prot_S-ischiensis_contig77.18993.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig77.18993.1
Unique Nameprot_S-ischiensis_contig77.18993.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length95
Homology
BLAST of mRNA_S-ischiensis_contig77.18993.1 vs. uniprot
Match: D8LJ51_ECTSI (N/a n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJ51_ECTSI)

HSP 1 Score: 100 bits (248), Expect = 1.580e-22
Identity = 55/74 (74.32%), Postives = 67/74 (90.54%), Query Frame = 0
Query:   18 LQNKRRLERNAREQKRSLKISQRIDDLRSILRRSGIQVKASKSSVLMEATSYIAHLQQRHARAEAERQQILQIL 91
            +QNKRRLERNAREQKRSLKISQRI+DLR +L + G+ VKASKS+VL EAT YIAHLQ++HA++EAER +ILQ+L
Sbjct:  267 VQNKRRLERNAREQKRSLKISQRIEDLRRMLSQFGVDVKASKSAVLSEATDYIAHLQRQHAQSEAERARILQLL 340          
BLAST of mRNA_S-ischiensis_contig77.18993.1 vs. uniprot
Match: A0A835Z815_9STRA (BHLH domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z815_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 1.860e-17
Identity = 50/83 (60.24%), Postives = 66/83 (79.52%), Query Frame = 0
Query:   10 GGPDRRKNLQNKRRLERNAREQKRSLKISQRIDDLRSILRRSGIQVKASKSSVLMEATSYIAHLQQRHARAEAERQQILQILQ 92
            GGP   K + +KRRLERNAREQ+RSLKISQ+ID+LR++LR+SG+ VK+SKS++L EAT  I  LQ+R A  E ER  +LQ++Q
Sbjct:   59 GGP---KPVVDKRRLERNAREQRRSLKISQKIDELRALLRQSGVMVKSSKSNILQEATQLICALQRRQALLEGERNHLLQLVQ 138          
BLAST of mRNA_S-ischiensis_contig77.18993.1 vs. uniprot
Match: A0A835YRU1_9STRA (BHLH domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRU1_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 3.400e-14
Identity = 46/74 (62.16%), Postives = 56/74 (75.68%), Query Frame = 0
Query:   21 KRRLERNAREQKRSLKISQRIDDLRSILRRSGIQVKASKSSVLMEATSYIAHLQQRHARAEAERQQILQILQTM 94
            KRRLERNAREQKRSLKISQRID+LR +LR+SGI VK SKS VL E T+ I  L ++    EAER  +L ++Q +
Sbjct:   20 KRRLERNAREQKRSLKISQRIDELRLLLRQSGISVKNSKSHVLQEGTNLIKLLLRQQGALEAERAHMLGLVQML 93          
BLAST of mRNA_S-ischiensis_contig77.18993.1 vs. uniprot
Match: A0A7S1XXW7_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XXW7_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 2.300e-13
Identity = 47/73 (64.38%), Postives = 53/73 (72.60%), Query Frame = 0
Query:   21 KRRLERNAREQKRSLKISQRIDDLRSILRRSGIQVKASKSSVLMEATSYIAHLQQRHARAEAERQQILQILQT 93
            KRR ERN REQKRSLKIS++ID+L  IL  SG  VKA+KSS+L EA SYI HLQ   AR E ER Q + IL T
Sbjct:  101 KRRQERNHREQKRSLKISRKIDELHEILTDSGRMVKANKSSILREAFSYIMHLQGVLARKEYERSQFVNILTT 173          
BLAST of mRNA_S-ischiensis_contig77.18993.1 vs. uniprot
Match: A0A7S3KX76_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3KX76_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 3.140e-10
Identity = 39/80 (48.75%), Postives = 59/80 (73.75%), Query Frame = 0
Query:   14 RRKNLQNKRRLERNAREQKRSLKISQRIDDLRSILRRSGIQV-KASKSSVLMEATSYIAHLQQRHARAEAERQQILQILQ 92
            R+K L  ++R+ERNARE++RS +IS++I++LR +L   G+ V K +KSSVL EA +YI  LQQ   R+E +R Q++Q +Q
Sbjct:  227 RKKRLDERKRVERNAREKERSFRISKQINELRGLLSSGGVIVPKGTKSSVLTEAANYIRMLQQHQYRSEIDRHQLIQQMQ 306          
BLAST of mRNA_S-ischiensis_contig77.18993.1 vs. uniprot
Match: A0A7R9U539_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U539_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 5.870e-10
Identity = 38/71 (53.52%), Postives = 50/71 (70.42%), Query Frame = 0
Query:   21 KRRLERNAREQKRSLKISQRIDDLRSILRRSGIQVKASKSSVLMEATSYIAHLQQRHARAEAERQQILQIL 91
            +RR ERN REQ+RSLKIS++ID+L  IL  SG  VK +KS++L +A  YI +LQ   AR E ER Q + +L
Sbjct:  156 RRRKERNQREQRRSLKISKKIDELHEILTGSGRNVKPNKSAILNDAHQYIQYLQSTMARKEFERNQFVDVL 226          
BLAST of mRNA_S-ischiensis_contig77.18993.1 vs. uniprot
Match: A0A7S2CTA7_9STRA (Hypothetical protein n=2 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CTA7_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 5.340e-9
Identity = 35/62 (56.45%), Postives = 45/62 (72.58%), Query Frame = 0
Query:   21 KRRLERNAREQKRSLKISQRIDDLRSILRRSGIQVKASKSSVLMEATSYIAHLQQRHARAEA 82
            KRRL+RNAREQ+RS KI+ +ID LR +LR +G  VK++KSSVL E   YI  LQ++    EA
Sbjct:  461 KRRLDRNAREQRRSKKITSQIDQLRQVLRAAGRPVKSNKSSVLSETADYIRDLQKKRQALEA 522          
BLAST of mRNA_S-ischiensis_contig77.18993.1 vs. uniprot
Match: A0A7S2PJE8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PJE8_9STRA)

