prot_S-ischiensis_contig68.17804.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig68.17804.1
Unique Nameprot_S-ischiensis_contig68.17804.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length277
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig68.17804.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 172..192
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 193..240
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 139..160
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..43
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 161..171
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 261..277
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 241..260
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 44..64
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 65..138
NoneNo IPR availableTMHMMTMhelixcoord: 238..260
NoneNo IPR availableTMHMMTMhelixcoord: 94..116
NoneNo IPR availableTMHMMTMhelixcoord: 39..61
NoneNo IPR availableTMHMMTMhelixcoord: 171..193
NoneNo IPR availableTMHMMTMhelixcoord: 136..158

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig68contigS-ischiensis_contig68:1082553..1084856 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig68.17804.1mRNA_S-ischiensis_contig68.17804.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig68 1082553..1084858 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig68.17804.1 ID=prot_S-ischiensis_contig68.17804.1|Name=mRNA_S-ischiensis_contig68.17804.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=277bp
GRGGGGGRGDDAISVSGTTTGSDSSGGWFCNSCCGASSSLLFRLGLMAAL
PLLPSVLLFLLPWFRVEVTCDVFDTVVAAANDIPAYTTSNTYTVMWSRYG
LGSTANAIATSVLPAARGWDPLSDVGQHVSVAGTLAGGVASASAVAAVVL
AAVLTLLSGNHRSLGDASYMRLTWRCAIVLGVAMSVVGTVIFSSSTVSDF
RDQFEGSGSTPLVPPGDNGGSTTSATADGYKVCGTHTTPSLATFMNVVAW
AAWLALAAVVRRTGMDEVDRAIALAKG
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