mRNA_S-ischiensis_contig1.1171.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig1.1171.1 vs. uniprot
Match: D8LQ61_ECTSI (Methyltransf_25 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ61_ECTSI) HSP 1 Score: 120 bits (301), Expect = 1.860e-31 Identity = 65/119 (54.62%), Postives = 88/119 (73.95%), Query Frame = 3
Query: 114 ALLQHARDTFARQTTSTPIVAPISPSPQALIARVLEVLPLTDKDFVVDLGCGDGRWLVAAAQAAGCPCRGYDLNNALLSRARAAAQAAQLSALVSVEECDIFTASLSSATLVIVYLFRQ 470
AL+++A++TF T T +VAPISPSP++LI VL+ L L D VVDLGCGDGRWL+AAA+ GC RG DLN LL + R AA A++S+LV +++ DIF A L+ +T++IVYLFR+
Sbjct: 9 ALVKYAKETFVEHTRETSLVAPISPSPESLIETVLDGLRLEPHDIVVDLGCGDGRWLLAAARR-GCAGRGLDLNEDLLRKGRLAAAEARVSSLVELDKEDIFVAPLAGSTVIIVYLFRE 126
BLAST of mRNA_S-ischiensis_contig1.1171.1 vs. uniprot
Match: A0A7S1TVS2_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TVS2_9STRA) HSP 1 Score: 100 bits (248), Expect = 1.620e-23 Identity = 54/122 (44.26%), Postives = 80/122 (65.57%), Query Frame = 3
Query: 105 FKRALLQHARDTFARQTTSTPIVAPISPSPQALIARVLEVLPLTDKDFVVDLGCGDGRWLVAAAQAAGCPCRGYDLNNALLSRARAAAQAAQLSALVSVEECDIFTASLSSATLVIVYLFRQ 470
+ A++Q +++ FA + +T IVAPISP+P ++ VL+ + + D V+DLGCGDGRWLVAAA+A GC C GY+L + +++ A AA + ALV V DIF LS A++++ YLF
Sbjct: 10 LRAAIIQASKEAFAARE-NTIIVAPISPTPLPIVQAVLDKVSVNADDVVLDLGCGDGRWLVAAAEAYGCRCVGYELEDERIAKCGEAIAAAGVGALVEVRRQDIFEVDLSEASVLVFYLFSD 130
BLAST of mRNA_S-ischiensis_contig1.1171.1 vs. uniprot
Match: A0A8K1FDL0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FDL0_PYTOL) HSP 1 Score: 87.4 bits (215), Expect = 1.630e-18 Identity = 54/129 (41.86%), Postives = 72/129 (55.81%), Query Frame = 3
Query: 111 RALLQHARDTFARQTTST----PIVAPISPSPQALIARVLEVL-----PLTDKDFVVDLGCGDGRWLVAAAQAAGCPCRGYDLNNALLSRARAAAQAAQLSALVSVEECDIFTASLSSATLVIVYLFRQ 470
RALL HA A + P+ AP SPSP A+I V L PLT D +VDLGCGDGRWL++ Q C G +L+ AL+ RA+ A+L+ L+ V + DI +++AT VIVY F +
Sbjct: 18 RALLLHAAKARAPDVLALSKEKPLFAPYSPSPDAIIHAVWAFLETQQRPLTSADRLVDLGCGDGRWLISGVQRYNCSALGIELDPALVERAKQNVHLAELAHLIDVIQADIMATDITNATFVIVYAFAE 146
BLAST of mRNA_S-ischiensis_contig1.1171.1 vs. uniprot
Match: A0A662XNJ5_9STRA (Methyltransf_25 domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XNJ5_9STRA) HSP 1 Score: 85.1 bits (209), Expect = 9.730e-18 Identity = 50/116 (43.10%), Postives = 69/116 (59.48%), Query Frame = 3
Query: 138 TFARQTTSTPIVAPISPSPQALIARVLEVLP-----LTDKDFVVDLGCGDGRWLVAAAQAAGCPCRGYDLNNALLSRARAAAQAAQLSALVSVEECDIFTASLSSATLVIVYLFRQ 470
T + +TP+ AP SPSP A+I V L LT +D +VDLGCGDGRWLV+ Q C G +L+ AL++R +AA +A L + V++ D+ A +S A LVIVY F +
