prot_S-ischiensis_contig104.1793.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig104.1793.1
Unique Nameprot_S-ischiensis_contig104.1793.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length185
Homology
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BLAST of mRNA_S-ischiensis_contig104.1793.1 vs. uniprot
Match: D8LCI9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCI9_ECTSI)

HSP 1 Score: 102 bits (254), Expect = 5.640e-22
Identity = 53/133 (39.85%), Postives = 81/133 (60.90%), Query Frame = 0 
Query:   50 KTLMERATPFFKTGVLREPEWWKAVAQVPPYVPRPYGYKLKEMRHPTDRLVRKHQDRNPQVLREPLWLG----HDGPPTLSHMFAKRQYALMQKGVPEEDAYAQAEAALSSDRQRDLEAVRRMVEEAAQAVGG 178
            KT +++ +   K G++  P+W+ A  QVPP+  RP    ++ ++ P D L  +   RNP ++ +P WLG      G P +SH+FAKRQYALMQ G+ +EDAY +  A +  +R  D+ AV++MV EA+   GG
Sbjct:    6 KTALQKVSVLVKAGMMEPPKWYAAAKQVPPFQRRPSNG-IEALKLPWDTLANEFASRNPHMVEDPEWLGPRGFRPGAPPISHVFAKRQYALMQNGLMKEDAYERTHALMKMERSADVAAVQKMVREASSMAGG 137
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig104.1793.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LCI9_ECTSI5.640e-2239.85Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR35693FAMILY NOT NAMEDcoord: 52..172

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig104contigS-ischiensis_contig104:12221..16726 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig104.1793.1mRNA_S-ischiensis_contig104.1793.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig104 12221..16726 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig104.1793.1 ID=prot_S-ischiensis_contig104.1793.1|Name=mRNA_S-ischiensis_contig104.1793.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=185bp
GCRGHRGRLSCNARGYTRPVKEEAVVVRPCLASDSLCACQNVMKRARLSK
TLMERATPFFKTGVLREPEWWKAVAQVPPYVPRPYGYKLKEMRHPTDRLV
RKHQDRNPQVLREPLWLGHDGPPTLSHMFAKRQYALMQKGVPEEDAYAQA
EAALSSDRQRDLEAVRRMVEEAAQAVGGGEGGAVE
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