mRNA_S-ischiensis_contig104.1818.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig104.1818.1 vs. uniprot
Match: A0A6H5L2F5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L2F5_9PHAE) HSP 1 Score: 167 bits (424), Expect = 8.440e-49 Identity = 74/105 (70.48%), Postives = 93/105 (88.57%), Query Frame = 1
Query: 43 SVWNVPNILSMARVLVIPVFMLVFYSAFPLRNVWCAGIFAAASATDWLDGYIARRQGITTPFGSFLDPVADKLMVATALVLLSERLGTWMSVCTSITMCREIGVS 357
++WNVPNIL+MARV+ IPVF +FY++ P RN+WC+ IFA A+ TDWLDGYIARRQGI TPFGSFLDPVADKL+V+TAL+LLSERLG WM+VC++I +CRE+ +S
Sbjct: 154 TLWNVPNILTMARVMAIPVFATIFYASLPRRNIWCSAIFAGAAFTDWLDGYIARRQGIVTPFGSFLDPVADKLLVSTALILLSERLGPWMTVCSAIILCRELAIS 258
BLAST of mRNA_S-ischiensis_contig104.1818.1 vs. uniprot
Match: A0A835ZDG0_9STRA (CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDG0_9STRA) HSP 1 Score: 147 bits (371), Expect = 4.760e-42 Identity = 66/112 (58.93%), Postives = 88/112 (78.57%), Query Frame = 1
Query: 22 VAGSREVSVWNVPNILSMARVLVIPVFMLVFYSAFPLRNVWCAGIFAAASATDWLDGYIARRQGITTPFGSFLDPVADKLMVATALVLLSERLGTWMSVCTSITMCREIGVS 357
V G ++WNVPNIL++AR++ +P+ +FY+ RN+WCA +FA A+ TDWLDG+ AR+ I +PFG+FLDPVADKL+VA A++LLSERLG WM+VCTSI +CREI VS
Sbjct: 36 VEGVNTPTLWNVPNILTLARLICVPILGFLFYAPIANRNIWCAALFAGAAITDWLDGWWARKFNIASPFGAFLDPVADKLIVAVAMILLSERLGEWMTVCTSIILCREIAVS 147
BLAST of mRNA_S-ischiensis_contig104.1818.1 vs. uniprot
Match: W7TJV8_9STRA (Cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TJV8_9STRA) HSP 1 Score: 132 bits (331), Expect = 6.460e-35 Identity = 65/120 (54.17%), Postives = 93/120 (77.50%), Query Frame = 1
Query: 7 AAGPGVAGSR--EVSVWNVPNILSMARVLVIPVFMLVFYSAFPLRNVWCAGIFAAASATDWLDGYIARRQGITTPFGSFLDPVADKLMVATALVLLSERLGT-WMSVCTSITMCREIGVS 357
A G A +R E S+WN+PNIL++ RV+ IPV ++++Y++ RN C+G+F A+ TDWLDGY+ARR +++P G+FLDPVADKLMVATALVL+++RL + ++V T+I +CREIGVS
Sbjct: 141 AGGGNAASNRGNEPSLWNLPNILTLLRVISIPVLIIIYYTSASWRNAACSGLFVFAAMTDWLDGYLARRMNLSSPLGAFLDPVADKLMVATALVLMADRLNSPVVTVSTAIIICREIGVS 260
BLAST of mRNA_S-ischiensis_contig104.1818.1 vs. uniprot
Match: A0A7S2V0D2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0D2_9STRA) HSP 1 Score: 125 bits (315), Expect = 7.950e-34 Identity = 65/106 (61.32%), Postives = 81/106 (76.42%), Query Frame = 1
Query: 43 SVWNVPNILSMARVLVIPVFMLVFYSAFPLRNVWCAGIFAAASATDWLDGYIARRQGITTPFGSFLDPVADKLMVATALVLLSERLGTWM-SVCTSITMCREIGVS 357
++WN+PNIL+M RV+ IP+F VFY P RN A IFA ASATDWLDGY+AR+ IT+PFG+FLDPVADKLMVA+ALVLL+ G W+ +V +I + REI VS
Sbjct: 26 NLWNIPNILTMLRVVAIPIFAFVFYLPVPWRNKATAAIFAVASATDWLDGYLARKWKITSPFGAFLDPVADKLMVASALVLLAGSEGGWVVAVPAAIILAREITVS 131
