prot_S-ischiensis_contig77.19000.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig77.19000.1
Unique Nameprot_S-ischiensis_contig77.19000.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length297
Homology
BLAST of mRNA_S-ischiensis_contig77.19000.1 vs. uniprot
Match: D8LTJ2_ECTSI (Rab7L, RAB family GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTJ2_ECTSI)

HSP 1 Score: 320 bits (821), Expect = 1.690e-105
Identity = 166/226 (73.45%), Postives = 184/226 (81.42%), Query Frame = 0
Query:   69 ARQRPQKPRVLLKIIVLGCSNVGKTSLMKRYVANDFTGLRRPTIGADFMTKEIVVGDQPMLLQIWDTAGQERFHKEALGPGFFRGANAALLVYDVASAKSFEQVAMWREELLVKVDVDPYDFPIVVVGNKVDLEGGVLMDGVHGVDKAVVHKWTTMQGMGHIETSAKDGTGVEVAMEAVAGLALEQKIRRDAVLAANPNKHNSRGAGKVDLTRRGSMDDMKANGCC 294
            +RQR  KPRVLLKI+VLGCSNVGKTSLMKRY A DFT  RRPTIGADFMTKE+V GDQPMLLQIWDTAGQERFH  +LG GFFRGANAALLVYDVA A SFEQVAMWREELLV++DVDP+DFPIVV+GNKVDL  G+ MDG+HGVDK  V KW  MQGMGHIETSAKDGTGVEVAM+AVA LALEQK +R+  LA NP+     G   +DL  + +    +  GCC
Sbjct:  143 SRQRQMKPRVLLKIVVLGCSNVGKTSLMKRYAAGDFTDYRRPTIGADFMTKEVVEGDQPMLLQIWDTAGQERFHGGSLGSGFFRGANAALLVYDVACAVSFEQVAMWREELLVRLDVDPHDFPIVVIGNKVDLATGLAMDGIHGVDKTRVMKWCEMQGMGHIETSAKDGTGVEVAMQAVAVLALEQKRKRERDLALNPSLG---GGTTLDLADQRARQ-QRTGGCC 364          
BLAST of mRNA_S-ischiensis_contig77.19000.1 vs. uniprot
Match: A0A7S2RVV0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RVV0_9STRA)

HSP 1 Score: 231 bits (588), Expect = 1.710e-71
Identity = 115/179 (64.25%), Postives = 137/179 (76.54%), Query Frame = 0
Query:   77 RVLLKIIVLGCSNVGKTSLMKRYVANDFTGLRRPTIGADFMTKEIVVGDQPMLLQIWDTAGQERFHKEALGPGFFRGANAALLVYDVASAKSFEQVAMWREELLVKVDVDPYDFPIVVVGNKVDLEGGVLMDGVHGVDKAVVHKWTTMQGMGHIETSAKDGTGVEVAMEAVAGLALEQK 255
            RV+LKIIVLG SNVGKTSLM+R+  N F+  RR T GADF +K +    Q ++LQIWDTAGQERFH   LG  F+RGA+AALLVYD  SA SF+QV  WR E+L ++DV P DFP+VVVGNKVD+EG   MDG+HGVDKA V +W    G GHIETSAKDGTGV+VAMEA+  LAL ++
Sbjct:    4 RVVLKIIVLGSSNVGKTSLMRRFCKNSFSEARRATTGADFSSKRMSFAGQEVMLQIWDTAGQERFHHGTLGGAFYRGADAALLVYDATSASSFKQVENWRSEVLSRIDVAPGDFPLVVVGNKVDMEGNTPMDGIHGVDKAAVTEWCRAHGTGHIETSAKDGTGVQVAMEAIGTLALARR 182          
BLAST of mRNA_S-ischiensis_contig77.19000.1 vs. uniprot
Match: F0Y7J9_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y7J9_AURAN)

