mRNA_S-ischiensis_contig1.1083.1 (mRNA) Schizocladia ischiensis KU_0333
|
Overview
Homology
BLAST of mRNA_S-ischiensis_contig1.1083.1 vs. uniprot
Match: A0A6H5J9R9_9PHAE (Pribosyltran_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9R9_9PHAE) HSP 1 Score: 416 bits (1068), Expect = 5.870e-136 Identity = 213/325 (65.54%), Postives = 262/325 (80.62%), Query Frame = 3
Query: 195 DAYFEPDYDFIKVFGGSSNKPLTEEISARLGVEPGRVTLGKYADGEVMLRLDEQVRGRDIYIVQSGQKPVNDHLMELLLMVSTCQRASAKRVTAVLPYYPYKWHRRGVPVNQDLNSRFLWSA--AADFGRMLEVMGVDRVIAVDLERPGQGHESSFFGPAVPVETLLTTHLFAKHMAKNVLGPD--HSGGVTVVSPSSALMKKAVQFKRTLEAAGLRDVRVSTFLHDRSTAGPVDVRANELVGDMRTAVEGRTVIVVDELIDTGKTLRVLPGKLLQAGAKVIYMCSSHGLFTENAMEALDASPVEKVFVTNSVPLPSGKATPKIE 1157
D +F+PDY+++ V GGSSNK L EI+ +G++ G VTLG+YADGEVM++LDE VRG+D+YIVQSGQKPVND+L+ELLLMVST QRASAKRVTAV+PY+PYK HRR VPV+ DL+SRFLWSA +AD GR+LEVMGVDRVIAVDLERPG G +F GP +PVETLLTT++FA+H+A+ +LG D H GVTV+SPSS L+KKA+QFKR L + DVRV TFLH R +GPVDV +NEL+G++ V+GR V++VDELIDTG TL LP +L +AGA IY+CSSHGLF NA+ L+ SPV+ VFVTNSVPLP G + KIE
Sbjct: 134 DKFFDPDYEYLMVVGGSSNKQLANEIAEEMGLKCGAVTLGRYADGEVMVQLDEHVRGKDVYIVQSGQKPVNDNLIELLLMVSTMQRASAKRVTAVIPYFPYKHHRRSVPVSADLHSRFLWSAGESADVGRLLEVMGVDRVIAVDLERPGTGSGGAFLGPGIPVETLLTTNIFAEHIAERILGKDKSHQRGVTVISPSSGLVKKAIQFKRKLREY-VDDVRVQTFLHARPNSGPVDVSSNELMGNIGE-VKGRDVVIVDELIDTGGTLAALPRRLKKAGAMNIYVCSSHGLFNANAVAILEESPVDTVFVTNSVPLPEGCKSKKIE 456
BLAST of mRNA_S-ischiensis_contig1.1083.1 vs. uniprot
Match: A0A835Z4X7_9STRA (N-terminal domain of ribose phosphate pyrophosphokinase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4X7_9STRA) HSP 1 Score: 373 bits (957), Expect = 1.350e-120 Identity = 190/312 (60.90%), Postives = 237/312 (75.96%), Query Frame = 3
Query: 195 DAYFEPDYDFIKVFGGSSNKPLTEEISARLGVEPGRVTLGKYADGEVMLRLDEQVRGRDIYIVQSGQKPVNDHLMELLLMVSTCQRASAKRVTAVLPYYPYKWHRRGVPVNQDLNSRFLWSAAADFGRMLEVMGVDRVIAVDLERPGQGHESSFFGPAVPVETLLTTHLFAKHMAKNVLGPDHSGGVTVVSPSSALMKKAVQFKRTL-EAAGLRDVRVSTFLHDRSTAGPVDVRANELV--GDMRTAVEGRTVIVVDELIDTGKTLRVLPGKLLQAGAKVIYMCSSHGLFTENAMEALDASPVEKVFVTNSV 1121
