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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | mitochondrion |
| Exons | 3 |
| Model size | 1045 |
| Cds size | 873 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815566.3215134-UTR-S-ischiensis_contig106:82887..83058 | 1622815566.3215134-UTR-S-ischiensis_contig106:82887..83058 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig106 82888..83058 + |
| 1695739774.1826487-UTR-S-ischiensis_contig106:82887..83058 | 1695739774.1826487-UTR-S-ischiensis_contig106:82887..83058 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig106 82888..83058 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815566.3341138-CDS-S-ischiensis_contig106:83058..83250 | 1622815566.3341138-CDS-S-ischiensis_contig106:83058..83250 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig106 83059..83250 + |
| 1695739774.191782-CDS-S-ischiensis_contig106:83058..83250 | 1695739774.191782-CDS-S-ischiensis_contig106:83058..83250 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig106 83059..83250 + |
| 1622815566.3487313-CDS-S-ischiensis_contig106:83616..83877 | 1622815566.3487313-CDS-S-ischiensis_contig106:83616..83877 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig106 83617..83877 + |
| 1695739774.2028687-CDS-S-ischiensis_contig106:83616..83877 | 1695739774.2028687-CDS-S-ischiensis_contig106:83616..83877 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig106 83617..83877 + |
| 1622815566.3606708-CDS-S-ischiensis_contig106:84670..85090 | 1622815566.3606708-CDS-S-ischiensis_contig106:84670..85090 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig106 84671..85090 + |
| 1695739774.2107675-CDS-S-ischiensis_contig106:84670..85090 | 1695739774.2107675-CDS-S-ischiensis_contig106:84670..85090 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig106 84671..85090 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig106.1865.1 >prot_S-ischiensis_contig106.1865.1 ID=prot_S-ischiensis_contig106.1865.1|Name=mRNA_S-ischiensis_contig106.1865.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=291bp
MIARQRSKGSMVGPAMPGRAPSSTTPTPVRSGPVFEARKPATLPRSTSFA
SNSSPGEKKGNARTAEDFATAYQNSPRQPPPAHDPVWLAQPSMALGVSLS
VIGWATLLIGGAALNVGWFHLDYLCVGTSPSFGEFSFPISVRLGWSGFNI
LYETPAASGTATINSLASDDLSFWGDFTAGVCFSAAFLGLLCTVAFTLGG
GGRRKPVRRLMLLAAVAGLVGAAAVAAIPSAMFYLAVEEEVEKEAGDNAG
