prot_S-ischiensis_contig73.18717.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig73.18717.1
Unique Nameprot_S-ischiensis_contig73.18717.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length165
Homology
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BLAST of mRNA_S-ischiensis_contig73.18717.1 vs. uniprot
Match: A0A6H5KW24_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW24_9PHAE)

HSP 1 Score: 56.6 bits (135), Expect = 2.990e-6
Identity = 28/49 (57.14%), Postives = 32/49 (65.31%), Query Frame = 0 
Query:   89 LLGVGDEVEARFFLQGQGVWTTSWYRGRVTKVHPPTD-DSGSAVKRGDG 136
            LL  GD VEA+F L  Q VWTTSWYRG V+KV+P +  D GS    G G
Sbjct: 2009 LLKPGDSVEAQFLLDDQAVWTTSWYRGEVSKVNPASSGDGGSDSAAGGG 2057
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BLAST of mRNA_S-ischiensis_contig73.18717.1 vs. uniprot
Match: D8LBS8_ECTSI (HECT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBS8_ECTSI)

HSP 1 Score: 53.5 bits (127), Expect = 3.360e-5
Identity = 23/34 (67.65%), Postives = 26/34 (76.47%), Query Frame = 0 
Query:   89 LLGVGDEVEARFFLQGQGVWTTSWYRGRVTKVHP 122
            LL  GD VEA+F L  Q VWTTSWYRG V+KV+P
Sbjct:  468 LLKPGDSVEAQFLLADQAVWTTSWYRGEVSKVNP 501
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig73.18717.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KW24_9PHAE2.990e-657.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LBS8_ECTSI3.360e-567.65HECT domain-containing protein n=1 Tax=Ectocarpus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig73contigS-ischiensis_contig73:782502..782996 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig73.18717.1mRNA_S-ischiensis_contig73.18717.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig73 782502..782998 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig73.18717.1 ID=prot_S-ischiensis_contig73.18717.1|Name=mRNA_S-ischiensis_contig73.18717.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=165bp
GQEEEEEEEEEGNQEEMAPQPAWDPQGGPGAETDVNAPSSTTGSATGASP
APSIVAAAGPKTGALAGQMMPPLPLPMSQQQQQQQPGPLLGVGDEVEARF
FLQGQGVWTTSWYRGRVTKVHPPTDDSGSAVKRGDGFGGRGGRGGGGSCS
RGRSGSGAGAGHGGR
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