D YF DYD++KV GSSN+ L +EI+ LGV G LG+YADGE+ + L EQVRG+D+Y++QSGQ+PVNDHLMELLL+VST QRASAKRVTAV+PY+PYK HRRGVP++ LNSRFL SAAADFG LEVMGVDR+IAVDLERPG +ES+FF P VPVETLLTT+LFA H+A+ P H G + VVSPSSALMKK+V F L A DVRV+TF+H + AGPVD+ NEL+ GD+R GR V++VDELIDTG TL L KL + GA+ IY+ SSH LF + +E L+ +P+ +V+V+N++
Sbjct: 45 DTYFSSDYDYLKVISGSSNRKLAKEIADLLGVGLGDCELGRYADGEISINLGEQVRGKDVYVMQSGQRPVNDHLMELLLLVSTVQRASAKRVTAVIPYFPYKHHRRGVPISTGLNSRFLLSAAADFGHCLEVMGVDRIIAVDLERPGSSNESNFFSPGVPVETLLTTNLFAHHIARAAFPPAHGGDILVVSPSSALMKKSVGFATVLARALPNADVRVTTFVHSTARAGPVDISTNELIASGDVR----GRDVVLVDELIDTGGTLATLARKLKEMGARDIYVYSSHALFNNDCLELLERAPITRVYVSNTI 352
BLAST of mRNA_S-ischiensis_contig1.1083.1 vs. uniprot
Match: D7FX99_ECTSI (Pribosyltran_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX99_ECTSI) HSP 1 Score: 333 bits (853), Expect = 6.770e-105 Identity = 185/321 (57.63%), Postives = 225/321 (70.09%), Query Frame = 3
Query: 195 DAYFEPDYDFIKVFGGSSNKPLTEEISARLGVEPGRVTLGKYADGEVMLRLDEQVRGRDIYIVQSGQKPVNDHLMELLLMVSTCQRASAKRVTAVLPYYPYKWHRRGVPVNQDLNSRFLWSAAADFGRMLEVMGVDRVIAVDLERPGQGHESSFFGPAVPVETLLTTHLFAKHMAKNVLGPDHSGGVTVVSPSSALMKKAVQFKRTLEAAGLRDVRVSTFLHDRSTAGPVDVRANELVGDMRTAVEGRTVIVVDELIDTGKTLRVLPGKLLQAGAKVIYMCSSHGLFTENAMEALDASPVEKVFVTNSVPLPSGKATPKIE 1157
D +F+PDY+++ V GGSSNK L EI+ +G++ G VTLG+YADGEVM++LDE VRG+D+YIVQSGQKPVND+L+ELLLMVST QRASAKRVTAV+P VP AAD GR+LEVMGVDRVIAVDLERPG G +F GP +PVETLLTT++F PSS L+KKA+QFKR L + DVRV TFLH R +GPVDV +NEL+G++ V+GR V++VDELIDTG TL LP +L +AGA IY+CSSHGLF NA+ L+ SPV+ VFVTNSVPLP G + KIE
Sbjct: 99 DKFFDPDYEYLMVVGGSSNKQLANEIAEEMGLKCGAVTLGRYADGEVMVQLDEHVRGKDVYIVQSGQKPVNDNLIELLLMVSTMQRASAKRVTAVIPL--------SVP-------------AADVGRLLEVMGVDRVIAVDLERPGTGSGGAFLGPGIPVETLLTTNIF---------------------PSSGLVKKAIQFKRKLREY-VDDVRVQTFLHARPNSGPVDVSSNELMGNIGE-VKGRDVVIVDELIDTGGTLGALPRRLKKAGAMNIYVCSSHGLFNANAVAILEESPVDTVFVTNSVPLPEGCKSKKIE 375
BLAST of mRNA_S-ischiensis_contig1.1083.1 vs. uniprot
Match: A0A6T5N5G5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5N5G5_HETAK) HSP 1 Score: 308 bits (789), Expect = 5.430e-95 Identity = 172/354 (48.59%), Postives = 235/354 (66.38%), Query Frame = 3
