mRNA_S-ischiensis_contig1.1137.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig1.1137.1
Unique NamemRNA_S-ischiensis_contig1.1137.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
BLAST of mRNA_S-ischiensis_contig1.1137.1 vs. uniprot
Match: A0A835YW12_9STRA (Pyridoxal phosphate homeostasis protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW12_9STRA)

HSP 1 Score: 290 bits (741), Expect = 9.150e-92
Identity = 156/231 (67.53%), Postives = 183/231 (79.22%), Query Frame = 3
Query:  288 VPAALESVRRRVADAAVSSGRAHTPPRLVAVSKTKPLEALMAAYDAGQRVFGENYVQELLDKAPAMPEDVKWHFIGHIQSNKAKSLVMGVPNLSVVETVDSIKLAGKLDAACKAAERSDSLGVYLQVDTSGEDTKSGVAPKDCPSLARQVADSFSALRVSGLMTIGAPGDEGAFARLASCREEVAAALGVEASALDLSMGMSGDFEAAIAAGSTNVRVGSTIFGARHYPNR 980
            + AALESV++RVA A+   G AH   RLVAVSKTKP+  LMAAYDAGQR+FGENYVQEL+DKAP MPEDV+WHFIGH+QS KA  LV  VPNL  VETVD  K+A KL++AC AA R+  L VYLQVDTSGE+TKSGV P+  P+LA+ V +    L + GLMTIGAP D   F RLA+CR EVA ALGV+A++L+LSMGMSGDFE AIA GST+VRVGSTIFGAR+Y N+
Sbjct:   12 IKAALESVKQRVAAASAERGSAHAT-RLVAVSKTKPVSDLMAAYDAGQRIFGENYVQELIDKAPQMPEDVQWHFIGHLQSKKANGLVAKVPNLVAVETVDDDKIASKLNSACAAAGRASKLQVYLQVDTSGEETKSGVDPEGAPTLAKHVVEDCPNLELKGLMTIGAPDDFECFNRLAACRHEVAEALGVDAASLELSMGMSGDFEEAIARGSTSVRVGSTIFGARNYANK 241          
BLAST of mRNA_S-ischiensis_contig1.1137.1 vs. uniprot
Match: D8LNZ4_ECTSI (Pyridoxal phosphate homeostasis protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNZ4_ECTSI)

HSP 1 Score: 286 bits (732), Expect = 2.970e-90
Identity = 152/232 (65.52%), Postives = 183/232 (78.88%), Query Frame = 3
Query:  300 LESVRRRVADAAVSSGRAHTP-PRLVAVSKTKPLEALMAAYDAGQRVFGENYVQELLDKAPAMPEDVKWHFIGHIQSNKAKSLVMGVPNLSVVETVDSIKLAGKLDAACKAAERSDSLGVYLQVDTSGEDTKSGVAPKD---CPSLARQVADSFSALRVSGLMTIGAPGDEGAFARLASCREEVAAALGVEASALDLSMGMSGDFEAAIAAGSTNVRVGSTIFGARHYPNRS 983
            LE+VR+RV +     G A  P PRLVAVSKTKPLE L  AYDAGQR+FGENY QEL+DK+P MP+DV WHFIGH+QSNKAK+LV GVPNL+V+ET+D++KLA KL +AC ++ER   LGVYLQ+DTSGED+K+G+   D   C SLAR + D+  AL + GLMTIGAPGD   F RL +CR+ VA  LG+EA AL+LSMGMSGD+E AI  GSTNVRVGSTIFGAR YPN++
Sbjct:   22 LEAVRKRVEEV-TGEGEAGKPVPRLVAVSKTKPLENLQDAYDAGQRIFGENYAQELIDKSPQMPDDVVWHFIGHLQSNKAKALVAGVPNLAVLETLDTVKLANKLQSACVSSERKRPLGVYLQIDTSGEDSKAGIYHSDLDACLSLARHLKDNCPALELKGLMTIGAPGDMECFDRLNACRDAVAGGLGMEAQALELSMGMSGDYEEAIRRGSTNVRVGSTIFGARFYPNKT 252          
BLAST of mRNA_S-ischiensis_contig1.1137.1 vs. uniprot
Match: A0A0D2JXI3_9CHLO (Pyridoxal phosphate homeostasis protein n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2JXI3_9CHLO)

HSP 1 Score: 258 bits (659), Expect = 1.950e-79
Identity = 144/228 (63.16%), Postives = 169/228 (74.12%), Query Frame = 3
