mRNA_S-ischiensis_contig105.1835.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig105.1835.1 vs. uniprot
Match: A0A6H5L9W7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9W7_9PHAE) HSP 1 Score: 107 bits (267), Expect = 2.340e-22 Identity = 56/73 (76.71%), Postives = 64/73 (87.67%), Query Frame = 3
Query: 324 AFGGSAMPPDMAQWASAQLRKLSNGRCEVTLLEFCMSLSDASEVRQYLAAYLGSTPQVSSFATEFLQRKQASR 542
AFGGS M P MA WAS QL+K+S G+ ++TLLEFCMSL+DASE+RQYLAAYLGSTP+VSSFATEFLQRKQ R
Sbjct: 552 AFGGSGMSPAMASWASQQLKKMS-GKDDLTLLEFCMSLTDASEIRQYLAAYLGSTPEVSSFATEFLQRKQQGR 623
BLAST of mRNA_S-ischiensis_contig105.1835.1 vs. uniprot
Match: A0A835ZDV0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDV0_9STRA) HSP 1 Score: 96.7 bits (239), Expect = 1.880e-21 Identity = 49/66 (74.24%), Postives = 57/66 (86.36%), Query Frame = 3
Query: 342 MPPDMAQWASAQLRKLSNGRCEVTLLEFCMSLSDASEVRQYLAAYLGSTPQVSSFATEFLQRKQAS 539
MPPDMA WA A+L+KL G ++TLL+FCMS +DASEVR+ LAAYLGSTPQVSSFAT FLQRKQA+
Sbjct: 3 MPPDMAAWAQAELKKLGGGE-DITLLDFCMSSTDASEVREVLAAYLGSTPQVSSFATNFLQRKQAA 67
BLAST of mRNA_S-ischiensis_contig105.1835.1 vs. uniprot
Match: A0A2D4BK92_PYTIN (GYF domain-containing protein (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BK92_PYTIN) HSP 1 Score: 84.3 bits (207), Expect = 1.800e-14 Identity = 45/88 (51.14%), Postives = 62/88 (70.45%), Query Frame = 3
Query: 315 AAPAFGGSAMPPDMAQWASAQLRKLSNGRCEVTLLEFCMSLSDASEVRQYLAAYLGSTPQVSSFATEFLQRKQASRRAPQAKQAVAAD 578
AA +FG S+MP + W + L+ + NG ++TL+E+C +L D E+R+YLAAYLGSTP+VS+FATEF+QRK+ S P K A AD
Sbjct: 773 AAASFGSSSMPSEFMAWCAKNLKAI-NGSDDLTLVEYCATLEDPGEIREYLAAYLGSTPRVSAFATEFIQRKK-SLPTPSKKSATGAD 858
BLAST of mRNA_S-ischiensis_contig105.1835.1 vs. uniprot
Match: A0A8K1C681_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C681_PYTOL) HSP 1 Score: 83.2 bits (204), Expect = 4.590e-14 Identity = 44/88 (50.00%), Postives = 63/88 (71.59%), Query Frame = 3
Query: 327 FGGSAMPPDMAQWASAQLRKLSNGRCEVTLLEFCMSLSDASEVRQYLAAYLGSTPQVSSFATEFLQRKQASRRAPQAKQAVAADGWGT 590
FGGS++ D W + QL+ + NG ++TL+E+C +L D E+R+YLAAYLGSTP+VS+FATEF+QRK++ AP AK+ + GT
Sbjct: 927 FGGSSVSSDFMSWCAKQLKSI-NGSDDLTLVEYCATLEDPGEIREYLAAYLGSTPKVSAFATEFIQRKKS---APGAKKGSVSTEAGT 1010
BLAST of mRNA_S-ischiensis_contig105.1835.1 vs. uniprot
Match: A0A1V9ZGT2_9STRA (GYF domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZGT2_9STRA) HSP 1 Score: 81.6 bits (200), Expect = 1.520e-13 Identity = 43/91 (47.25%), Postives = 65/91 (71.43%), Query Frame = 3
Query: 324 AFGGSAMPPDMAQWASAQLRKLSNGRCEVTLLEFCMSLSDASEVRQYLAAYLGSTPQVSSFATEFLQRKQA----SRRAPQAKQAVAADGW 584
AFGGS + ++ W S QL+KL ++TL+++C +L D+ E+R+YLAAYLGSTP+VS+FATEF+QRK A ++ P+ K+A +D +
Sbjct: 984 AFGGSNLSDELMIWCSKQLKKLGATE-DLTLIQYCATLEDSGEIREYLAAYLGSTPKVSAFATEFIQRKNAMNKQAKSTPKRKKAQKSDSF 1073
BLAST of mRNA_S-ischiensis_contig105.1835.1 vs. uniprot
Match: A0A7S2WQB5_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WQB5_9STRA) HSP 1 Score: 80.9 bits (198), Expect = 2.800e-13 Identity = 43/87 (49.43%), Postives = 57/87 (65.52%), Query Frame = 3
Query: 327 FGGSAMPPDMAQWASAQLRKLSNGRCEVTLLEFCMSLSDASEVRQYLAAYLGSTPQVSSFATEFLQRKQASRRAPQAKQAVAADGWG 587
FGG M PDM +W Q+ KL +TL+EFC +L DAS++R+YL YLGSTPQVS+FA+EF+QRK+ K + +AD G