HSP 1 Score: 187 bits (475), Expect = 2.560e-55
Identity = 102/182 (56.04%), Postives = 126/182 (69.23%), Query Frame = 0
Query:   79 LLKIIVLGCSNVGKTSLMKRYVANDFTGLRRPTIGADFMTKEIVVGDQPMLLQIWDTAGQERFHKEALGPGFFRGANAALLVYDVASAKSFEQVAMWREELLVKVDVDPYDFPIVVVGNKVDLEGGVLMDGVHGVDKAVVHKWTTMQGMGHIETSAKDGTGVEVAMEAVAGLALEQKIRRDA 260
            LLK +VLG SNVGKTSL+ ++V   FT  RR T GADF +K + +GD+ + L IWDTAGQERFH   LG  F+RGA+AALLVYD    ++FEQ+ MWR ELL ++D  P +FP+VVVGNKVD+      +     ++A V +W    G+G   TSAKDGTGV VAMEAVA LALE K RR A
Sbjct:   10 LLKCVVLGSSNVGKTSLLMQFVHGKFTPARRVTTGADFASKVLHLGDREVRLVIWDTAGQERFHHGTLGGAFYRGADAALLVYDTTDIRTFEQIEMWRRELLQRIDGPPEEFPVVVVGNKVDVP-----NKTREHEQAAVVRWCRDLGIGLCLTSAKDGTGVAVAMEAVAMLALENKRRRQA 186          
BLAST of mRNA_S-ischiensis_contig77.19000.1 vs. uniprot
Match: A0A8J2S8J0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S8J0_9STRA)

HSP 1 Score: 176 bits (447), Expect = 1.620e-50
Identity = 99/188 (52.66%), Postives = 120/188 (63.83%), Query Frame = 0
Query:   79 LLKIIVLGCSNVGKTSLMKRYVANDFTGLRRPTIGADFMTKEIVVGDQPMLLQIWDTAGQERFHKEALGPGFFRGANAALLVYDVASAKSFEQVAMWREELLVKVDVDPYDFPIVVVGNKVDLEGGVLMDGVHGVDKAVVHKWTTMQGMGHIETSAKDGTGVEVAMEAVAGLALEQKIRRDAVLAANP 266
            +LK +VLG SNVGK+SL++RY  N F   RR T+GADF +K I VG++ + L IWDTAGQERFH   +G  F+RGA+ ALLVYD     +F QV +WR ELL +VD  P  FPIV VGNK+DL      D     D+     W    G+G +  SA DGTGV VAMEAVA LALE K RR A+    P
Sbjct:   59 MLKCVVLGSSNVGKSSLLERYTKNSFRPERRVTLGADFASKVIEVGEERVRLVIWDTAGQERFHHGTIGGAFYRGADGALLVYDTTDFATFAQVELWRRELLQRVD-GPEAFPIVCVGNKMDLPCPTRSD-----DEKAAEAWCAAHGVGLLFASACDGTGVAVAMEAVAALALENKKRRQALGVTKP 240          
BLAST of mRNA_S-ischiensis_contig77.19000.1 vs. uniprot
Match: A0A7S3K3U1_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K3U1_9STRA)

HSP 1 Score: 174 bits (442), Expect = 2.880e-50
Identity = 99/225 (44.00%), Postives = 134/225 (59.56%), Query Frame = 0
Query:   71 QRPQKPRVLLKIIVLGCSNVGKTSLMKRYVANDFTGLRRPTIGADFMTKEIVVGD-QPMLLQIWDTAGQERFHKEALGPGFFRGANAALLVYDVASAKSFEQVAMWREELLVKVDVDPYDFPIVVVGNKVDLEGGVLMDGVHGVDKAVVHKWTTMQGMGHIETSAKDGTGVEVAMEAVAGLALEQKIRRDAVLAANPNKHNSRGAGKVDLTRRGSMDDMKANGCC 294
            ++ ++   LLK +VLG SNVGKTSL+ +++   F   RR T GADF ++ + +   + + L IWDTAGQERFH   LG  F+RGA+ ALLVYD    +SFEQ+ MWR ELL +V   P +FP+VVVGNK+D+            + A V KW    G+G   TSAKDGTGV  AMEA+A LA E K RR     ++ N  ++     +    RG++D   +  CC
Sbjct:    3 KKEERTTTLLKCVVLGSSNVGKTSLLTQFIHGRFDSTRRATTGADFASRVLEIDQGRKIRLVIWDTAGQERFHHGTLGNAFYRGADGALLVYDTTDIRSFEQIEMWRGELLQRVQGPPDEFPVVVVGNKIDIPSET-----RDSEFAAVQKWCRDLGIGICLTSAKDGTGVLAAMEAIAHLAYEAKQRRGKSSHSSLNDRDTLALDNIRRNNRGAVDSSSS--CC 220          
BLAST of mRNA_S-ischiensis_contig77.19000.1 vs. uniprot
Match: A4RVV4_OSTLU (Uncharacterized protein n=2 Tax=Ostreococcus sp. 'lucimarinus' TaxID=242159 RepID=A4RVV4_OSTLU)