BLAST of mRNA_S-ischiensis_contig104.1818.1 vs. uniprot
Match: UPI001A9F60D6 (CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=unclassified Pseudomonas TaxID=196821 RepID=UPI001A9F60D6) HSP 1 Score: 122 bits (306), Expect = 7.870e-33 Identity = 61/103 (59.22%), Postives = 82/103 (79.61%), Query Frame = 1
Query: 52 NVPNILSMARVLVIPVFMLVFYSAFPLRNVWCAGIFAAASATDWLDGYIARRQGITTPFGSFLDPVADKLMVATALVLLSE-RLGTWMSVCTSITMCREIGVS 357
N+PN+L++ RVL+IP+F+L+FYS+FP ++ + +FA A+ATDWLDGY+ARR G +TPFG+FLDPVADKLMVATALVLL E W+++ I + REI VS
Sbjct: 2 NIPNLLTLLRVLLIPIFILLFYSSFPASHLVASAVFALAAATDWLDGYLARRLGQSTPFGAFLDPVADKLMVATALVLLVEAHANLWLTLPAVIIIGREIVVS 104
BLAST of mRNA_S-ischiensis_contig104.1818.1 vs. uniprot
Match: A0A7S2UZN3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZN3_9STRA) HSP 1 Score: 125 bits (315), Expect = 1.080e-32 Identity = 65/106 (61.32%), Postives = 81/106 (76.42%), Query Frame = 1
Query: 43 SVWNVPNILSMARVLVIPVFMLVFYSAFPLRNVWCAGIFAAASATDWLDGYIARRQGITTPFGSFLDPVADKLMVATALVLLSERLGTWM-SVCTSITMCREIGVS 357
++WN+PNIL+M RV+ IP+F VFY P RN A IFA ASATDWLDGY+AR+ IT+PFG+FLDPVADKLMVA+ALVLL+ G W+ +V +I + REI VS
Sbjct: 139 NLWNIPNILTMLRVVAIPIFAFVFYLPVPWRNKATAAIFAVASATDWLDGYLARKWKITSPFGAFLDPVADKLMVASALVLLAGSEGGWVVAVPAAIILAREITVS 244
BLAST of mRNA_S-ischiensis_contig104.1818.1 vs. uniprot
Match: A0A7S4U8V2_GUITH (Hypothetical protein (Fragment) n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4U8V2_GUITH) HSP 1 Score: 119 bits (297), Expect = 2.550e-31 Identity = 62/112 (55.36%), Postives = 86/112 (76.79%), Query Frame = 1
Query: 31 SREVSVWNVPNILSMARVLVIPVFMLVFYSAFPLRNVWCAGIFAAASATDWLDGYIARRQGITTPFGSFLDPVADKLMVATALVLLS---ERLGTWMSVCTSITMCREIGVS 357
+++ +WN+PN+L+MARVL+IP+ + S++P RNV + IFA AS TD +DGY+ARR I++ FG+FLDPVADKLMVATALV LS R+G ++V ++IT+CREI VS
Sbjct: 9 AKDKHLWNLPNVLTMARVLMIPLMVAFLVSSYPGRNVVASVIFAVASLTDLVDGYLARRWKISSNFGAFLDPVADKLMVATALVFLSAGYSRVGGGVAVASAITICREIAVS 120
BLAST of mRNA_S-ischiensis_contig104.1818.1 vs. uniprot
Match: UPI001F4DA6FB (CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Pseudomonas sp. A3.4 TaxID=2919919 RepID=UPI001F4DA6FB) HSP 1 Score: 115 bits (287), Expect = 5.810e-30 Identity = 57/103 (55.34%), Postives = 77/103 (74.76%), Query Frame = 1
Query: 52 NVPNILSMARVLVIPVFMLVFYSAFPLRNVWCAGIFAAASATDWLDGYIARRQGITTPFGSFLDPVADKLMVATALVLLSE-RLGTWMSVCTSITMCREIGVS 357
N+PNIL++ RV +IPVF+++FY F + +FA A+ATDWLDGY+ARR G TTPFG+FLDPVADKL+VA ALV+L E W+++ ++ +CREI VS
