prot_S-ischiensis_contig73.18653.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig73.18653.1
Unique Nameprot_S-ischiensis_contig73.18653.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length184
Homology
BLAST of mRNA_S-ischiensis_contig73.18653.1 vs. uniprot
Match: D8LIM3_ECTSI (ClpS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIM3_ECTSI)

HSP 1 Score: 134 bits (338), Expect = 2.420e-36
Identity = 86/189 (45.50%), Postives = 109/189 (57.67%), Query Frame = 0
Query:    1 MGGTWRIALLCLLAL-QGTAAFL--APGIPGAGAAARGSRWARSA--PSHSAARQVPV---------------CLAPGSKVGKAKVDLRTSTKEIAAPKQDGASQKTRQKTKKTTRVNEEEDMPMFRVNLLGDEAYPREHVIMSIQDIIPETDSVRAAEVFEEAQASGKGLCGIFDEEQSELYVEQFSR 169
            MGG+WR+    L A   GT  F+  AP +P  GAAA   R   +A  P ++A   V                 CLAPG KVG+AKV L  +   +AAPK + A                 ED PMF+V ++GDE Y REHV+MSIQDI+P+TD+ RAAE+FEEAQ  GKG CG + EE++ELYVEQF+R
Sbjct:    1 MGGSWRVGFALLSAFASGTTGFVLKAP-LPNNGAAASAVRRPATAACPLYAARSTVAAGSDGVAAPPPRTPWTCLAPGGKVGRAKVSLERAVTSVAAPKSESAXXXXXXXXXXXXXXXXXEDAPMFQVLVIGDEEYNREHVVMSIQDIVPDTDNTRAAEIFEEAQEGGKGFCGTYPEEEAELYVEQFTR 188          
BLAST of mRNA_S-ischiensis_contig73.18653.1 vs. uniprot
Match: A0A836C8I8_9STRA (ClpS domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8I8_9STRA)

HSP 1 Score: 130 bits (328), Expect = 1.320e-35
Identity = 74/131 (56.49%), Postives = 93/131 (70.99%), Query Frame = 0
Query:   46 SAARQVPVCLAPGSKVGKAKVDLRTSTKEIAAPKQ-------DGASQKTRQKTKKTTRVNEEEDMPMFRVNLLGDEAYPREHVIMSIQDIIPETDSVRAAEVFEEAQASGKGLCGIFDEEQSELYVEQFSR 169
            +A R   V LAPGSKVGKAKV L+ S   +A PK+       DGA  K +Q+     RV E ED PM++V LLGDE Y REHVIM+IQDIIPETD+ ++ E+FEEAQ +G G+CG+F EE +ELYV+QF+R
Sbjct:   14 TAHRSPTVALAPGSKVGKAKVQLQKSL-SLAQPKEEAQKAATDGAKAKPKQR-----RVTESEDCPMYKVLLLGDEGYEREHVIMAIQDIIPETDNKKSTEIFEEAQKTGTGMCGVFPEEHAELYVQQFTR 138          
BLAST of mRNA_S-ischiensis_contig73.18653.1 vs. uniprot
Match: A0A7S0ZCQ5_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZCQ5_9RHOD)

HSP 1 Score: 73.6 bits (179), Expect = 3.990e-13
Identity = 46/116 (39.66%), Postives = 65/116 (56.03%), Query Frame = 0
Query:   55 LAPGSKVGKAKVDLRTSTKEIAAP-KQDGASQKTRQKTKKTTRVNEEEDMPMFRVNLLGDEAYPREHVIMSIQDIIPETDSVRAAEVFEEAQASGKGLCGIFDEEQSELYVEQFSR 169
            LAPG KVGK KV +    K ++ P K+  A         K  R  E+E++P F+V LLGDE Y   HV+  +  I+ + +   AA VF  AQA+G  +  + +EEQ+E YV+Q  R
Sbjct:   46 LAPGVKVGKPKVSVSKDMKRLSEPVKEPEADPNAGSAKAKPRRKTEQEEIPKFKVILLGDEGYDEVHVVTQLVKIV-QLEKNEAARVFGVAQATGSEIVCVVNEEQAEFYVQQLKR 160          
BLAST of mRNA_S-ischiensis_contig73.18653.1 vs. uniprot
Match: A0A5J4Z5M8_PORPP (ATP-dependent Clp protease adapter protein ClpS n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z5M8_PORPP)