GGLAARVAGDIDPLLGGLFGWACEGQAFDPAPVWYSTAVGG back to topmRNA from alignment at S-ischiensis_contig106:82888..85090+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-ischiensis_contig106.1865.1 ID=mRNA_S-ischiensis_contig106.1865.1|Name=mRNA_S-ischiensis_contig106.1865.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=2203bp|location=Sequence derived from alignment at S-ischiensis_contig106:82888..85090+ (Schizocladia ischiensis KU_0333)
CCAGCCTCGCCGTCCCGTTGCTGCAGGGGCCCGGGACAGCCCCAGCGACC
CCTCAGATAGGCGAGGAGAGCGTTCTCCCTTTCTACGACACGGTGCTCGA
GCCTGGGGGTGCCTTGTGGTCCCGTGCGGCCGTGACAACGCTTTGTTCCT
AGACCGGACGATTGGGCAACAATGATCGCTAGGCAGAGGAGCAAGGGCAG
CATGGTCGGACCAGCAATGCCAGGGCGAGCGCCGAGCAGCACGACGCCGA
CTCCAGTGCGCTCCGGCCCGGTATTCGAGGCACGGAAGCCCGCGACGCTC
CCGCGATCGACATCCTTCGCCAGCAACTCCTCCCCGGGGGAAAAAAAAGG
AAACGCGCGAACGGTGAGAATCATGCTACTCTCATACCTCCCCTGGCGAG
CTTGCAGGGATTGGTGGTGCTTTGTGGGGCTGAATTGCTCTCTCGCTTTC
CATGTATGGGCGACAGTTTCTGTCCTCGCTCCCCGCTCTTGTGTACTATA
TTTGCAACGGGCCAAGCCAGCCGGAGGGAAGGTGCCTGGTGCTGTAGCCA
TTGCTTTACTGCTGCTGTTTGTGAGGCTCTCTGGCACCACAGGTTCTTTT
CCATCCAAGGGAGGAAGAGCGTTGATGAACTGAACACGGCGTACCATGTC
GGCTGATCAACAACCAATTTCCCATATGCAACGGTACTGCCCCCCGCTTT
CCCTCCCGCCCATGCCCTGCCATCCTCAGGCAGAAGACTTTGCTACGGCG
TACCAGAATTCCCCCAGGCAACCACCACCGGCCCACGATCCGGTATGGCT
GGCCCAGCCAAGCATGGCACTGGGGGTCTCTCTCTCAGTGATTGGCTGGG
CGACTCTCCTCATTGGGGGGGCGGCCCTGAATGTTGGCTGGTTTCACCTG
GACTACCTTTGCGTGGGCACTTCGCCCAGTTTCGGCGAGTTCAGCTTCCC
CATCAGTGTGCGCCTGGGCTGGTCAGGCTTCAACATATTGGTGAGTCCGT
CCGGTACAGAGATGGCACGGACCCGAGAACTGTGCATGTGATTCGGCTTC
TGGTAGGCTCTCGTACAACATGTGGACTCATTGGCTTGTGTTGCGATAGA
ACCTTGCGTGCTTGTTGTACTTGACAGCCCCAAGTCAAACTTCGGTTTTT
GCTGAATGTACTTACAGCAACATTATGTTTATGGTACAGTATACAGTACT
CTAGGCACCCGCTCCTGCTTGCGGGGTTCTGTGCCCTGCCCTCCTTGCCA
CGAGGCGTCTTGAGGTGAGCACCCACCTAGGTACTGTCCGCACTGTACAG
CAGTCTTCTAGTGTACCCTGTACTGTACTGTTCATCGTGCGGTACCTACT
ACTGTACAGTACAGTACCCCCGAAATCGTGCATGTACAATGAGCATAGGG
CGTGTTGCCTACTGCAGTGCAATTTGTAGAGTGCTTTTACCAGTTAAGGG
TGCCGCGTGCCACAAGTGGTTGCAGTAGTACTGCAGTACTAGTAGTACAG
TAGCACTGTACAGTAGCACAGCAAAGCACAGCACAGCAGTGTACTGTACT
GGTGCGGTTCCGAGTGCCCTGTGCACGTACTTTGAAGTACTTGTACAACT
GCAGTGCAGTACAGTACAGCTTTGTAGCCGAGCCAAGGCTGCCCATGGCA
CTATCAATTTCGCCTGCTGCTTCATCATCCCACATGTCCCCGTGCGCCCA
TTACAGCAACCGTACACAACCACCACGCCTGCGCCAACCCGCCCCACCCA
CCCCGCACCCTCCCCCACACGCCTCTCCCTCAGTACGAAACCCCGGCCGC
GAGCGGGACGGCCACCATCAACAGCCTCGCCTCGGATGACCTGTCCTTTT
GGGGCGACTTCACCGCCGGCGTCTGTTTCTCCGCGGCCTTTCTGGGCCTC
CTCTGCACCGTGGCCTTCACACTCGGCGGTGGGGGAAGGCGAAAGCCCGT
ACGGAGGCTCATGCTCTTGGCGGCCGTGGCGGGCCTGGTGGGGGCCGCGG