Query:  297 ALESVRRRVADAAVSSGRAHTPPRLVAVSKTKPLEALMAAYDAGQRVFGENYVQELLDKAPAMPEDVKWHFIGHIQSNKAKSLVMGVPNLSVVETVDSIKLAGKLDAACKAAERSDSLGVYLQVDTSGEDTKSGVAPKDCPSLARQVADSFSALRVSGLMTIGAPGDEGA---FARLASCREEVAAALGVEASALDLSMGMSGDFEAAIAAGSTNVRVGSTIFGARHY 971
            AL+ V +RV  A   +GRA  PPRLVAVSKTKP EA+  AYDAG R FGENYVQELLDKAP +P D++WHFIGH+QSNK K+LV GVPNLS++ETVDS KLA ++D     A R + L V +QV+TSGE++K GV P D  +LA  VA +   LR++GLMTIG P        F  LA CR+EVAAALG+    L+LSMGMSGDFEAAIA GSTNVRVGSTIFGAR Y
Sbjct:   15 ALQDVAQRVEAAGSKAGRAK-PPRLVAVSKTKPAEAVREAYDAGHRTFGENYVQELLDKAPLLPSDIQWHFIGHLQSNKVKALVEGVPNLSMIETVDSAKLADRIDRCVAGAGRKEPLAVAVQVNTSGEESKYGVEPADVVALATHVAKACPHLRLAGLMTIGMPDYSSRPENFECLAKCRDEVAAALGMSPDDLELSMGMSGDFEAAIAMGSTNVRVGSTIFGARDY 241          
BLAST of mRNA_S-ischiensis_contig1.1137.1 vs. uniprot
Match: A0A150G956_GONPE (Pyridoxal phosphate homeostasis protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150G956_GONPE)

HSP 1 Score: 254 bits (650), Expect = 4.600e-78
Identity = 141/237 (59.49%), Postives = 174/237 (73.42%), Query Frame = 3
Query:  273 LAVEGVPAALESVRRRVADAAVSSGRAHTPPRLVAVSKTKPLEALMAAYDAGQRVFGENYVQELLDKAPAMPEDVKWHFIGHIQSNKAKSLVMGVPNLSVVETVDSIKLAGKLDAACKAAERSDSLGVYLQVDTSGEDTKSGVAPKDCPSLARQVADSFSALRVSGLMTIGAPGDEGA---FARLASCREEVAAALGVEASALDLSMGMSGDFEAAIAAGSTNVRVGSTIFGARHYP 974
            +A + V  AL+ V  R+  A+  +GR   P RLVAVSKTKP+EAL  AYDAGQRVFGENYVQE+LDK PA+P D++WHFIGH+QSNK K++V GVPNLS+VETVDS KLA +L+ A + A R + L V +QV+TSGE++K GV P  C  +AR +A +   LR++GLMTIG P        F+ LA CR  VAA LG+   +L+LSMGMSGDFE AI  GSTN+RVGSTIFGAR YP
Sbjct:    1 MADKQVETALKDVMSRMKQASERAGRTQ-PIRLVAVSKTKPVEALQEAYDAGQRVFGENYVQEMLDKVPALPADIQWHFIGHLQSNKVKAVVEGVPNLSMVETVDSTKLADRLNRAVEQAGRPEPLAVMVQVNTSGEESKYGVEPDGCVDVARHIAKNCPRLRLAGLMTIGQPDYSSRPENFSCLADCRRRVAAELGLPDESLELSMGMSGDFEQAIEMGSTNIRVGSTIFGAREYP 236          
BLAST of mRNA_S-ischiensis_contig1.1137.1 vs. uniprot
Match: A0A8J4H0A5_9CHLO (Pyridoxal phosphate homeostasis protein n=3 Tax=Volvox TaxID=3066 RepID=A0A8J4H0A5_9CHLO)

HSP 1 Score: 254 bits (649), Expect = 1.460e-77
Identity = 141/239 (59.00%), Postives = 175/239 (73.22%), Query Frame = 3
Query:  273 LAVEGVPAALESVRRRVADAAVSSGRAHTPPRLVAVSKTKPLEALMAAYDAGQRVFGENYVQELLDKAPAMPEDVKWHFIGHIQSNKAKSLVMGVPNLSVVETVDSIKLAGKLDAACKAAERSDSLGVYLQVDTSGEDTKSGVAPKDCPSLARQVADSFSALRVSGLMTIGAPGDEGA---FARLASCREEVAAALGVEASALDLSMGMSGDFEAAIAAGSTNVRVGSTIFGARHYPNR 980
            +A + V  AL+ V  R+  A+  +GR   P RLVAVSKTKP+EAL  AYDAGQRVFGENYVQE+LDKAPA+P D++WHFIGH+QSNK K++V  VPNL++VETVDS KLA KL+ A   A R++ L V +QV+TSGE++K G+ P +C +LA+ +  S   LR++GLMTIG P        F  LA CR +VAA LG+    L+LSMGMSGDFE AI  GSTN+RVGSTIFGAR YP R