Sbjct: 2 NIPNILTLLRVALIPVFVVLFYMPFSWSYWAASAVFALAAATDWLDGYLARRWGQTTPFGAFLDPVADKLIVAVALVMLVESHASLWLTIPAAVIICREIVVS 104
BLAST of mRNA_S-ischiensis_contig104.1818.1 vs. uniprot
Match: A0A1H2I4Z0_9PSED (CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Pseudomonas guangdongensis TaxID=1245526 RepID=A0A1H2I4Z0_9PSED) HSP 1 Score: 114 bits (286), Expect = 7.590e-30 Identity = 61/103 (59.22%), Postives = 76/103 (73.79%), Query Frame = 1
Query: 52 NVPNILSMARVLVIPVFMLVFYSAFPLRNVWCAGIFAAASATDWLDGYIARRQGITTPFGSFLDPVADKLMVATALVLL-SERLGTWMSVCTSITMCREIGVS 357
N+PN+L++ RVL+IPVF+ +FY F +G+FA ASATDWLDGY+ARR G +TPFG+FLDPVADKLMVA ALVLL E W+S+ I + REI VS
Sbjct: 2 NIPNLLTVLRVLLIPVFIALFYLPFSWSYWAASGVFALASATDWLDGYLARRLGQSTPFGAFLDPVADKLMVAVALVLLVEEHSSLWLSLPAMIIIGREIVVS 104
BLAST of mRNA_S-ischiensis_contig104.1818.1 vs. uniprot
Match: A0A370DFG8_9GAMM (CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=6 Tax=Bacteria TaxID=2 RepID=A0A370DFG8_9GAMM) HSP 1 Score: 114 bits (286), Expect = 1.020e-29 Identity = 54/104 (51.92%), Postives = 78/104 (75.00%), Query Frame = 1
Query: 49 WNVPNILSMARVLVIPVFMLVFYSAFPLRNVWCAGIFAAASATDWLDGYIARRQGITTPFGSFLDPVADKLMVATALVLLSERLGT-WMSVCTSITMCREIGVS 357
WN+PN+L++ R+++IPVF+L+FY + CA +FA A+ TDWLDG++ARR G +PFG+FLDPVADKLMVA AL+LL + T W+++ +I + REI +S
Sbjct: 2 WNIPNLLTLLRIVLIPVFVLIFYLPVEWARIGCAAVFALAAVTDWLDGFLARRWGQVSPFGAFLDPVADKLMVAVALLLLVQSEPTPWLALPAAIIIGREITIS 105 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig104.1818.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig104.1818.1 >prot_S-ischiensis_contig104.1818.1 ID=prot_S-ischiensis_contig104.1818.1|Name=mRNA_S-ischiensis_contig104.1818.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=120bp MPAAGPGVAGSREVSVWNVPNILSMARVLVIPVFMLVFYSAFPLRNVWCAback to top mRNA from alignment at S-ischiensis_contig104:333139..333960+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig104.1818.1 ID=mRNA_S-ischiensis_contig104.1818.1|Name=mRNA_S-ischiensis_contig104.1818.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=822bp|location=Sequence derived from alignment at S-ischiensis_contig104:333139..333960+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig104:333139..333960+ >mRNA_S-ischiensis_contig104.1818.1 ID=mRNA_S-ischiensis_contig104.1818.1|Name=mRNA_S-ischiensis_contig104.1818.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=720bp|location=Sequence derived from alignment at S-ischiensis_contig104:333139..333960+ (Schizocladia ischiensis KU_0333)back to top |