLLTEMDGFDSEGRSVVVVAATNRPEVLDPALTRPGRFNRHVDVGLPDQAGRKSILEVHCGKVRLGEDVDLQRVAEQTPGFSGAELANVVNEAALLAVRHSSRIVLASHLSMAVQRARAYRDL 721
D AKLEL E+VNFLRD+ RY IGA LPKG+LLSG GTGKTLLARA+A EAGV F SCSAS+F E+LVGRGAAR+RDLFQRG ++ P IIFIDELDALAK RG +SNDEREQTLNQLL EMDGF+ E V+V+AATNRPEVLDPAL RPGRF+RH+ VGLPD GR++IL+VH V L VD+QR+A ++ G+SGAEL+NVVNEAALLAVR + + A++R R L
Sbjct: 117 DAAKLELVEVVNFLRDRARYDAIGARLPKGILLSGAPGTGKTLLARAVANEAGVSFISCSASEFCELLVGRGAARMRDLFQRGFSSSPCIIFIDELDALAKTRGSFSSNDEREQTLNQLLCEMDGFEGEENCVLVIAATNRPEVLDPALIRPGRFDRHIAVGLPDTRGRRAILDVHSRHVCLAPGVDMQRIATRSKGYSGAELSNVVNEAALLAVRAGLGVTTQACFEEALERNNQSRKL 356
BLAST of mRNA_S-ischiensis_contig107.1899.1 vs. uniprot
Match: A0A024FZ62_9STRA (AAA domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024FZ62_9STRA) HSP 1 Score: 300 bits (769), Expect = 4.440e-95 Identity = 164/238 (68.91%), Postives = 184/238 (77.31%), Query Frame = 2
Query: 2 DEAKLELAEIVNFLRDQKRYLEIGASLPKGVLLSGPSGTGKTLLARAMAAEAGVPFFSCSASDFVEMLVGRGAARVRDLFQRGVAAQPSIIFIDELDALAKVRGGINSNDEREQTLNQLLTEMDGF-DSEGRSVVVVAATNRPEVLDPALTRPGRFNRHVDVGLPDQAGRKSILEVHCGKVRLGEDVDLQRVAEQTPGF---SGAELANVVNEAALLAVRHSSRIVLASHLSMAVQRA 703
D A+ EL EIV+FL + RY IGA +PKG+LL GPSGTGKTLLARA+AAEA V F CSASDFVEMLVGRGAARVRDLF + IIFIDE+DALAK RGGINSNDEREQTLNQLLTEMDGF SE SV+V+AATNRP+VLDPAL RPGRF+RHV VGLPD GR IL++H +V+LG+DVDL RVAE SGAELAN+VNEAALLAVRH V H +A+ RA
Sbjct: 74 DSARKELEEIVDFLHNPDRYRAIGARVPKGILLCGPSGTGKTLLARALAAEANVAFLFCSASDFVEMLVGRGAARVRDLFTQAATYDRCIIFIDEIDALAKARGGINSNDEREQTLNQLLTEMDGFAGSESNSVIVIAATNRPQVLDPALCRPGRFDRHVYVGLPDHKGRLDILKLHTRRVKLGDDVDLNRVAENCGIMGQQSGAELANLVNEAALLAVRHGHTCVCQEHFDLALSRA 311
BLAST of mRNA_S-ischiensis_contig107.1899.1 vs. uniprot
Match: M4BWX0_HYAAE (AAA domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BWX0_HYAAE) HSP 1 Score: 299 bits (765), Expect = 1.270e-94 Identity = 159/237 (67.09%), Postives = 186/237 (78.48%), Query Frame = 2
Query: 2 DEAKLELAEIVNFLRDQKRYLEIGASLPKGVLLSGPSGTGKTLLARAMAAEAGVPFFSCSASDFVEMLVGRGAARVRDLFQRGVAAQPSIIFIDELDALAKVRGGINSNDEREQTLNQLLTEMDGFDSEGRSVVVVAATNRPEVLDPALTRPGRFNRHVDVGLPDQAGRKSILEVHCGKVRLGEDVDLQRVAEQ---TPGFSGAELANVVNEAALLAVRHSSRIVLASHLSMAVQRA 703
D A+ EL E+V+FLR RYL IGA +PKGVLL GPSGTGKTLLARA+A+EAGV F CSASDFVEMLVGRGAARVRDLF + IIFIDE+DALAKVRGG+NSNDEREQTLNQLLTEMDGF+ ++++AATNRPEVLDPAL RPGRF+RHV VGLPD GR+ IL+VHC +VRL +VDL VAE+ + SGA+LA++VNEAALLAVRH + H +A+ RA
Sbjct: 50 DGARKELEEVVDFLRHPARYLAIGAKVPKGVLLCGPSGTGKTLLARAVASEAGVAFLFCSASDFVEMLVGRGAARVRDLFTQASQFPQCIIFIDEIDALAKVRGGLNSNDEREQTLNQLLTEMDGFEGNADGIILIAATNRPEVLDPALCRPGRFDRHVYVGLPDTQGREEILKVHCRRVRLDNEVDLSVVAEECGHSGQRSGAQLASLVNEAALLAVRHGETSIKHMHFELAMNRA 286