Query: 96 IAARGVAGILAVGGGVALARE----EHDSTGAANDDKDAYFEPDYDFIKVFGGSSNKPLTEEISARLGVEPGRVTLGKYADGEVMLRLDEQVRGRDIYIVQSGQKPVNDHLMELLLMVSTCQRASAKRVTAVLPYYPYKWHRRGVPVNQDLNSRFLWSAAADFGRMLEVMGVDRVIAVDLERPGQGHESSFFGPAVPVETLLTTHLFAKHMAKNVLGPDHSGGVTVVSPSSALMKKAVQFKRTLEAAGLRDVRVSTFLHDRSTAGPV--DVRANELVGDMRTAVEGRTVIVVDELIDTGKTLRVLPGKLLQAGAKVIYMCSSHGLFTENAMEALDASPVEKVFVTNSVPLPSGK 1139
+AA + G+ GGGVAL E+D D+ YF +Y+ IK+ GG+ NK L EE++ LG+ + +YADGEVM++LDE VRG+DIY+VQS PVN +MELLL S RASAKRVTAV+PY+ YK HRRG P++ L SRFLWSA++DF +MLEV+GVDRVIAVDL+RPGQGHE+ FF P +PVET++TT + AK+MAK + P V VV+P+S +KKA +F+ L + FL ++++GPV +A E +GD VEG+ V++V++L+DTG T + +L AGA IY+C+SHGLF ++E L S V+KV V N++PLP G+
Sbjct: 49 LAALALGGLAVAGGGVALCETKWGAEYDP-----DNHGPYFPENYEKIKIIGGNGNKKLAEEVAEALGINLMKSRTAQYADGEVMVQLDENVRGKDIYVVQSCAAPVNVAIMELLLTCSAVARASAKRVTAVIPYFAYKHHRRGAPISTGLKSRFLWSASSDFAKMLEVVGVDRVIAVDLQRPGQGHEACFFSPQIPVETIMTTEMAAKYMAKRMHFPRP---VCVVAPNSETIKKARKFELKFRKRVLVPTSLGAFLPKQASSGPVAPTSKAFEFMGD----VEGKDVVIVEDLVDTGATCVEMARQLRAAGAADIYVCASHGLFGPGSIERLRESGVKKVVVLNTLPLPEGQ 390
BLAST of mRNA_S-ischiensis_contig1.1083.1 vs. uniprot
Match: A0A7S0SUR5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SUR5_9STRA) HSP 1 Score: 262 bits (670), Expect = 7.000e-78 Identity = 132/315 (41.90%), Postives = 208/315 (66.03%), Query Frame = 3
Query: 219 DFIKVFGGSSNKPLTEEISARLGVEPGRVTLGKYADGEVMLRLDEQVRGRDIYIVQSGQKPVNDHLMELLLMVSTCQRASAKRVTAVLPYYPYKWHRRGVPVNQDLNSRFLWSAAADFGRMLEVMGVDRVIAVDLERPGQGHESSFFGPAVPVETLLTTHLFAKHMAKNVLGPDHSGGVTVVSPSSALMKKAVQFKRTLEAAGLRDVRVSTFLHDRSTAGPVDVRANELVGDMRTAVEGRTVIVVDELIDTGKTLRVLPGKLLQAGAKVIYMCSSHGLFTENAMEALDASPVEKVFVTNSVPLPSGKATPKIELV 1163
D + + GSS+ L+EEI+ +G+ TL +++DGEV ++ + + G++++I+Q PVND ++ELLL VS +R+ A+RV AV+PY+ YK HRR Q S++L S+ DF +MLE MG+DRVIAVDL+RPGQGHE+ FF +P+ET++TT H+ N+ + VV+P++ +KKA F+ L+ DV+++ + + S +GP D+ ++++G+ R +EG V++VD++IDT TL L KL GAK IY+ +SHGLFT+N+M +D+SPV +V VTN++PLP +++ K+E V
Sbjct: 62 DSMAIISGSSHPELSEEIAQLIGIPLVDATLSRFSDGEVSIKFNNSISGKNVFIIQPCSAPVNDSVVELLLTVSCARRSGARRVIAVIPYFAYKHHRRNSSSXQXXXSQYLKSSPVDFAKMLESMGIDRVIAVDLQRPGQGHEACFFDNTIPLETIITTDHMVSHLINNI---PLQNPIVVVAPNAECVKKARSFQIGLQKVFKSDVQLAIYTSNESGSGPADISQSKMLGNTR--IEGADVVIVDDMIDTAGTLATLSNKLKLLGAKNIYVVASHGLFTKNSMNLIDSSPVNQVIVTNTLPLPK-ESSSKVEQV 370