HSP 1 Score: 68.2 bits (165), Expect = 5.400e-11
Identity = 41/120 (34.17%), Postives = 68/120 (56.67%), Query Frame = 0
Query:   55 LAPGSKVGKAKVDLRTSTKEIAA-----PKQDGASQKTRQKTKKTTRVNEEEDMPMFRVNLLGDEAYPREHVIMSIQDIIPETDSVRAAEVFEEAQASGKGLCGIFDEEQSELYVEQFSR 169
            LAPG KVG+ K  ++  T  +       P+ D A+  +R K ++ T +   E++PM++V LLGDE Y   HV+  +  I+ + + + A  +F  AQA+G  +  + +EE +E YV+Q  R
Sbjct:   55 LAPGIKVGRPKTSIQKDTGRMTETKSPEPQADAAAGASRAKPRRETEM---EEIPMYKVILLGDEEYDEVHVVTQLMKIV-QLEQIEATRIFGVAQATGSEIVVVVNEELAEFYVQQLKR 170          
BLAST of mRNA_S-ischiensis_contig73.18653.1 vs. uniprot
Match: A0A7R9Z7A9_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9Z7A9_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 2.580e-10
Identity = 36/113 (31.86%), Postives = 66/113 (58.41%), Query Frame = 0
Query:   58 GSKVGKAKVDLRTSTKEIAAPKQDGASQKTRQKTKKTTRVNEEEDMPMFRVNLLGDEAYPREHVIMSIQDIIPETDSVRAAEVFEEAQASGKGLCGIFDEEQSELYVEQFSRA 170
            G+ + K KV  + + K     K+  + ++ R     + R  + ED P++++ LLGDE Y + HVI  +  ++ + D  +A+ +F++AQ SGK +CG +  E +E+Y EQ +R+
Sbjct:    1 GAAIAKPKVQTKQAVKTETRRKEK-SKRRVRASDPISRRDEKFEDAPLYKLMLLGDEEYDQAHVIERMCALLEDMDEDQASTIFDQAQISGKAMCGKYPYEHAEMYKEQLARS 112          
BLAST of mRNA_S-ischiensis_contig73.18653.1 vs. uniprot
Match: A0A7S2DD30_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DD30_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 1.070e-9
Identity = 36/123 (29.27%), Postives = 63/123 (51.22%), Query Frame = 0
Query:   49 RQVPVCLAPGSKVGKAKVDLRTSTKEIAA--PKQDGASQKTRQKTKKTTRVNEEEDMPMFRVNLLGDEAYPREHVIMSIQDIIPETDSVRAAEVFEEAQASGKGLCGIFDEEQSELYVEQFSR 169
            R VP          K K  ++T+  E+    PKQ+   +  + +  +TT   +  ++PMF V L+GDE Y +  V+ S+  ++P  ++ +A + + EAQ  G  +  +  EE +E YV+Q  R
Sbjct:   44 RLVPTSAGAAPANPKVKTKVKTAPPEVKTGPPKQETKKRALKNRQAQTTSKEQNSEIPMFNVVLIGDEEYDKGFVVQSLSQVMPFVENDKAEQCYLEAQEKGTSIVAVVHEESAEFYVQQLQR 166          
BLAST of mRNA_S-ischiensis_contig73.18653.1 vs. uniprot
Match: L1IZP3_GUITC (ClpS domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IZP3_GUITC)

HSP 1 Score: 57.4 bits (137), Expect = 2.370e-7
Identity = 36/119 (30.25%), Postives = 60/119 (50.42%), Query Frame = 0
Query:   62 GKAKVDLRTSTKEIAAPKQD-----GASQKTRQKTKKTT------RVNEEEDMPMFRVNLLGDEAYPREHVIMSIQDIIPETDSVRAAEVFEEAQASGKGLCGIFDEEQSELYVEQFSR 169
            G +++ ++ ++ +IA PK D     G +Q    K K         R  ++++ PM++V LLGD  Y + HV+  I  +IP         +F EAQ +G  +  +  EE +E YV+Q  R
Sbjct:    4 GVSRIGMQLASPQIAKPKVDIGHQLGTTQPEAGKPKVAKPKAAPKRKTQDDECPMYKVILLGDNEYEQSHVVTQITKLIPSISKEEGIRIFVEAQMTGSSVIIVCTEEHAEHYVQQLKR 122          
BLAST of mRNA_S-ischiensis_contig73.18653.1 vs. uniprot
Match: A0A7S0L192_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0L192_9EUKA)

HSP 1 Score: 57.0 bits (136), Expect = 7.100e-7
Identity = 31/70 (44.29%), Postives = 46/70 (65.71%), Query Frame = 0
Query:  101 EDMPMFRVNLLGDEAYPREHVIMSIQDIIPETDSV-RAAEVFEEAQASGKGLCGIFDEEQSELYVEQFSR 169
            EDMPM++V LLGDE Y  + V  ++  +IPE  +V +A E + EA+ +GK L  +  +E +ELY EQ +R
Sbjct:   95 EDMPMWKVILLGDEEYEEQPVCEALVRVIPELSNVMQAKERYREAEQTGKALLIVAPQEHAELYKEQLAR 164          
BLAST of mRNA_S-ischiensis_contig73.18653.1 vs. uniprot
Match: A0A7S0BIL2_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BIL2_9RHOD)