HSP 1 Score: 170 bits (431), Expect = 8.420e-49
Identity = 98/200 (49.00%), Postives = 128/200 (64.00%), Query Frame = 0
Query:   77 RVLLKIIVLGCSNVGKTSLMKRYVANDFTGLRRPTIGADFMTKEIVVGDQPMLLQIWDTAGQERFHKEALGPGFFRGANAALLVYDVASAKSFEQVAMWREELLVKVDV-DPYDFPIVVVGNKVDLEGGVLMDGVHGVDKAVVHKWTTMQG-MGHIETSAKDGTGVEVAMEAVAGLALEQKIRRDAVLAANPNKHNSRGA 274
            R LLK+I+LG S VGKTSLM +YV N F+   + TIGADFMTKEIV+ D  + LQIWDTAGQERF  ++LG  F+RGA+  + VYDV SAKSFE +  WR E LV+    DP  FP+VVVGNK+D+E G   D    + +     W T +G + H E SAK+   V+ A EAVA  A++ +   + V   +    ++RGA
Sbjct:    5 RTLLKVIILGDSGVGKTSLMAQYVNNKFSKQYKATIGADFMTKEIVIDDTVVTLQIWDTAGQERF--QSLGVSFYRGADCVMCVYDVNSAKSFESLENWRNEFLVQASPSDPEKFPVVVVGNKIDVEDG--KDSKRVISEKKAKSWCTSKGGLMHFECSAKEDINVDAAFEAVARFAVQNEDAEEDVYLPDTVSIDTRGA 200          
BLAST of mRNA_S-ischiensis_contig77.19000.1 vs. uniprot
Match: A0A482SWX8_9ARCH (GTP-binding protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SWX8_9ARCH)

HSP 1 Score: 168 bits (426), Expect = 3.950e-48
Identity = 98/202 (48.51%), Postives = 127/202 (62.87%), Query Frame = 0
Query:   94 SLMKRYVANDFTGLRRPTIGADFMTKEIVVGDQPMLLQIWDTAGQERFHKEALGPGFFRGANAALLVYDVASAKSFEQVAMWREELLVKVDVDPYDFPIVVVGNKVDLEGGVLMDGVHGVDKAVVHKWTTMQGMGHIETSAKDGTGVEVAMEAVAGLALEQKIRRDAVLAANPNKHNSRGAGKVDLTRRGSMDDMKANGCCG 295
            S   R+    F+GLRRPT+G+DF TK++VV D  + LQIWDTAGQERF++ ++G  FFRGA+ ALLVYDV   KS EQ+A WREE L +   D Y FP+VV+GNK+D+   + ++    VD + V  W      GHIETSAKDG GVE AM A+ GLALE    R        N + + G  KV+L    S  ++K +GC G
Sbjct:    9 SSFDRFATGRFSGLRRPTVGSDFQTKKMVVHDVEVTLQIWDTAGQERFNQGSIGSAFFRGAHGALLVYDVNDEKSIEQIAQWREECLSRQLEDEY-FPMVVIGNKIDVREKIPVE--RRVDVSGVLTWCREHSYGHIETSAKDGHGVEAAMLAITGLALENMRNRQ-----RRNVNAAMGGEKVNLE---SKYEVKKSGCEG 199          
BLAST of mRNA_S-ischiensis_contig77.19000.1 vs. uniprot
Match: A0A454XN49_OSTTA (Apospory-associated protein n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A454XN49_OSTTA)