BLAST of mRNA_S-ischiensis_contig1.1083.1 vs. uniprot
Match: A0A6T5V9R8_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A6T5V9R8_9STRA) HSP 1 Score: 257 bits (657), Expect = 6.790e-76 Identity = 131/334 (39.22%), Postives = 222/334 (66.47%), Query Frame = 3
Query: 180 ANDDKDAYFEPDYDFIKVFGGSSNKPLTEEISARLGVEPGRVTLGKYADGEVMLRLDEQVRGRDIYIVQSGQKPVNDHLMELLLMVSTCQRASAKRVTAVLPYYPYKWHRRGVPVNQDLNSRFLWSAAADFGRMLEVMGVDRVIAVDLERPGQGHESSFFGPAVPVETLLTTHLFAKHMAKNVL-GPDHS------GGVTVVSPSSALMKKAVQFKRTLEAAGLRDVRVSTFLHDRSTAGPVDVRANELVGDMRTAVEGRTVIVVDELIDTGKTLRVLPGKLLQAGAKVIYMCSSHGLFTENAMEALDASPVEKVFVTNSVPLPSGKATPKIEL 1160
+ND+ + +P + + V GG++N+ LT+++ LGV+PG + + +++DGE+ ++++E +RG+D +I+Q+ PVND+L+ELLL ++ +R+ A VTAV+PYY YK +RRG+P++ +SRFLWSAA+DF +ML ++GVD+VI+VDL++ GQGHES FF +PVE + + F ++ +L P ++ + +VSP++ +KKA + + L+ + + + D + ++ A E+VGD++ A VI+VD+ IDT +L +L L + GA+ +++C+SHGLFT+ +ME +D SPVEKV VT+SVPLP G + +++
Sbjct: 31 SNDNNNITSKPGLNNMTVLGGTANQELTKQVCDILGVKPGEMDVTRFSDGEIHVQINESIRGKDCFIIQTCAAPVNDNLLELLLTITAARRSGAASVTAVIPYYGYKHNRRGLPISSTYHSRFLWSAASDFAKMLRILGVDKVISVDLQKSGQGHESCFFDNTIPVENISSIDSFVDYINNQLLIDPTNNKKKQITNKLVIVSPNTEYIKKAKKLELLLKQSHSNRHIDTAVILDNTHTNRLEGNA-EIVGDVKDA----DVIIVDDFIDTATSLAILCRLLKKEGARRVFICASHGLFTQTSMELIDLSPVEKVIVTDSVPLPKGSSNKIVQI 359
BLAST of mRNA_S-ischiensis_contig1.1083.1 vs. uniprot
Match: A0A812Y9R1_SYMMI (Prs protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812Y9R1_SYMMI) HSP 1 Score: 254 bits (648), Expect = 7.070e-75 Identity = 137/307 (44.63%), Postives = 207/307 (67.43%), Query Frame = 3
Query: 225 IKVFGGSSNKPLTEEISARLGVEPGRVTLGKYADGEVMLRLDEQVRGRDIYIVQSGQKPVNDHLMELLLMVSTCQRASAKRVTAVLPYYPYKWHRRGVPVNQDLNSRFLWSAAADFGRMLEVMGVDRVIAVDLERPGQGHESSFFGPAVPVETLLTTHLFAKHMAKNVLGPDHSGGVTVVSPSSALMKKAVQFKRTLEAA-GLRDVRVSTFLHDRSTAGPVDVRANE----LVGDMRTAVEGRTVIVVDELIDTGKTLRVLPGKLLQAGAKVIYMCSSHGLFTENAMEALDASPVEKVFVTNSVPLP 1130
I + G+ NK L +I+ LG+ P + L +++DGEV R+ E +RG+D++IVQ PVND +MELLLM+S +R A RVTAV+PY+ YK+HRRG P++ + SRFLWSA+ DF +M+ VMGVDR+I+VDL RPGQG E+ FF +VPVET+ ++ K + +V ++ VTVV+ + +KKA +++ + G+++V V+ F+ R G +VR + L+GD+R + VIVVD+++DTG +L + L Q GA+ +Y+C+SHG+F+ N+M+ + SPVEKVFVT+S+PLP