Sbjct:   25 MAEKSVAIALQDVISRMKRASEGAGRTQ-PVRLVAVSKTKPVEALQEAYDAGQRVFGENYVQEMLDKAPALPSDIQWHFIGHLQSNKVKAIVENVPNLAMVETVDSTKLADKLNRAVDLAGRTEPLAVMVQVNTSGEESKFGLEPGECVALAKHIVQSCPKLRLAGLMTIGMPDYSSRPENFQCLADCRAKVAAELGLVPEHLELSMGMSGDFEQAIEMGSTNIRVGSTIFGAREYPAR 262          
BLAST of mRNA_S-ischiensis_contig1.1137.1 vs. uniprot
Match: D8U9J9_VOLCA (Pyridoxal phosphate homeostasis protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8U9J9_VOLCA)

HSP 1 Score: 250 bits (639), Expect = 2.210e-76
Identity = 142/244 (58.20%), Postives = 174/244 (71.31%), Query Frame = 3
Query:  273 LAVEGVPAALESVRRRVADAAVSSGRAHTPPRLVAVSKTKPLEALMAAYDAGQRVFGENYVQELLDKAPAMPEDVKWHFIGHIQSNKAKSLVMGVPNLSVVETVDSIKLAGKLDAACKAAERSDSLGVYLQVDTSGEDTKSGVAPKDCPSLARQVADSFSALRVSGLMTIGAPGDEGA---FARLASCREEVAAALGVEASALDLSMGMSGDFEAAIAAGSTNVRVGSTIFGARHYPNRSA*DP 995
            +A   V  AL+ V  R+  A+  +GR  +  RLVAVSKTKP+EAL  AYDAGQRVFGENYVQE+LDKAPA+P DV+WHFIGH+QSNK K++V  VPNL++VETVDS KLA KL+ A + A R+  L V +QV+TSGE++K GV P +C +LA+ +  S   LR++GLMTIG P        F  LA CR +VAA LG+    L+LSMGMSGDFE AI  GSTN+RVGSTIFGAR Y    A  P
Sbjct:    1 MAERPVSTALQDVLTRMKQASERAGRTQSV-RLVAVSKTKPVEALQEAYDAGQRVFGENYVQEMLDKAPALPSDVQWHFIGHLQSNKVKAVVENVPNLAMVETVDSTKLADKLNRAVEVAGRTQPLAVMVQVNTSGEESKFGVEPGECVALAKHIVQSCPKLRLAGLMTIGMPDYSSRPENFECLADCRMKVAAELGMVPEHLELSMGMSGDFEQAIEMGSTNIRVGSTIFGARDYSKTRAKSP 243          
BLAST of mRNA_S-ischiensis_contig1.1137.1 vs. uniprot
Match: E1Z6H7_CHLVA (Pyridoxal phosphate homeostasis protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1Z6H7_CHLVA)

HSP 1 Score: 248 bits (634), Expect = 5.060e-76
Identity = 136/224 (60.71%), Postives = 166/224 (74.11%), Query Frame = 3
Query:  321 VADAAVSSGRAHTPPRLVAVSKTKPLEALMAAYDAGQRVFGENYVQELLDKAPAMPEDVKWHFIGHIQSNKAKSLVMGVPNLSVVETVDSIKLAGKLDAACKAAERSDSLGVYLQVDTSGEDTKSGVAPKDCPSLARQVADSFSALRVSGLMTIGAPGDEGA---FARLASCREEVAAALGVEASALDLSMGMSGDFEAAIAAGSTNVRVGSTIFGARHYPNRS 983
            +A AA  +GRA  PPRLVAVSKTKP EA+  AY+AG RVFGENYVQEL DKAP +P+D  WHFIGH+QSNK K+L+  VPNL+++ETVDS KLA KLD+   +  R   L V++QV+TSGE++K GV P+DC +LAR + +    LR++GLMTIG P        F  LA CR  V AALG++   L+LSMGMSGDFEAAI  GSTNVRVGSTIFGAR YP ++
Sbjct:    1 MAAAAARAGRAGRPPRLVAVSKTKPAEAVREAYEAGHRVFGENYVQELADKAPLLPQDCAWHFIGHLQSNKVKALLEAVPNLALLETVDSAKLASKLDSTVASLGRPP-LAVFVQVNTSGEESKYGVEPQDCLALARHIHEQCPHLRLAGLMTIGMPDYTSRPENFRCLADCRRAVCAALGLQEGDLELSMGMSGDFEAAIEMGSTNVRVGSTIFGARQYPAKA 223          
BLAST of mRNA_S-ischiensis_contig1.1137.1 vs. uniprot
Match: A0A7S0S0D0_9CHLO (Pyridoxal phosphate homeostasis protein n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0S0D0_9CHLO)

HSP 1 Score: 249 bits (635), Expect = 8.450e-76
