prot_S-ischiensis_contig74.18732.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig74.18732.1
Unique Nameprot_S-ischiensis_contig74.18732.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length115
Homology
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BLAST of mRNA_S-ischiensis_contig74.18732.1 vs. uniprot
Match: A0A6H5K749_9PHAE (WW domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K749_9PHAE)

HSP 1 Score: 57.0 bits (136), Expect = 4.650e-7
Identity = 26/60 (43.33%), Postives = 34/60 (56.67%), Query Frame = 0 
Query:    5 RPSHLRRRGVVAVILGFGLAAQ-LCAASSPNLPPGWSLHYHQGTPYYYNSDTGESVWEPP 63
            R  H  R    A  L   LA   L   + P++PPGW++H+ Q TPY+YN  TGE+ WE P
Sbjct:    4 RRRHSTRCWPRAAALALSLAGGCLSGVAPPSVPPGWTVHFQQDTPYFYNEKTGETTWEQP 63
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BLAST of mRNA_S-ischiensis_contig74.18732.1 vs. uniprot
Match: A0A6U5HU28_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A6U5HU28_9STRA)

HSP 1 Score: 50.8 bits (120), Expect = 2.830e-5
Identity = 26/55 (47.27%), Postives = 31/55 (56.36%), Query Frame = 0 
Query:   31 SSPNLPPGW--SLHYHQGTPYYYNSDTGESVWEPPTYQGARNPPPPGGRSDRRPQ 83
            S+P LPPGW  ++  H G PYY NS TGE+ W+PP       P PP     R PQ
Sbjct:   13 SAPGLPPGWIETIDPHSGRPYYANSSTGETSWDPP-----ERPWPPSAPDYRSPQ 62
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BLAST of mRNA_S-ischiensis_contig74.18732.1 vs. uniprot
Match: A0A7S4Q054_9DINO (Hypothetical protein (Fragment) n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4Q054_9DINO)

HSP 1 Score: 51.2 bits (121), Expect = 4.530e-5
Identity = 22/41 (53.66%), Postives = 26/41 (63.41%), Query Frame = 0 
Query:   33 PNLPPGWSLHYHQGTPYYYNSDTGESVWEPPTYQGARNPPP 73
            P LPPGW      G PYY+N D+GES+WEPP      +PPP
Sbjct:  419 PPLPPGWEAGLADGKPYYFNRDSGESMWEPPP---VGSPPP 456
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig74.18732.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5K749_9PHAE4.650e-743.33WW domain-containing protein n=1 Tax=Ectocarpus sp... [more]
A0A6U5HU28_9STRA2.830e-547.27Hypothetical protein (Fragment) n=1 Tax=Grammatoph... [more]
A0A7S4Q054_9DINO4.530e-553.66Hypothetical protein (Fragment) n=1 Tax=Alexandriu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001202WW domainSMARTSM00456ww_5coord: 34..65
e-value: 2.2E-4
score: 30.5
IPR001202WW domainPFAMPF00397WWcoord: 35..63
e-value: 1.2E-6
score: 28.5
IPR001202WW domainPROSITEPS50020WW_DOMAIN_2coord: 33..65
score: 13.142
NoneNo IPR availableGENE3D2.20.70.10coord: 30..68
e-value: 1.4E-10
score: 42.5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 26..30
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..30
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 14..25
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 31..115
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..30
score: 0.755
NoneNo IPR availableTMHMMTMhelixcoord: 13..35
IPR036020WW domain superfamilySUPERFAMILY51045WW domaincoord: 31..66

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig74contigS-ischiensis_contig74:6896..7370 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig74.18732.1mRNA_S-ischiensis_contig74.18732.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig74 6868..7370 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig74.18732.1 ID=prot_S-ischiensis_contig74.18732.1|Name=mRNA_S-ischiensis_contig74.18732.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=115bp
MGKRRPSHLRRRGVVAVILGFGLAAQLCAASSPNLPPGWSLHYHQGTPYY
YNSDTGESVWEPPTYQGARNPPPPGGRSDRRPQAGRGPDPGVGQPTGAGG
SSGAGRGGSKGGGGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001202WW_dom
IPR036020WW_dom_sf