Sbjct: 42 IVLVPGTGNKQLAFDIACALGITPAPLKLKRFSDGEVSCRIMESMRGKDVFIVQPCANPVNDMMMELLLMISCAKRCGANRVTAVVPYFGYKYHRRGEPISTENQSRFLWSASGDFSKMMNVMGVDRIISVDLHRPGQGQETCFFDASVPVETVSSSDAVVKALLSSVRLHEN---VTVVAANPDFIKKARKYQMGISGTDGVKNVAVAAFM--RKCDGS-EVRMSRDVVRLLGDVRDS----DVIVVDDVVDTGASLSNICHALRQYGARKVYICASHGMFSANSMQLIRLSPVEKVFVTDSLPLP 338
BLAST of mRNA_S-ischiensis_contig1.1083.1 vs. uniprot
Match: A0A8K1CH52_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CH52_PYTOL) HSP 1 Score: 249 bits (635), Expect = 2.440e-72 Identity = 143/302 (47.35%), Postives = 196/302 (64.90%), Query Frame = 3
Query: 225 IKVFGGSSNKPLTEEISARLGVEPGRVTLGKYADGEVMLRLDEQVRGRDIYIVQSGQKPVNDHLMELLLMVSTCQRASAKRVTAVLPYYPYKWHRRGVPVNQDLNSRFLWSAAADFGRMLEVMGVDRVIAVDLERPGQGHESSFFGPAVPVETLLTTHLFAKHMAKNVLGPDHSGGVTVVSPSSALMKKAVQFKRTLEAAGLRDV--RVSTFLHDRSTAGPVDVRANELVGDMRTAVEGRTVIVVDELIDTGKTLRVLPGKLLQAGAKVIYMCSSHGLFTENAMEALDASPVEKVFVTNSVP 1124
+K+F GSS+ L ++I+ RLG G++ LG++ADGEV +++ E VRG+D+Y+VQS PVND+++ELLLMVST +RASAKRVT V+PYY YK HRR PV +NS+F+ S AAD +MLEVMGVDRVIAVDL+ Q HES FF +PVETL TT ++ A V V V+SP+S +++A F+ L L D R + F+H +T VD +A E+VGD V G +IVVD+LIDT +TL L + GA+ IY +SH L T A + +D S + +V V +++P
Sbjct: 89 LKIFSGSSHFELADDIARRLGTRVGKLKLGRFADGEVQVQIGESVRGKDVYLVQSLASPVNDNIIELLLMVSTMRRASAKRVTVVIPYYAYKHHRRASPVATSMNSKFIHSPAADISKMLEVMGVDRVIAVDLQLRSQPHESCFFSSHIPVETLETTLAGVEYFATQVR---LRRPVVVLSPNSECLRRARLFQNGLNK-WLPDAPARFAAFIHGTNTN--VDYKAAEIVGD----VNGADIIVVDDLIDTAETLAKLTKLAKEKGARKIYCFASHPLLTGEAEKLIDDSSISEVVVMDTIP 380
BLAST of mRNA_S-ischiensis_contig1.1083.1 vs. uniprot
Match: A0A067C1X5_SAPPC (Pribosyltran_N domain-containing protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067C1X5_SAPPC) HSP 1 Score: 247 bits (630), Expect = 9.660e-72 Identity = 140/301 (46.51%), Postives = 196/301 (65.12%), Query Frame = 3
Query: 225 IKVFGGSSNKPLTEEISARLGVEPGRVTLGKYADGEVMLRLDEQVRGRDIYIVQSGQKPVNDHLMELLLMVSTCQRASAKRVTAVLPYYPYKWHRRGVPVNQDLNSRFLWSAAADFGRMLEVMGVDRVIAVDLERPGQGHESSFFGPAVPVETLLTTHLFAKHMAKNVLGPDHSGGVTVVSPSSALMKKAVQFKRTLEAAGLRDVRVSTFLHDRSTAGPVDVRANELVGDMRTAVEGRTVIVVDELIDTGKTLRVLPGKLLQAGAKVIYMCSSHGLFTENAMEALDASPVEKVFVTNSVPL 1127