Sbjct: 41 TLKAEDATTPLFAPFSPSPLAVIDAVWTRLEEAQMALTPEDLLVDLGCGDGRWLVSGVQRFKCSALGVELDAALVARTQAAVRAQGLEHKIQVQQGDVMLADVSRARLVIVYAFAE 156
BLAST of mRNA_S-ischiensis_contig1.1171.1 vs. uniprot
Match: A0A7S1XND7_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XND7_9STRA) HSP 1 Score: 82.8 bits (203), Expect = 1.080e-17 Identity = 44/97 (45.36%), Postives = 66/97 (68.04%), Query Frame = 3
Query: 105 FKRALLQHARDTFARQTTSTPIVAPISPSPQALIARVLEVLPLTDKDFVVDLGCGDGRWLVAAAQAAGCPCRGYDLNNALLSRARAAAQAAQLSALV 395
+ A++Q +++ FA + +T IVAPISP+P ++ VL+ + + D V+DLGCGDGRWLVAAA+A GC C GY+L + +++ A AA + ALV
Sbjct: 10 LRAAIIQASKEAFAARE-NTIIVAPISPTPLPIVQAVLDKVSVNADDVVLDLGCGDGRWLVAAAEAYGCRCVGYELEDERIAKCGEAIAAAGVGALV 105
BLAST of mRNA_S-ischiensis_contig1.1171.1 vs. uniprot
Match: A0A7S1Z4D0_9STRA (Hypothetical protein (Fragment) n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1Z4D0_9STRA) HSP 1 Score: 82.8 bits (203), Expect = 1.310e-16 Identity = 47/143 (32.87%), Postives = 84/143 (58.74%), Query Frame = 3
Query: 102 RFKRALLQHARDTFARQ----------------TTSTPIVAPISPSPQALIARVLEVLPLTDKDFVVDLGCGDGRWLVAAAQAAGCPCRGYDLNNALLSRARAAAQAAQLSALVSVEECDIF----TASLSSATLVIVYLFRQ 470
R + AL+ A++ F +Q ++ +VAPISP+P+++I ++ +L L+ K ++DLGCGDGRW+++AA C C G D+++ L+ AR A + L V +++ D+F +++LS A ++++YLFR
Sbjct: 21 RIREALIAMAQNRFEQQQKXXXXXXXXESTNSSSSCVKLVAPISPTPKSVITSIISMLNLSSKSLLLDLGCGDGRWVISAAVECKCRCIGCDVDDERLALARQAVKDHGLECKVDIQKKDVFEVAKSSALSDADVIVMYLFRD 163
BLAST of mRNA_S-ischiensis_contig1.1171.1 vs. uniprot
Match: H3H806_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H806_PHYRM) HSP 1 Score: 79.7 bits (195), Expect = 9.070e-16 Identity = 49/120 (40.83%), Postives = 65/120 (54.17%), Query Frame = 3
Query: 126 HARDTFARQTTSTPIVAPISPSPQALIARVLEVLP-----LTDKDFVVDLGCGDGRWLVAAAQAAGCPCRGYDLNNALLSRARAAAQAAQLSALVSVEECDIFTASLSSATLVIVYLFRQ 470
HA T + ++ + AP SPSP A+I V L LT D +VDLGCGDGRWLV+ Q GC G +L+ L+ RAR L + V++ D+ A +S A LVIVY F +
Sbjct: 21 HAALTLQGEQGNSELFAPFSPSPVAVIDAVWRKLEEKQVQLTPGDLLVDLGCGDGRWLVSGVQRFGCNAFGVELDENLVKRARDQVTQQNLQLQIRVDQGDVMLADISDAKLVIVYAFAE 140
BLAST of mRNA_S-ischiensis_contig1.1171.1 vs. uniprot
Match: A0A517Y2A7_9BACT (Methyltransferase domain protein n=1 Tax=Urbifossiella limnaea TaxID=2528023 RepID=A0A517Y2A7_9BACT) HSP 1 Score: 79.3 bits (194), Expect = 1.680e-15 Identity = 42/93 (45.16%), Postives = 62/93 (66.67%), Query Frame = 3
Query: 183 SPSPQALIARVLEVLPLTDKDFVVDLGCGDGRWLVAAAQAAGCPCRGYDLNNALLSRARAAAQAAQLSALVSVEECDIFTASLSSATLVIVYL 461
+P+P+ ++ ++LE+ +T D V DLGCGDGR LVAAA GC GY+L+ + +ARAA +AA + LV V E D+ TA L+ T+V +Y+