BLAST of mRNA_S-ischiensis_contig107.1899.1 vs. uniprot
Match: A0A3R7G257_9STRA (AAA domain-containing protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7G257_9STRA) HSP 1 Score: 301 bits (772), Expect = 4.120e-94 Identity = 161/237 (67.93%), Postives = 186/237 (78.48%), Query Frame = 2
Query: 2 DEAKLELAEIVNFLRDQKRYLEIGASLPKGVLLSGPSGTGKTLLARAMAAEAGVPFFSCSASDFVEMLVGRGAARVRDLFQRGVAAQPSIIFIDELDALAKVRGGINSNDEREQTLNQLLTEMDGFDSEGRSVVVVAATNRPEVLDPALTRPGRFNRHVDVGLPDQAGRKSILEVHCGKVRLGEDVDLQRVAEQTPGF---SGAELANVVNEAALLAVRHSSRIVLASHLSMAVQRA 703
D A+ EL E+V+FLR+ RY IGA +PKGV+L GPSGTGKTLLARA+A+EAGV F CSASDFVEMLVGRGAARVRDLF + IIFIDE+DALAK RGG NSNDEREQTLNQLLTEMDGF+ V+V+AATNRPEVLDPAL RPGRF+RHV VGLPD GR++ILEVHC VRL +DV+L VAE+ SGA+LA++VNEAALLAVRH V +HL +A+ RA
Sbjct: 164 DVARKELEEVVDFLRNPARYQAIGAKVPKGVMLCGPSGTGKTLLARAVASEAGVAFLFCSASDFVEMLVGRGAARVRDLFTQASQYPQCIIFIDEIDALAKARGGFNSNDEREQTLNQLLTEMDGFEGNANGVIVIAATNRPEVLDPALCRPGRFDRHVYVGLPDAKGREAILEVHCRNVRLDDDVNLSVVAEECGQMGQRSGAQLASLVNEAALLAVRHGDTTVKHAHLELAMNRA 400
BLAST of mRNA_S-ischiensis_contig107.1899.1 vs. uniprot
Match: A0A6G0JYW8_9STRA (AAA domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6G0JYW8_9STRA) HSP 1 Score: 299 bits (765), Expect = 7.410e-93 Identity = 159/237 (67.09%), Postives = 183/237 (77.22%), Query Frame = 2
Query: 2 DEAKLELAEIVNFLRDQKRYLEIGASLPKGVLLSGPSGTGKTLLARAMAAEAGVPFFSCSASDFVEMLVGRGAARVRDLFQRGVAAQPSIIFIDELDALAKVRGGINSNDEREQTLNQLLTEMDGFDSEGRSVVVVAATNRPEVLDPALTRPGRFNRHVDVGLPDQAGRKSILEVHCGKVRLGEDVDLQRVAEQTPGF---SGAELANVVNEAALLAVRHSSRIVLASHLSMAVQRA 703
D A+ EL E+V+FLR RY IGA +PKGV+L GPSGTGKTLLARA+A+EAGV F CSASDFVEMLVGRGAARVRDLF + IIFIDE+DALAK RGG NSNDEREQTLNQLLTEMDGF+ V+V+AATNRPEVLDPAL RPGRF+RHV VGLPD GR++ILEVHC VRL +VDL +AE+ SGA+LA++VNEAALLAVRH + SH +A+ RA
Sbjct: 179 DGARKELEEVVDFLRHPTRYQAIGAKVPKGVMLCGPSGTGKTLLARAVASEAGVAFLFCSASDFVEMLVGRGAARVRDLFTQASQYPQCIIFIDEIDALAKARGGFNSNDEREQTLNQLLTEMDGFEGNANGVIVIAATNRPEVLDPALCRPGRFDRHVYVGLPDAKGREAILEVHCHNVRLDSEVDLSVIAEECGQLGQRSGAQLASLVNEAALLAVRHGDTSIKHSHFELAMNRA 415
BLAST of mRNA_S-ischiensis_contig107.1899.1 vs. uniprot
Match: A0A2D4BLA5_PYTIN (AAA domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BLA5_PYTIN) HSP 1 Score: 297 bits (761), Expect = 2.380e-92 Identity = 161/237 (67.93%), Postives = 185/237 (78.06%), Query Frame = 2
Query: 2 DEAKLELAEIVNFLRDQKRYLEIGASLPKGVLLSGPSGTGKTLLARAMAAEAGVPFFSCSASDFVEMLVGRGAARVRDLFQRGVAAQPSIIFIDELDALAKVRGGINSNDEREQTLNQLLTEMDGFDSEGRSVVVVAATNRPEVLDPALTRPGRFNRHVDVGLPDQAGRKSILEVHCGKVRLGEDVDLQRVAE---QTPGFSGAELANVVNEAALLAVRHSSRIVLASHLSMAVQRA 703