HSP 1 Score: 56.2 bits (134), Expect = 1.000e-6
Identity = 26/69 (37.68%), Postives = 42/69 (60.87%), Query Frame = 0
Query:  101 EDMPMFRVNLLGDEAYPREHVIMSIQDIIPETDSVRAAEVFEEAQASGKGLCGIFDEEQSELYVEQFSR 169
            +++PM++V LLGDE Y   HV   +  IIP+  S  A+ V+ EAQ +G  +  + ++E +E Y +Q  R
Sbjct:   78 DEIPMYKVILLGDEGYDEVHVTTQLMKIIPKFTSDEASRVYREAQNTGSSIVCVVNKEHAEFYAQQLRR 146          
BLAST of mRNA_S-ischiensis_contig73.18653.1 vs. uniprot
Match: A0A2V3IQ32_9FLOR (ATP-dependent Clp protease adapter protein ClpS n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQ32_9FLOR)

HSP 1 Score: 56.6 bits (135), Expect = 1.010e-6
Identity = 34/118 (28.81%), Postives = 62/118 (52.54%), Query Frame = 0
Query:   56 APGSKVGKAKVDLRTS----TKEIAAPKQDGASQKTRQKTKKTTRVNEEEDMPMFRVNLLGDEAYPREHVIMSIQDIIPETDSVRAAEVFEEAQASGKGLCGIFDEEQSELYVEQFSR 169
            AP +++G+ K  ++      T + + P+ D      + + ++ T+ +E   +PM++V LLGDE Y   HV+  +Q  + + +   A  +F EAQ SG  +  +  EE +E Y +Q  R
Sbjct:   54 APSTQIGRPKTSIKKDIGRVTSQPSEPQADAERGSAKARPRRKTQADE---VPMYKVILLGDEEYVEAHVVTQLQKTV-QLEKKDATRIFWEAQGSGSSIICVVCEEHAEFYAQQLKR 167          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig73.18653.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
D8LIM3_ECTSI2.420e-3645.50ClpS domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A836C8I8_9STRA1.320e-3556.49ClpS domain-containing protein n=1 Tax=Tribonema m... [more]
A0A7S0ZCQ5_9RHOD3.990e-1339.66Hypothetical protein (Fragment) n=1 Tax=Timspurcki... [more]
A0A5J4Z5M8_PORPP5.400e-1134.17ATP-dependent Clp protease adapter protein ClpS n=... [more]
A0A7R9Z7A9_9STRA2.580e-1031.86Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A7S2DD30_9STRA1.070e-929.27Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
L1IZP3_GUITC2.370e-730.25ClpS domain-containing protein n=1 Tax=Guillardia ... [more]
A0A7S0L192_9EUKA7.100e-744.29Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
A0A7S0BIL2_9RHOD1.000e-637.68Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A2V3IQ32_9FLOR1.010e-628.81ATP-dependent Clp protease adapter protein ClpS n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003769Adaptor protein ClpS, corePFAMPF02617ClpScoord: 103..176
e-value: 7.5E-8
score: 32.1
IPR014719Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-likeGENE3D3.30.1390.10coord: 79..179
e-value: 1.2E-8
score: 36.4
IPR014719Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-likeSUPERFAMILY54736ClpS-likecoord: 100..170
NoneNo IPR availablePANTHERPTHR33473FAMILY NOT NAMEDcoord: 68..169
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 23..31
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 32..183
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..31
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.893
NoneNo IPR availableTMHMMTMhelixcoord: 7..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig73contigS-ischiensis_contig73:330439..338341 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig73.18653.1mRNA_S-ischiensis_contig73.18653.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig73 329532..338436 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig73.18653.1 ID=prot_S-ischiensis_contig73.18653.1|Name=mRNA_S-ischiensis_contig73.18653.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=184bp
MGGTWRIALLCLLALQGTAAFLAPGIPGAGAAARGSRWARSAPSHSAARQ
VPVCLAPGSKVGKAKVDLRTSTKEIAAPKQDGASQKTRQKTKKTTRVNEE
EDMPMFRVNLLGDEAYPREHVIMSIQDIIPETDSVRAAEVFEEAQASGKG
LCGIFDEEQSELYVEQFSRARERQGPVCAPPRP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003769ClpS_core
IPR014719Ribosomal_L7/12_C/ClpS-like