Sbjct: 31 APTPRDVVTKMLELAAVTRDDVVADLGCGDGRILVAAANRYGCKAVGYELDPEYVKKARAAVEAAGVGKLVRVVEADLLTADLTGVTVVTLYV 123
BLAST of mRNA_S-ischiensis_contig1.1171.1 vs. uniprot
Match: A0A7S2W501_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W501_9STRA) HSP 1 Score: 80.1 bits (196), Expect = 1.930e-15 Identity = 65/161 (40.37%), Postives = 84/161 (52.17%), Query Frame = 3
Query: 54 GVAARPAATSGHMPPLRFKRALLQHARDTFARQ------------TTSTPIVAPISPSPQALIARVLEVLP-------LTDKDFVVDLGCGDGRWLVAAAQA-AGCPCRGYDLNNALLSRARAAAQAAQLSAL----VSVEECDIFTASLSSATLVIVYLF 464
G+AA AA LR ++ALL+ A F+ Q ++P++APISPSP+AL+ L + L VVDLGCGDGRWL A +A C GYDLN LL+RA QA + V + ++ TA LSSA+LVIVYLF
Sbjct: 2 GMAAATAAAGAK---LRLRKALLEEAARRFSEQQEESLRGGDGSGAEASPLLAPISPSPEALVDEALRRVAADPASALLGAGGTVVDLGCGDGRWLFACLEAFPEARCVGYDLNLELLARASQRKQALISGGMDPERVIFHQQNLLTADLSSASLVIVYLF 159
BLAST of mRNA_S-ischiensis_contig1.1171.1 vs. uniprot
Match: A0A6A3XID4_9STRA (Methyltransf_25 domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3XID4_9STRA) HSP 1 Score: 79.0 bits (193), Expect = 2.830e-15 Identity = 49/116 (42.24%), Postives = 65/116 (56.03%), Query Frame = 3
Query: 138 TFARQTTSTPIVAPISPSPQALIARV---LE--VLPLTDKDFVVDLGCGDGRWLVAAAQAAGCPCRGYDLNNALLSRARAAAQAAQLSALVSVEECDIFTASLSSATLVIVYLFRQ 470
T + + + AP SPSP A+I V LE L LT +D +VDLGCGDGRWLV+ + C G +L+ L+ RAR Q QL + V+ D+ A +S A LVIVY F +
Sbjct: 31 TLKSEDSEQELFAPFSPSPVAVIDAVWTKLEDAQLALTSEDLLVDLGCGDGRWLVSGVKRFDCKALGVELDETLVHRARTQVQEQQLQHKIQVQLGDVMLADISQAKLVIVYAFAE 146 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig1.1171.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig1.1171.1 >prot_S-ischiensis_contig1.1171.1 ID=prot_S-ischiensis_contig1.1171.1|Name=mRNA_S-ischiensis_contig1.1171.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=127bp MPPLRFKRALLQHARDTFARQTTSTPIVAPISPSPQALIARVLEVLPLTDback to top mRNA from alignment at S-ischiensis_contig1:7916999..7917958+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig1.1171.1 ID=mRNA_S-ischiensis_contig1.1171.1|Name=mRNA_S-ischiensis_contig1.1171.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=960bp|location=Sequence derived from alignment at S-ischiensis_contig1:7916999..7917958+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig1:7916999..7917958+ >mRNA_S-ischiensis_contig1.1171.1 ID=mRNA_S-ischiensis_contig1.1171.1|Name=mRNA_S-ischiensis_contig1.1171.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=762bp|location=Sequence derived from alignment at S-ischiensis_contig1:7916999..7917958+ (Schizocladia ischiensis KU_0333)back to top |