HSP 1 Score: 167 bits (422), Expect = 1.940e-47
Identity = 99/183 (54.10%), Postives = 119/183 (65.03%), Query Frame = 0
Query:   75 KPRVLLKIIVLGCSNVGKTSLMKRYVANDFTGLRRPTIGADFMTKEIVVGDQPMLLQIWDTAGQERFHKEALGPGFFRGANAALLVYDVASAKSFEQVAMWREELLVKVDV-DPYDFPIVVVGNKVDLEGGVLMDGVHGVDKAVVHKWTTMQG-MGHIETSAKDGTGVEVAMEAVAGLALEQK 255
            K R LLK+I+LG S VGKTSLM +YV N F+   + TIGADFMTKEI V D  + LQIWDTAGQERF  ++LG  F+RGA+  + VYDV SAKSFE +  WR E LV+    DP  FPIVVVGNK+D+E G     V    KA    W T +G + H E SAK+   V  A EAVA  A+E +
Sbjct:    4 KKRTLLKVIILGDSGVGKTSLMSQYVNNKFSKQYKATIGADFMTKEITVDDTVVTLQIWDTAGQERF--QSLGVSFYRGADCVMCVYDVNSAKSFESLENWRNEFLVQASPSDPDKFPIVVVGNKIDVEEGKESKRVISEKKA--KSWCTSKGGLMHFECSAKEDINVTAAFEAVARFAVESE 182          
BLAST of mRNA_S-ischiensis_contig77.19000.1 vs. uniprot
Match: A0A1U8PAD1_GOSHI (ras-related protein Rab7-like n=1 Tax=Gossypium hirsutum TaxID=3635 RepID=A0A1U8PAD1_GOSHI)

HSP 1 Score: 163 bits (413), Expect = 2.840e-46
Identity = 92/183 (50.27%), Postives = 120/183 (65.57%), Query Frame = 0
Query:   73 PQKPRVLLKIIVLGCSNVGKTSLMKRYVANDFTGLRRPTIGADFMTKEIVVGDQPMLLQIWDTAGQERFHKEALGPGFFRGANAALLVYDVASAKSFEQVAMWREELLVKVDV-DPYDFPIVVVGNKVDLEGGVLMDGVHGVDKAVVHKWTTMQG-MGHIETSAKDGTGVEVAMEAVAGLALE 253
            P + R LLK+I+LG S VGKTSLM +YV   F+   + TIGADF+TKE+   D+   LQIWDTAGQERF  ++LG  F+RGA+  +LVYDV S KSF+ +  WREE LV+    DP +FP VV+GNKVD+EGG       GV +     W   +G + + ETSAK+G  VE A + +A  AL+
Sbjct:    2 PSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERF--QSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLVQASPSDPENFPFVVLGNKVDVEGG----NSRGVSEKKARAWCASKGNIPYFETSAKEGVNVEEAFQCIAKNALK 178          
BLAST of mRNA_S-ischiensis_contig77.19000.1 vs. uniprot
Match: A0A0J9XGI8_GEOCN (Similar to Saccharomyces cerevisiae YML001W YPT7 Rab family GTPase n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9XGI8_GEOCN)