Identity = 138/229 (60.26%), Postives = 166/229 (72.49%), Query Frame = 3
Query:  297 ALESVRRRVADAAVSSGRAHTPPRLVAVSKTKPLEALMAAYDAGQRVFGENYVQELLDKAPAMPEDVKWHFIGHIQSNKAKSLVMGVPNLSVVETVDSIKLAGKLDAACKAAERSDSLGVYLQVDTSGEDTKSGVAPKDCPSLARQVADSFSALRVSGLMTIGAPGDEGA---FARLASCREEVAAALGVEASALDLSMGMSGDFEAAIAAGSTNVRVGSTIFGARHYP 974
            AL  V  RV D           PRLVAVSKTKP EA+  AY+AGQRVFGENYVQE+LDKAP +P+D++WHFIGH+QSNK K+++ GVPNL+++ETVDS KLA KL+ A +AA+R D L V +QV+TSGE++K GV P DC  LA  +    S LR++GLMTIG P        F  LA CRE VA  LG++  +L+LSMGMSGDFE AI  GSTNVRVGSTIFGAR YP
Sbjct:   20 ALTDVLSRV-DTVAKKAAMPVMPRLVAVSKTKPAEAVQEAYEAGQRVFGENYVQEMLDKAPLLPKDIQWHFIGHLQSNKVKAIIEGVPNLTMIETVDSTKLADKLNKAVEAAKR-DPLPVMVQVNTSGEESKYGVQPADCVPLAAHIVRKCSGLRLAGLMTIGQPDYSSRPENFTCLAQCREAVAKELGLDPGSLELSMGMSGDFEQAIEMGSTNVRVGSTIFGAREYP 246          
BLAST of mRNA_S-ischiensis_contig1.1137.1 vs. uniprot
Match: A0A7S0KJV8_9CHLO (Pyridoxal phosphate homeostasis protein n=1 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7S0KJV8_9CHLO)

HSP 1 Score: 247 bits (630), Expect = 2.970e-75
Identity = 133/228 (58.33%), Postives = 164/228 (71.93%), Query Frame = 3
Query:  297 ALESVRRRVADAAVSSGRAHTPPRLVAVSKTKPLEALMAAYDAGQRVFGENYVQELLDKAPAMPEDVKWHFIGHIQSNKAKSLVMGVPNLSVVETVDSIKLAGKLDAACKAAERSDSLGVYLQVDTSGEDTKSGVAPKDCPSLARQVADSFSALRVSGLMTIGAPGDEGA---FARLASCREEVAAALGVEASALDLSMGMSGDFEAAIAAGSTNVRVGSTIFGARHY 971
            AL  V  RVA AA  +GR  +  RLVAVSKTKP+E L   YDAG R FGENYVQE++DKAP+MP D +WHFIGH+QSNKAK+L+  VPNL+++ET+DS KLA KL++  +A E  ++L V +QV+TSGE++K GV P +C  LA+ + D    L   GLMTIG P        F  L  CR++V AALG++  A +LSMGMSGDFEAAI  GSTNVRVGSTIFGAR Y
Sbjct:    4 ALSDVAARVAAAAQRAGRTPSTVRLVAVSKTKPVELLRECYDAGHRTFGENYVQEIVDKAPSMPADTQWHFIGHLQSNKAKTLLEAVPNLAMIETIDSKKLASKLNSVLEAREAREALRVLVQVNTSGEESKHGVEPSECVELAKHIKDECPRLMFRGLMTIGMPDYTSKPENFITLKKCRDDVCAALGIDLDACELSMGMSGDFEAAIEMGSTNVRVGSTIFGARDY 231          
BLAST of mRNA_S-ischiensis_contig1.1137.1 vs. uniprot
Match: I0YN75_COCSC (Pyridoxal phosphate homeostasis protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YN75_COCSC)

HSP 1 Score: 247 bits (630), Expect = 3.610e-75
Identity = 134/234 (57.26%), Postives = 175/234 (74.79%), Query Frame = 3
Query:  288 VPAALESVRRRVADAAVSSGRAHTPPRLVAVSKTKPLEALMAAYDAGQRVFGENYVQELLDKAPAMPEDVKWHFIGHIQSNKAKSLVMGVPNLSVVETVDSIKLAGKLDAACKAAERSDSLGVYLQVDTSGEDTKSGVAPKDCPSLARQVADSFSALRVSGLMTIGAPGDEGA---FARLASCREEVAAALGVEASALDLSMGMSGDFEAAIAAGSTNVRVGSTIFGARHYPNR 980
            V  AL+SV  RV  AA  SGR ++ PRLVA+SKTKP+EA+  AYD+G R+FGENYVQE++DKAP +P+D++WHF+GH+QSNKAK+L+ GVPNL+++ETVD+ KLA KLD+  +   R+  L V +QV+TSGE++K GV P +C +LAR ++D  S LR +GLMTIG P        F  L +CR+EV   LG+  + ++LSMGMSGDFE AI  GSTNVRVGSTIFGAR Y  +
