prot_S-ischiensis_contig77.19007.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig77.19007.1
Unique Nameprot_S-ischiensis_contig77.19007.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length101
Homology
BLAST of mRNA_S-ischiensis_contig77.19007.1 vs. uniprot
Match: D7G0I5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0I5_ECTSI)

HSP 1 Score: 103 bits (256), Expect = 4.700e-25
Identity = 63/101 (62.38%), Postives = 71/101 (70.30%), Query Frame = 0
Query:    1 MADSWEDEDFDTPSI--PLAAPTSWEDEEEEDEAPKVAAAGVAPKMSAAAXARKAAETDAKLAAEVEMRLQANETAEERRMRERNQVEEADNALTEHLFGG 99
            MADSWEDE+FD PS   P A P SWEDEEE+ E     A G+APKMSAA  A         +AAE+E RLQ  ETAE+RR+RERN+VEEADN LTE LFGG
Sbjct:    1 MADSWEDEEFDLPSSVPPTAVPVSWEDEEEDQEDAGAVAPGLAPKMSAAKAAXXXXXXXXXIAAELETRLQLGETAEQRRLRERNRVEEADNDLTEDLFGG 101          
BLAST of mRNA_S-ischiensis_contig77.19007.1 vs. uniprot
Match: A0A7S2C417_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2C417_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 3.510e-10
Identity = 43/104 (41.35%), Postives = 65/104 (62.50%), Query Frame = 0
Query:    1 MADSWEDEDFDTPSIPLAAP---TSWEDEEEEDEAPKVAAAGVAPKMSAAAXARKAAETDAKLAAEVEMRLQANETAEERRMRERNQVEEADNALTEHLFGGKA 101
            M D+W+D++F+   +    P   ++W+DEEE  E P +   G APK+SA   A+   + +AK   ++E  LQ  ET +ERR+RER ++E AD+ LT+ LFGG A
Sbjct:    1 MGDAWDDDEFEVSDLNGGFPPPVSNWDDEEE-FEPPPLPGHGEAPKLSAEKQAKLKNQKNAKKRNDLESALQEEETDDERRLRERLEIENADHELTDDLFGGGA 103          
BLAST of mRNA_S-ischiensis_contig77.19007.1 vs. uniprot
Match: A0A482SU57_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SU57_9ARCH)

HSP 1 Score: 62.4 bits (150), Expect = 1.560e-9
Identity = 43/101 (42.57%), Postives = 61/101 (60.40%), Query Frame = 0
Query:    1 MADSWEDEDFDTPSIP--LAAPTSWEDEEEEDEAPKVAAAGVAPKMSAAAXARKAAETDAKLAAEVEMRLQANETAEERRMRERNQVEEADNALTEHLFGG 99
            M DSWEDEDF+ P+I   L++  +  D++EEDE  K +    +P   +A   ++ AE     AA+++  L ANET E++R+RER Q EEAD  L   LF G
Sbjct:    1 MGDSWEDEDFEVPAIANALSSLKAKNDDDEEDETLKQSETVFSPITKSAGVLKREAEEAELRAAKMQESLHANETGEQKRIRERKQAEEADTKLAGDLFAG 101          
BLAST of mRNA_S-ischiensis_contig77.19007.1 vs. uniprot
Match: A0A7S2C3N7_9STRA (Hypothetical protein n=2 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C3N7_9STRA)

HSP 1 Score: 52.0 bits (123), Expect = 1.310e-5
Identity = 39/101 (38.61%), Postives = 55/101 (54.46%), Query Frame = 0
Query:    1 MADSWEDEDFDTPSIPLAAPTSWEDEEE--EDEAPKVAAAGVAPKMSAAAXARKAAETDAKLAAEVEMRLQANETAEERRMRERNQVEEADNALTEHLFGG 99
            M D+W+D++F+ P +    P          E E   + + G APK+SA   A+   E  A+  A +E  LQ  ET  ERR+R R++VEEAD+ LTE L  G
Sbjct:   38 MGDAWDDDEFEAPDLSQMGPXXXXXXXXXXEFEPQPLVSHGEAPKLSAEKQAKIDQEARARKEAAIENALQDGETEAERRLRIRDEVEEADHELTEELLAG 138          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig77.19007.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G0I5_ECTSI4.700e-2562.38Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2C417_9STRA3.510e-1041.35Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A482SU57_9ARCH1.560e-942.57Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A7S2C3N7_9STRA1.310e-538.61Hypothetical protein n=2 Tax=Florenciella parvula ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 71..91
IPR013906Eukaryotic translation initiation factor 3 subunit JPFAMPF08597eIF3_subunitcoord: 4..99
e-value: 1.4E-8
score: 35.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig77contigS-ischiensis_contig77:199920..202805 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig77.19007.1mRNA_S-ischiensis_contig77.19007.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig77 199728..202805 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig77.19007.1 ID=prot_S-ischiensis_contig77.19007.1|Name=mRNA_S-ischiensis_contig77.19007.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=101bp
MADSWEDEDFDTPSIPLAAPTSWEDEEEEDEAPKVAAAGVAPKMSAAAAA
RKAAETDAKLAAEVEMRLQANETAEERRMRERNQVEEADNALTEHLFGGK
A
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013906eIF3j