HSP 1 Score: 55.1 bits (131), Expect = 7.710e-7
Identity = 32/68 (47.06%), Postives = 45/68 (66.18%), Query Frame = 0
Query:   21 KRRLERNAREQKRSLKISQRIDDLRSILRRSGIQVKASKSSVLMEATSYIAHLQQRHARAEAERQQIL 88
            KRR +RN REQ+RS KISQ+I +LR++L+ S I  K +K S+L+    YI  LQ R    + E Q++L
Sbjct:  138 KRRYDRNLREQQRSYKISQQIKNLRNVLQESNIPFKPNKYSILLSVVEYIKELQTRAVYLDQEHQKLL 205          
BLAST of mRNA_S-ischiensis_contig77.18993.1 vs. uniprot
Match: A0A7S3XZX8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XZX8_HETAK)

HSP 1 Score: 54.3 bits (129), Expect = 1.760e-6
Identity = 32/68 (47.06%), Postives = 48/68 (70.59%), Query Frame = 0
Query:   21 KRRLERNAREQKRSLKISQRIDDLRSILRRSGIQVKASKSSVLMEATSYIAHLQQRHARAEAERQQIL 88
            K+R +RN REQKRS+KIS++ID LR++L+ +G QVK +K +VL     Y+A L ++    + ER+Q L
Sbjct:   25 KKRKDRNMREQKRSVKISKQIDRLRALLQEAGAQVKPNKHAVLSGVVHYMAQLHKQAQALDLERRQWL 92          
BLAST of mRNA_S-ischiensis_contig77.18993.1 vs. uniprot
Match: A0A7S1BWH9_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BWH9_9STRA)

HSP 1 Score: 54.3 bits (129), Expect = 1.860e-6
Identity = 32/77 (41.56%), Postives = 49/77 (63.64%), Query Frame = 0
Query:   12 PDRRKNLQNKRRLERNAREQKRSLKISQRIDDLRSILRRSGIQVKASKSSVLMEATSYIAHLQQRHARAEAERQQIL 88
            P +  ++  KRR +RN REQ+RS KISQ+I +L+++L  S I  K +K S+L+    YI  LQ R    ++E Q++L
Sbjct:  111 PGKFASIDEKRRYDRNLREQQRSYKISQQIKELKTVLSNSNIPFKPNKFSILLSTAVYIKQLQSRAMLLDSEHQKLL 187          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig77.18993.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
D8LJ51_ECTSI1.580e-2274.32N/a n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJ51_ECT... [more]
A0A835Z815_9STRA1.860e-1760.24BHLH domain-containing protein n=1 Tax=Tribonema m... [more]
A0A835YRU1_9STRA3.400e-1462.16BHLH domain-containing protein n=1 Tax=Tribonema m... [more]
A0A7S1XXW7_9STRA2.300e-1364.38Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S3KX76_9STRA3.140e-1048.75Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A7R9U539_9STRA5.870e-1053.52Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S2CTA7_9STRA5.340e-956.45Hypothetical protein n=2 Tax=Florenciella parvula ... [more]
A0A7S2PJE8_9STRA7.710e-747.06Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]
A0A7S3XZX8_HETAK1.760e-647.06Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S1BWH9_9STRA1.860e-641.56Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 63..90
NoneNo IPR availableCOILSCoilCoilcoord: 14..41
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainSMARTSM00353finuluscoord: 27..79
e-value: 8.5E-6
score: 35.3
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPFAMPF00010HLHcoord: 22..74
e-value: 3.9E-10
score: 39.5
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPROSITEPS50888BHLHcoord: 21..73
score: 12.474
IPR036638Helix-loop-helix DNA-binding domain superfamilyGENE3D4.10.280.10coord: 17..95
e-value: 1.2E-11
score: 46.5
IPR036638Helix-loop-helix DNA-binding domain superfamilySUPERFAMILY47459HLH, helix-loop-helix DNA-binding domaincoord: 12..86

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig77contigS-ischiensis_contig77:73886..75237 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig77.18993.1mRNA_S-ischiensis_contig77.18993.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig77 73886..75237 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig77.18993.1 ID=prot_S-ischiensis_contig77.18993.1|Name=mRNA_S-ischiensis_contig77.18993.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=95bp
DGGGGYIGGGGPDRRKNLQNKRRLERNAREQKRSLKISQRIDDLRSILRR
SGIQVKASKSSVLMEATSYIAHLQQRHARAEAERQQILQILQTMQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011598bHLH_dom
IPR036638HLH_DNA-bd_sf