Sbjct:    9 VATALKSVLERVDSAAQRSGR-NSQPRLVAISKTKPVEAIQEAYDSGHRIFGENYVQEIVDKAPKLPDDIRWHFVGHLQSNKAKTLLDGVPNLALLETVDTEKLANKLDSTLQQLGRAP-LPVLVQVNTSGEESKYGVEPSECTALARHISDRCSHLRFAGLMTIGQPDYSSRPENFQCLEACRDEVCKELGLSPADVELSMGMSGDFEQAIEMGSTNVRVGSTIFGARDYSKK 240          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig1.1137.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YW12_9STRA9.150e-9267.53Pyridoxal phosphate homeostasis protein n=1 Tax=Tr... [more]
D8LNZ4_ECTSI2.970e-9065.52Pyridoxal phosphate homeostasis protein n=1 Tax=Ec... [more]
A0A0D2JXI3_9CHLO1.950e-7963.16Pyridoxal phosphate homeostasis protein n=1 Tax=Mo... [more]
A0A150G956_GONPE4.600e-7859.49Pyridoxal phosphate homeostasis protein n=1 Tax=Go... [more]
A0A8J4H0A5_9CHLO1.460e-7759.00Pyridoxal phosphate homeostasis protein n=3 Tax=Vo... [more]
D8U9J9_VOLCA2.210e-7658.20Pyridoxal phosphate homeostasis protein n=1 Tax=Vo... [more]
E1Z6H7_CHLVA5.060e-7660.71Pyridoxal phosphate homeostasis protein n=1 Tax=Ch... [more]
A0A7S0S0D0_9CHLO8.450e-7660.26Pyridoxal phosphate homeostasis protein n=1 Tax=Ch... [more]
A0A7S0KJV8_9CHLO2.970e-7558.33Pyridoxal phosphate homeostasis protein n=1 Tax=Os... [more]
I0YN75_COCSC3.610e-7557.26Pyridoxal phosphate homeostasis protein n=1 Tax=Co... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig1contigS-ischiensis_contig1:7755937..7758430 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score289.3
Seed ortholog evalue2.2e-75
Seed eggNOG ortholog2880.D8LNZ4
Preferred namePROSC
KEGG rclassRC00553
KEGG koko:K01469,ko:K06997
KEGG ReactionR00251
KEGG Pathwayko00480,map00480
GOsGO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006522,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009078,GO:0009987,GO:0010467,GO:0019538,GO:0019752,GO:0019842,GO:0030170,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044464,GO:0048037,GO:0050662,GO:0051604,GO:0070279,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901605
EggNOG free text desc.pyridoxal phosphate binding
EggNOG OGsCOG0325@1,KOG3157@2759
EC3.5.2.9
COG Functional cat.F
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionUncharacterised protein family UPF0001
Ec32 orthologEc-01_000520.1
Exons3
Model size1617
Cds size948
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig1.1137.1prot_S-ischiensis_contig1.1137.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig1 7755978..7757802 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815485.5772028-UTR-S-ischiensis_contig1:7755936..77559771622815485.5772028-UTR-S-ischiensis_contig1:7755936..7755977Schizocladia ischiensis KU_0333UTRS-ischiensis_contig1 7755937..7755977 +