Sbjct: 1044 FGGKKMSPDMRKWCEGQVAKLG---ANMTLVEFCYALDDASDIREYLRDYLGSTPQVSAFASEFIQRKKGG------KHSFSADDGG 1121
BLAST of mRNA_S-ischiensis_contig105.1835.1 vs. uniprot
Match: A0A7S3HRN5_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HRN5_9STRA) HSP 1 Score: 79.7 bits (195), Expect = 6.240e-13 Identity = 38/74 (51.35%), Postives = 56/74 (75.68%), Query Frame = 3
Query: 327 FGGSAMPPDMAQWASAQLRKLSNGRCEVTLLEFCMSLSDASEVRQYLAAYLGSTPQVSSFATEFLQRKQASRRA 548
FGG M DMA W + QL++L G ++TL++FCMSL A EVR+YL+ YLGS+P++++FAT+F++ K+ RRA
Sbjct: 709 FGGKEMSKDMADWCATQLKRLK-GSDDLTLVQFCMSLDSAVEVREYLSEYLGSSPEITNFATDFIKYKEGGRRA 781
BLAST of mRNA_S-ischiensis_contig105.1835.1 vs. uniprot
Match: A0A7S0CDA8_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CDA8_9STRA) HSP 1 Score: 79.7 bits (195), Expect = 6.490e-13 Identity = 39/70 (55.71%), Postives = 51/70 (72.86%), Query Frame = 3
Query: 333 GSAMPPDMAQWASAQLRKLSNGRCEVTLLEFCMSLSDASEVRQYLAAYLGSTPQVSSFATEFLQRKQASR 542
G+ M P + W QLRKL+ G ++TL+ FCM+L D E++QYLAAYLGSTPQV+SFATEF+ RK +
Sbjct: 840 GARMSPSLENWCKDQLRKLAGGD-DLTLVSFCMTLKDPEEIQQYLAAYLGSTPQVTSFATEFINRKNGGK 908
BLAST of mRNA_S-ischiensis_contig105.1835.1 vs. uniprot
Match: K3X4C5_GLOUD (GYF domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X4C5_GLOUD) HSP 1 Score: 79.3 bits (194), Expect = 8.180e-13 Identity = 39/70 (55.71%), Postives = 55/70 (78.57%), Query Frame = 3
Query: 324 AFGGSAMPPDMAQWASAQLRKLSNGRCEVTLLEFCMSLSDASEVRQYLAAYLGSTPQVSSFATEFLQRKQ 533
AFG +A+ + WA+ Q + +S GR ++TL+E+C SL D E+R+YLAAYLGSTP+VS+FATEF+QRK+
Sbjct: 640 AFGNTAVSSEFMTWAAKQFQAIS-GREDLTLMEYCASLEDPGEIREYLAAYLGSTPRVSAFATEFIQRKK 708
BLAST of mRNA_S-ischiensis_contig105.1835.1 vs. uniprot
Match: A0A662WWB2_9STRA (GYF domain-containing protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WWB2_9STRA) HSP 1 Score: 78.6 bits (192), Expect = 1.530e-12 Identity = 40/71 (56.34%), Postives = 53/71 (74.65%), Query Frame = 3
Query: 324 AFGGSAMPPDMAQWASAQLRKLSNGRCEVTLLEFCMSLSDASEVRQYLAAYLGSTPQVSSFATEFLQRKQA 536
AFG S++ + WAS QL + + VTLLE+C S+ D E+R+YLAAYLGSTP+VS+FATEF+QRK+A
Sbjct: 659 AFGSSSVSSEFMTWASKQLSTI-DANANVTLLEYCASVEDPGEIREYLAAYLGSTPRVSAFATEFIQRKKA 728 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig105.1835.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig105.1835.1 >prot_S-ischiensis_contig105.1835.1 ID=prot_S-ischiensis_contig105.1835.1|Name=mRNA_S-ischiensis_contig105.1835.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=183bp MQQQQQQQHLLSHQQAMAPAQAMQPSGMSAAQQQADGRSLAAAQAAAAADback to top mRNA from alignment at S-ischiensis_contig105:113927..118379- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig105.1835.1 ID=mRNA_S-ischiensis_contig105.1835.1|Name=mRNA_S-ischiensis_contig105.1835.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=4453bp|location=Sequence derived from alignment at S-ischiensis_contig105:113927..118379- (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig105:113927..118379- >mRNA_S-ischiensis_contig105.1835.1 ID=mRNA_S-ischiensis_contig105.1835.1|Name=mRNA_S-ischiensis_contig105.1835.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1098bp|location=Sequence derived from alignment at S-ischiensis_contig105:113927..118379- (Schizocladia ischiensis KU_0333)back to top |