prot_S-ischiensis_contig7.18223.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig7.18223.1
Unique Nameprot_S-ischiensis_contig7.18223.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length205
Homology
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BLAST of mRNA_S-ischiensis_contig7.18223.1 vs. uniprot
Match: A0A7R9U2P8_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U2P8_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 2.180e-11
Identity = 36/80 (45.00%), Postives = 45/80 (56.25%), Query Frame = 0 
Query:  105 VTSAHIQHVQSFRGQLSKREYWAAEMRGRWFIEEVAYFECVYGLFRDGLIADVKPGTRLCSFMAALLGCTMLRVRKKIVG 184
            + S H+  V   R Q      W AEMRGRWF EE  YF  +Y LF+DGL+ADV+ G     FM  +L C  +R+ KK  G
Sbjct:   18 IVSPHVSRVSILRRQGLLP--WTAEMRGRWFKEEFDYFNKMYTLFQDGLLADVEAGQAFREFMGDILACDTMRISKKFCG 95
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BLAST of mRNA_S-ischiensis_contig7.18223.1 vs. uniprot
Match: A0A835ZAU3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAU3_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 1.100e-8
Identity = 32/86 (37.21%), Postives = 46/86 (53.49%), Query Frame = 0 
Query:  109 HIQHVQSFRGQLSKREYWAAEMRGRWFIEEVAYFEC----------VYGLFRDGLIADVKPGTRLCSFMAALLGCTMLRVRKKIVG 184
            H +H++       + + W +EMRGRWF EEV YFE           V+ LF+DGL+  V+        MAA+L C ++R+ KK  G
Sbjct:  179 HSEHIKLACECKKREQMWGSEMRGRWFNEEVKYFEXXXXXXXXXXYVFELFKDGLLQHVETNVTFRELMAAVLQCEVMRISKKFTG 264
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig7.18223.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A7R9U2P8_9STRA2.180e-1145.00Hypothetical protein n=2 Tax=Pinguiococcus pyrenoi... [more]
A0A835ZAU3_9STRA1.100e-837.21Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.501

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig7contigS-ischiensis_contig7:2718456..2720278 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig7.18223.1mRNA_S-ischiensis_contig7.18223.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig7 2718456..2720371 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig7.18223.1 ID=prot_S-ischiensis_contig7.18223.1|Name=mRNA_S-ischiensis_contig7.18223.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=205bp
MLPCRKGVVVAAFAMTTSSLYLDPATGTAGTAWVCPRAPVHGAPRPCGQT
CRPWWSNGGHVSRRDRRRATPAVGRTACRGRVSQGSARMSKGPPSTPTPL
AAERVTSAHIQHVQSFRGQLSKREYWAAEMRGRWFIEEVAYFECVYGLFR
DGLIADVKPGTRLCSFMAALLGCTMLRVRKKIVGRPGRSGGSSSGGGNVT
GGSGG
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