1695739728.7925286-UTR-S-ischiensis_contig1:7755936..77559771695739728.7925286-UTR-S-ischiensis_contig1:7755936..7755977Schizocladia ischiensis KU_0333UTRS-ischiensis_contig1 7755937..7755977 +
1622815485.6297228-UTR-S-ischiensis_contig1:7757802..77584301622815485.6297228-UTR-S-ischiensis_contig1:7757802..7758430Schizocladia ischiensis KU_0333UTRS-ischiensis_contig1 7757803..7758430 +
1695739728.8422542-UTR-S-ischiensis_contig1:7757802..77584301695739728.8422542-UTR-S-ischiensis_contig1:7757802..7758430Schizocladia ischiensis KU_0333UTRS-ischiensis_contig1 7757803..7758430 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815485.588085-CDS-S-ischiensis_contig1:7755977..77563881622815485.588085-CDS-S-ischiensis_contig1:7755977..7756388Schizocladia ischiensis KU_0333CDSS-ischiensis_contig1 7755978..7756388 +
1695739728.809362-CDS-S-ischiensis_contig1:7755977..77563881695739728.809362-CDS-S-ischiensis_contig1:7755977..7756388Schizocladia ischiensis KU_0333CDSS-ischiensis_contig1 7755978..7756388 +
1622815485.6003714-CDS-S-ischiensis_contig1:7756847..77570601622815485.6003714-CDS-S-ischiensis_contig1:7756847..7757060Schizocladia ischiensis KU_0333CDSS-ischiensis_contig1 7756848..7757060 +
1695739728.8178666-CDS-S-ischiensis_contig1:7756847..77570601695739728.8178666-CDS-S-ischiensis_contig1:7756847..7757060Schizocladia ischiensis KU_0333CDSS-ischiensis_contig1 7756848..7757060 +
1622815485.6175172-CDS-S-ischiensis_contig1:7757478..77578021622815485.6175172-CDS-S-ischiensis_contig1:7757478..7757802Schizocladia ischiensis KU_0333CDSS-ischiensis_contig1 7757479..7757802 +
1695739728.826725-CDS-S-ischiensis_contig1:7757478..77578021695739728.826725-CDS-S-ischiensis_contig1:7757478..7757802Schizocladia ischiensis KU_0333CDSS-ischiensis_contig1 7757479..7757802 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig1.1137.1

>prot_S-ischiensis_contig1.1137.1 ID=prot_S-ischiensis_contig1.1137.1|Name=mRNA_S-ischiensis_contig1.1137.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=316bp
MSPAPRCLSSLIAASSPSAAFLGGQSFAGRWLPGSTAKIRARPPASVYAV
NLANARHLRFSTMSAAQEATPPTPSAELAVEGVPAALESVRRRVADAAVS
SGRAHTPPRLVAVSKTKPLEALMAAYDAGQRVFGENYVQELLDKAPAMPE
DVKWHFIGHIQSNKAKSLVMGVPNLSVVETVDSIKLAGKLDAACKAAERS
DSLGVYLQVDTSGEDTKSGVAPKDCPSLARQVADSFSALRVSGLMTIGAP
GDEGAFARLASCREEVAAALGVEASALDLSMGMSGDFEAAIAAGSTNVRV
GSTIFGARHYPNRSA*