D A+ EL E+V+FL++ RY IGA +PKGVLL GPSGTGKTLLARA+A+EAGV F CSASDFVEMLVGRGAARVRDLF + IIFIDE+DALAK RGG+NSNDEREQTLNQLLTEMDGF+ V+V+AATNRPEVLDPAL RPGRF+RHV VGLPD AGR++IL VH VRL +DVDL+ VAE Q SGA+LA++VNEAALLAVRH V H +A+ RA
Sbjct: 176 DTARKELEEVVDFLKNPSRYEAIGARVPKGVLLCGPSGTGKTLLARAVASEAGVAFLFCSASDFVEMLVGRGAARVRDLFTQAAQYPRCIIFIDEIDALAKARGGLNSNDEREQTLNQLLTEMDGFEGNLNGVIVIAATNRPEVLDPALCRPGRFDRHVYVGLPDAAGREAILRVHTKGVRLADDVDLKVVAEECGQLGQHSGAQLASLVNEAALLAVRHGDTTVKHCHFELAMSRA 412
BLAST of mRNA_S-ischiensis_contig107.1899.1 vs. uniprot
Match: A0A662WQK5_9STRA (AAA domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WQK5_9STRA) HSP 1 Score: 296 bits (758), Expect = 3.990e-92 Identity = 160/237 (67.51%), Postives = 179/237 (75.53%), Query Frame = 2
Query: 2 DEAKLELAEIVNFLRDQKRYLEIGASLPKGVLLSGPSGTGKTLLARAMAAEAGVPFFSCSASDFVEMLVGRGAARVRDLFQRGVAAQPSIIFIDELDALAKVRGGINSNDEREQTLNQLLTEMDGFDSEGRSVVVVAATNRPEVLDPALTRPGRFNRHVDVGLPDQAGRKSILEVHCGKVRLGEDVDLQRVAEQTPGF---SGAELANVVNEAALLAVRHSSRIVLASHLSMAVQRA 703
D A+ EL E+V+FLR RY IGA +PKGVLL GPSGTGKTLLARA+A+EAGV F CSASDFVEMLVGRGAARVRDLF + IIFIDE+DALAK RGG NSNDEREQTLNQLLTEMDGF+ V+V+AATNRPEVLDPAL RPGRF+RHV VG PD GR+ IL VHC V L EDVDL VAE+ SGA+LA++VNEAALLAVRH V H +A+ RA
Sbjct: 156 DIARKELEEVVDFLRHPSRYQAIGAKVPKGVLLCGPSGTGKTLLARAVASEAGVAFLFCSASDFVEMLVGRGAARVRDLFTQASQYPQCIIFIDEIDALAKARGGFNSNDEREQTLNQLLTEMDGFEGNANGVIVIAATNRPEVLDPALCRPGRFDRHVYVGFPDVKGREEILHVHCRSVLLSEDVDLSVVAEECGQLGQRSGAQLASLVNEAALLAVRHGDTCVKHEHFELAMNRA 392 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig107.1899.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig107.1899.1 >prot_S-ischiensis_contig107.1899.1 ID=prot_S-ischiensis_contig107.1899.1|Name=mRNA_S-ischiensis_contig107.1899.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=209bp MAAEAGVPFFSCSASDFVEMLVGRGAARVRDLFQRGVAAQPSIIFIDELDback to top mRNA from alignment at S-ischiensis_contig107:56541..64689+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig107.1899.1 ID=mRNA_S-ischiensis_contig107.1899.1|Name=mRNA_S-ischiensis_contig107.1899.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=8149bp|location=Sequence derived from alignment at S-ischiensis_contig107:56541..64689+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig107:56541..64689+ >mRNA_S-ischiensis_contig107.1899.1 ID=mRNA_S-ischiensis_contig107.1899.1|Name=mRNA_S-ischiensis_contig107.1899.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1254bp|location=Sequence derived from alignment at S-ischiensis_contig107:56541..64689+ (Schizocladia ischiensis KU_0333)back to top |