CCGTCGCGGCCATCCCCTCCGCCATGTTTTACCTCGCCGTGGAGGAGGAG
GTTGAAAAGGAGGCGGGAGACAATGCGGGGGGTGGGCTGGCCGCCAGAGT
CGCCGGGGATATTGATCCCCTGCTCGGGGGCCTGTTTGGCTGGGCGTGCG
AGGGGCAGGCGTTTGATCCGGCGCCCGTGTGGTACTCGACGGCGGTTGGC
GGG back to topCoding sequence (CDS) from alignment at S-ischiensis_contig106:82888..85090+ >mRNA_S-ischiensis_contig106.1865.1 ID=mRNA_S-ischiensis_contig106.1865.1|Name=mRNA_S-ischiensis_contig106.1865.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1746bp|location=Sequence derived from alignment at S-ischiensis_contig106:82888..85090+ (Schizocladia ischiensis KU_0333)
ATGATCGCTAGGCAGAGGAGCAAGGGCAGCATGGTCGGACCAGCAATGCC
AGGGCGAGCGCCGAGCAGCACGACGCCGACTCCAGTGCGCTCCGGCCCGG
TATTCGAGGCACGGAAGCCCGCGACGCTCCCGCGATCGACATCCTTCGCC
AGCAACTCCTCCCCGGGGGAAAAAAAAGGAAACGCGCGAACGATGATCGC
TAGGCAGAGGAGCAAGGGCAGCATGGTCGGACCAGCAATGCCAGGGCGAG
CGCCGAGCAGCACGACGCCGACTCCAGTGCGCTCCGGCCCGGTATTCGAG
GCACGGAAGCCCGCGACGCTCCCGCGATCGACATCCTTCGCCAGCAACTC
CTCCCCGGGGGAAAAAAAAGGAAACGCGCGAACGGCAGAAGACTTTGCTA
CGGCGTACCAGAATTCCCCCAGGCAACCACCACCGGCCCACGATCCGGTA
TGGCTGGCCCAGCCAAGCATGGCACTGGGGGTCTCTCTCTCAGTGATTGG
CTGGGCGACTCTCCTCATTGGGGGGGCGGCCCTGAATGTTGGCTGGTTTC
ACCTGGACTACCTTTGCGTGGGCACTTCGCCCAGTTTCGGCGAGTTCAGC
TTCCCCATCAGTGTGCGCCTGGGCTGGTCAGGCTTCAACATATTGGCAGA
AGACTTTGCTACGGCGTACCAGAATTCCCCCAGGCAACCACCACCGGCCC
ACGATCCGGTATGGCTGGCCCAGCCAAGCATGGCACTGGGGGTCTCTCTC
TCAGTGATTGGCTGGGCGACTCTCCTCATTGGGGGGGCGGCCCTGAATGT
TGGCTGGTTTCACCTGGACTACCTTTGCGTGGGCACTTCGCCCAGTTTCG
GCGAGTTCAGCTTCCCCATCAGTGTGCGCCTGGGCTGGTCAGGCTTCAAC
ATATTGTACGAAACCCCGGCCGCGAGCGGGACGGCCACCATCAACAGCCT
CGCCTCGGATGACCTGTCCTTTTGGGGCGACTTCACCGCCGGCGTCTGTT
TCTCCGCGGCCTTTCTGGGCCTCCTCTGCACCGTGGCCTTCACACTCGGC
GGTGGGGGAAGGCGAAAGCCCGTACGGAGGCTCATGCTCTTGGCGGCCGT
GGCGGGCCTGGTGGGGGCCGCGGCCGTCGCGGCCATCCCCTCCGCCATGT
TTTACCTCGCCGTGGAGGAGGAGGTTGAAAAGGAGGCGGGAGACAATGCG
GGGGGTGGGCTGGCCGCCAGAGTCGCCGGGGATATTGATCCCCTGCTCGG
GGGCCTGTTTGGCTGGGCGTGCGAGGGGCAGGCGTTTGATCCGGCGCCCG
TGTGGTACTCGACGGCGGTTGGCGGGTACGAAACCCCGGCCGCGAGCGGG
ACGGCCACCATCAACAGCCTCGCCTCGGATGACCTGTCCTTTTGGGGCGA
CTTCACCGCCGGCGTCTGTTTCTCCGCGGCCTTTCTGGGCCTCCTCTGCA
CCGTGGCCTTCACACTCGGCGGTGGGGGAAGGCGAAAGCCCGTACGGAGG
CTCATGCTCTTGGCGGCCGTGGCGGGCCTGGTGGGGGCCGCGGCCGTCGC
GGCCATCCCCTCCGCCATGTTTTACCTCGCCGTGGAGGAGGAGGTTGAAA
AGGAGGCGGGAGACAATGCGGGGGGTGGGCTGGCCGCCAGAGTCGCCGGG
GATATTGATCCCCTGCTCGGGGGCCTGTTTGGCTGGGCGTGCGAGGGGCA
GGCGTTTGATCCGGCGCCCGTGTGGTACTCGACGGCGGTTGGCGGG back to top
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