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mRNA from alignment at S-ischiensis_contig1:7755937..7758430+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig1.1137.1 ID=mRNA_S-ischiensis_contig1.1137.1|Name=mRNA_S-ischiensis_contig1.1137.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=2494bp|location=Sequence derived from alignment at S-ischiensis_contig1:7755937..7758430+ (Schizocladia ischiensis KU_0333)
CTTGTCGAACGGGGCGTTCACTTCCCGCTCTCTCTTTGGTGATGTCCCCG GCGCCGCGGTGCTTGTCTTCATTGATTGCTGCGTCCTCCCCTTCTGCCGC ATTCTTGGGGGGTCAATCCTTTGCTGGACGGTGGCTTCCTGGTAGTACCG CCAAAATCCGAGCTCGACCCCCGGCCTCGGTGTACGCGGTCAATTTGGCA AACGCGAGGCACTTACGGTTTAGTACAATGTCTGCGGCGCAAGAGGCAAC GCCTCCAACGCCATCTGCGGAACTGGCGGTGGAGGGCGTCCCGGCGGCCC TCGAGTCGGTGCGGAGGCGCGTCGCTGACGCAGCCGTGTCGAGTGGCAGG GCCCACACACCGCCACGGCTTGTGGCGGTGAGCAAGACCAAGCCGCTGGA GGCTCTGATGGCGGCCTACGATGCTGGCCAGAGGGTCTTTGGGGAAAACT ATGTGAGTGTTTCGGAGGAACGGCCGACACGTGGGAGTGCACAGGACCAG GAGGCCGAGGCTGGTGGTGTGCTGAATGGGTTGCTTGCCACAGCCGTGTA TGAACACTGCCCTTACGAGGGGAGTCCAGTATTCCTGGGTTTGTCGGCGC CCTGGAAGACATTTGCTGCCACCAGCCTCTGAGTCCCTTCTTCAACTCAC TATCTCGTCATACGCCTGGTCAGCCAGGGGGGTGGGGTGGGTGAGTTGGT CTCTCCCACTGCCCCGTATGTCCCTGAGAACATATCCTGCCTGCAGTGGG CAAGTTCGGTTCTGCCCACCTTCCACCGTCTCCATTTCCTGCTCACCCAC ACCTCCGGCTTGCATCGCTTGACCAGTCCAGCCGTTCACTGCTACATACG TACTCGAGTAGCTTTATACTTCATAGCACCCACCCTCCCTTTCTCGCCCC TCTGCGGGCAGGTACAAGAGCTTTTGGACAAGGCACCAGCCATGCCAGAA GATGTGAAGTGGCACTTCATCGGCCACATTCAGTCCAACAAGGCCAAGAG TCTGGTCATGGGGGTGCCCAACCTCAGCGTGGTCGAGACTGTGGACAGCA TTAAGTTGGCGGGCAAACTCGATGCCGCCTGCAAGGCGGCTGAGCGGTCG GACTCTCTGGGCGTGTACCTACAGGTGATGGCATCCCTGGGGTGGGGTGC ACGTGTGTGCATGCGTCTGCGCGTGCTTGGCACGCGCTTGTGTGTGTGTA TGCCTTTGTCCACGCTCCCGCACAATAGACATGGGCTGCCGCGGAGGTAC ACGCGCGTTGTGCAGGAGCTCAGCAGTCAACTCATAAGTAATTCGTACGC GACCTACAGTAGAGCTCTACTCTATGCAAAGCAGGTACAGTTTTACACCC CCCACGCAATGCGTTTTCGCCAGCGCTGGGAAGCCCCGTGCCGGCGAGCT GTGTCGCCCTCCGCAAGAGCCCCGAGACATGGGCCTCACCGAAACTGCCG CGCCGCATCCCAACGACAACTACCGTACCCACGTCCCTCTCTGCGCTTCT CGTGACGAACGAAACGGCGCCAACCGCGAATCAACACAACAGGTGGACAC CAGTGGCGAGGACACCAAGTCGGGCGTCGCGCCCAAGGACTGCCCGTCCC TGGCCCGCCAGGTGGCTGACAGTTTCAGCGCGCTGCGGGTGAGCGGCCTC ATGACCATCGGAGCGCCGGGCGATGAGGGGGCCTTCGCCCGCCTGGCGTC GTGCCGGGAGGAGGTGGCCGCGGCACTGGGCGTGGAGGCATCCGCGCTGG ATCTGAGCATGGGCATGTCGGGTGACTTTGAGGCGGCCATTGCCGCCGGG AGCACCAATGTGCGTGTGGGGTCCACCATATTCGGGGCCCGGCACTACCC CAACCGGAGCGCCTGAGACCCCTGTCTGACACGGCATGGCCTGGCCTGGC GCGACTATCAATGAATGGAGTGACTTGGTTTGACTTGGGGTCCACGATAT TCCTTCTCCTGGTGTGCGGCACTGCAGAAGGACTTTGTACTCGAGTTCGT GCTGCGCATACCCCTGAGCTTGGGCTCAGCTTGACCGTTCACTATGGCTT GCTTGCCAGGCGTTTCTGATGCCGTTGCTTGGCTGGATTTCGCGTGACAC GGATGTGGCGGCATGTTTTAGGGCTGCGCTTGTTTGAGTGTTGGATGTAG AACCCCTTCTTGCTCCTGAAGGTGTCCTACGTGATTCCACCTAGGGTCGG TGCCTCACGGAGCACGAGGACTGAACATGCCAAAGCCCGATAAGCAGATG TCCTGTGCCTCACCAGTCAAGTACGTACTCGTATTAAATACCCAAGGCAA GGGTGCCCTTTAATGATCTACACGTATTAACCTAAGTTTTGACTTAGGGC TGTCGGCAATGCAAGCAAGGTGATGTCGCAAGACAAGCCACTGAGTTCAT ACTATGTATATACTTCGAAGTATTGAAAGAACTCGGGGAGAGGTGCAGGC CACTCACTGAAGGCGGTGACCCTTCCTTAGGTGGCCAGGGGAGG