HSP 1 Score: 163 bits (413), Expect = 3.960e-46
Identity = 89/185 (48.11%), Postives = 127/185 (68.65%), Query Frame = 0
Query:   77 RVLLKIIVLGCSNVGKTSLMKRYVANDFTGLRRPTIGADFMTKEIVVGDQPMLLQIWDTAGQERFHKEALGPGFFRGANAALLVYDVASAKSFEQVAMWREELLVKVDV-DPYDFPIVVVGNKVDLEGGVLMDGVHGVDKAVVHKWTTMQG-MGHIETSAKDGTGVEVAMEAVAGLALEQKIRRD 259
            + LLK+I+LG S VGKTSLM+++V   FTG  + TIGADF+TKE+++ D+ + LQ+WDTAGQERF  ++LG  F+RGA+  +LVYDV +AKSFE + +WR+E L++ +  DP +FP VV+GNK+D+E     D    V K     +   +G + + ETSAK+  GVE A E +A  AL Q+  +D
Sbjct:    6 KALLKVIILGDSGVGKTSLMQQFVNKKFTGQYKATIGADFLTKELMLDDRKVTLQLWDTAGQERF--QSLGVAFYRGADCCVLVYDVNNAKSFETLEVWRDEFLIQANPNDPENFPFVVLGNKIDVE-----DNKRQVPKKKAQAYCASKGNLPYFETSAKEAVGVEQAFEVIARNALAQEEAQD 183          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig77.19000.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTJ2_ECTSI1.690e-10573.45Rab7L, RAB family GTPase n=2 Tax=Ectocarpus TaxID=... [more]
A0A7S2RVV0_9STRA1.710e-7164.25Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
F0Y7J9_AURAN2.560e-5556.04Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A8J2S8J0_9STRA1.620e-5052.66Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S3K3U1_9STRA2.880e-5044.00Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A4RVV4_OSTLU8.420e-4949.00Uncharacterized protein n=2 Tax=Ostreococcus sp. '... [more]
A0A482SWX8_9ARCH3.950e-4848.51GTP-binding protein n=1 Tax=archaeon TaxID=1906665... [more]
A0A454XN49_OSTTA1.940e-4754.10Apospory-associated protein n=2 Tax=Ostreococcus t... [more]
A0A1U8PAD1_GOSHI2.840e-4650.27ras-related protein Rab7-like n=1 Tax=Gossypium hi... [more]
A0A0J9XGI8_GEOCN3.960e-4648.11Similar to Saccharomyces cerevisiae YML001W YPT7 R... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 80..101
score: 38.97
coord: 103..119
score: 31.48
coord: 188..201
score: 48.7
coord: 121..143
score: 47.02
coord: 229..251
score: 33.32
NoneNo IPR availableSMARTSM00176ran_sub_2coord: 85..288
e-value: 0.0024
score: -0.6
NoneNo IPR availableSMARTSM00174rho_sub_3coord: 82..254
e-value: 7.7E-11
score: 19.4
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 80..254
e-value: 1.2E-52
score: 190.8
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 77..254
e-value: 3.9E-14
score: 63.0
NoneNo IPR availableGENE3D3.40.50.300coord: 68..282
e-value: 1.3E-50
score: 173.5
NoneNo IPR availablePANTHERPTHR24073:SF1067RAS-RELATED PROTEIN RABG2coord: 76..258
NoneNo IPR availablePANTHERPTHR24073FAMILY NOT NAMEDcoord: 76..258
NoneNo IPR availablePROSITEPS51419RABcoord: 75..294
score: 25.876
IPR001806Small GTPasePFAMPF00071Rascoord: 81..248
e-value: 5.1E-43
score: 146.5
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 81..246
e-value: 3.3E-25
score: 86.7
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 74..259

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig77contigS-ischiensis_contig77:122925..130430 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig77.19000.1mRNA_S-ischiensis_contig77.19000.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig77 122687..131550 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig77.19000.1 ID=prot_S-ischiensis_contig77.19000.1|Name=mRNA_S-ischiensis_contig77.19000.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=297bp
MVVDPDLQRAGARQARASAQAKGAPENRGKGKEPEGVGDDGATSTQTPNQ
GTVPPTPEEGPTRVGPIPARQRPQKPRVLLKIIVLGCSNVGKTSLMKRYV
ANDFTGLRRPTIGADFMTKEIVVGDQPMLLQIWDTAGQERFHKEALGPGF
FRGANAALLVYDVASAKSFEQVAMWREELLVKVDVDPYDFPIVVVGNKVD
LEGGVLMDGVHGVDKAVVHKWTTMQGMGHIETSAKDGTGVEVAMEAVAGL
ALEQKIRRDAVLAANPNKHNSRGAGKVDLTRRGSMDDMKANGCCGG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR005225Small_GTP-bd_dom
IPR027417P-loop_NTPase