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Coding sequence (CDS) from alignment at S-ischiensis_contig1:7755937..7758430+

>mRNA_S-ischiensis_contig1.1137.1 ID=mRNA_S-ischiensis_contig1.1137.1|Name=mRNA_S-ischiensis_contig1.1137.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1896bp|location=Sequence derived from alignment at S-ischiensis_contig1:7755937..7758430+ (Schizocladia ischiensis KU_0333)
ATGTCCCCGGCGCCGCGGTGCTTGTCTTCATTGATTGCTGCGTCCTCCCC
TTCTGCCGCATTCTTGGGGGGTCAATCCTTTGCTGGACGGTGGCTTCCTG
GTAGTACCGCCAAAATCCGAGCTCGACCCCCGGCCTCGGTGTACGCGGTC
AATTTGGCAAACGCGAGGCACTTACGGTTTAGTACAATGTCTGCGGCGCA
AGAGGCAACGCCTCCAACGCCATCTGCGGAACTGGCGGTGGAGGGCGTCC
CGGCGGCCCTCGAGTCGGTGCGGAGGCGCGTCGCTGACGCAGCCGTGTCG
AGTGGCAGGGCCCACACACCGCCACGGCTTGTGGCGGTGAGCAAGACCAA
GCCGCTGGAGGCTCTGATGGCGGCCTACGATGCTGGCCAGAGGGTCTTTG
GGGAAAACTATATGTCCCCGGCGCCGCGGTGCTTGTCTTCATTGATTGCT
GCGTCCTCCCCTTCTGCCGCATTCTTGGGGGGTCAATCCTTTGCTGGACG
GTGGCTTCCTGGTAGTACCGCCAAAATCCGAGCTCGACCCCCGGCCTCGG
TGTACGCGGTCAATTTGGCAAACGCGAGGCACTTACGGTTTAGTACAATG
TCTGCGGCGCAAGAGGCAACGCCTCCAACGCCATCTGCGGAACTGGCGGT
GGAGGGCGTCCCGGCGGCCCTCGAGTCGGTGCGGAGGCGCGTCGCTGACG
CAGCCGTGTCGAGTGGCAGGGCCCACACACCGCCACGGCTTGTGGCGGTG
AGCAAGACCAAGCCGCTGGAGGCTCTGATGGCGGCCTACGATGCTGGCCA
GAGGGTCTTTGGGGAAAACTATGTACAAGAGCTTTTGGACAAGGCACCAG
CCATGCCAGAAGATGTGAAGTGGCACTTCATCGGCCACATTCAGTCCAAC
AAGGCCAAGAGTCTGGTCATGGGGGTGCCCAACCTCAGCGTGGTCGAGAC
TGTGGACAGCATTAAGTTGGCGGGCAAACTCGATGCCGCCTGCAAGGCGG
CTGAGCGGTCGGACTCTCTGGGCGTGTACCTACAGGTACAAGAGCTTTTG
GACAAGGCACCAGCCATGCCAGAAGATGTGAAGTGGCACTTCATCGGCCA
CATTCAGTCCAACAAGGCCAAGAGTCTGGTCATGGGGGTGCCCAACCTCA
GCGTGGTCGAGACTGTGGACAGCATTAAGTTGGCGGGCAAACTCGATGCC
GCCTGCAAGGCGGCTGAGCGGTCGGACTCTCTGGGCGTGTACCTACAGGT
GGACACCAGTGGCGAGGACACCAAGTCGGGCGTCGCGCCCAAGGACTGCC
CGTCCCTGGCCCGCCAGGTGGCTGACAGTTTCAGCGCGCTGCGGGTGAGC
GGCCTCATGACCATCGGAGCGCCGGGCGATGAGGGGGCCTTCGCCCGCCT
GGCGTCGTGCCGGGAGGAGGTGGCCGCGGCACTGGGCGTGGAGGCATCCG
CGCTGGATCTGAGCATGGGCATGTCGGGTGACTTTGAGGCGGCCATTGCC
GCCGGGAGCACCAATGTGCGTGTGGGGTCCACCATATTCGGGGCCCGGCA
CTACCCCAACCGGAGCGCCTGAGTGGACACCAGTGGCGAGGACACCAAGT
CGGGCGTCGCGCCCAAGGACTGCCCGTCCCTGGCCCGCCAGGTGGCTGAC
AGTTTCAGCGCGCTGCGGGTGAGCGGCCTCATGACCATCGGAGCGCCGGG
CGATGAGGGGGCCTTCGCCCGCCTGGCGTCGTGCCGGGAGGAGGTGGCCG
CGGCACTGGGCGTGGAGGCATCCGCGCTGGATCTGAGCATGGGCATGTCG
GGTGACTTTGAGGCGGCCATTGCCGCCGGGAGCACCAATGTGCGTGTGGG
GTCCACCATATTCGGGGCCCGGCACTACCCCAACCGGAGCGCCTGA
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