+K+F GSSN L ++I+ RLG R+ LG++ADGEV +++E VRG+D+Y+VQS +PVND+++ELLLMVST +RASAK+VTAV+PYY YK HRRG P LNS+F+ S A D +MLEVMGVDRVIAVDL+ GQGHE+SFF +PVETL T ++ A V G + V++P+ +KKA F+R L+ L D+ ++ R A +LVGD V+G VIVVD+++DT TL L + + GA+ + +SH L T NA E ++ S V +V V +++P+
Sbjct: 77 LKIFSGSSNFELADDIARRLGTRVARLKLGRFADGEVQCQIEESVRGKDVYLVQSLAQPVNDNVIELLLMVSTMRRASAKKVTAVIPYYAYKHHRRGSPSATSLNSKFVHSPAQDIAKMLEVMGVDRVIAVDLQLRGQGHEASFFNAHIPVETLDTVMAGVEYFATQVF---FKGPIVVLAPNPECVKKARVFQRGLKK-WLPDIPITFASCIRGGADGDKPDEIQLVGD----VKGAEVIVVDDMVDTSGTLCKLAAIVKEQGARRSFCLASHPLMTGNAEEDIEKSAVAEVVVMDTIPM 369
BLAST of mRNA_S-ischiensis_contig1.1083.1 vs. uniprot
Match: A0A5D6YPY6_9STRA (Pribosyltran_N domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YPY6_9STRA) HSP 1 Score: 246 bits (628), Expect = 2.180e-71 Identity = 138/307 (44.95%), Postives = 200/307 (65.15%), Query Frame = 3
Query: 225 IKVFGGSSNKPLTEEISARLGVEPGRVTLGKYADGEVMLRLDEQVRGRDIYIVQSGQKPVNDHLMELLLMVSTCQRASAKRVTAVLPYYPYKWHRRGVPVNQDLNSRFLWSAAADFGRMLEVMGVDRVIAVDLERPGQGHESSFFGPAVPVETLLTTHLFAKHMAKNVLGPDHSGGVTVVSPSSALMKKAVQFKRTLEAAGLRD--VRVSTFLHDRSTAGPVDVRANELVGDMRTAVEGRTVIVVDELIDTGKTLRVLPGKLLQAGAKVIYMCSSHGLFTENAMEALDASPVEKVFVTNSVPLPSGK 1139
+K+F GSS+ L ++I+ RLG G++ LG++ADGEV +++ E VRG+D+Y+VQS PVN++++ELLLMVST +RASAKRVT V+PYY YK HRRG P++ +NS+F+ S AAD +MLEVMGVDRVIAVDL+ QGHE+SFF VPVETL T ++ A V + ++SP+ +++A F+ + L D R + F+H G D ++VGD V+G VIVVD+LID+G+TL L + GA+ +Y +SH L +A + +D S V +V V +++P+P G+
Sbjct: 82 LKIFSGSSHFELADDIARRLGTRVGKMKLGRFADGEVQVQIGESVRGKDVYLVQSLATPVNENVIELLLMVSTMRRASAKRVTVVVPYYAYKHHRRGNPMSTSMNSKFIQSPAADIAKMLEVMGVDRVIAVDLQLRMQGHEASFFSSNVPVETLETIMAGVEYFATQV---HLRRPLVILSPNPECLRRARVFQNGMNK-WLPDSPARFAAFIHGTGANG--DYTEADIVGD----VKGADVIVVDDLIDSGETLAKLTKMAMNKGARKVYCFASHPLLAGDAEKMIDESDVAEVIVMDTIPMPLGE 378 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig1.1083.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig1.1083.1 >prot_S-ischiensis_contig1.1083.1 ID=prot_S-ischiensis_contig1.1083.1|Name=mRNA_S-ischiensis_contig1.1083.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=454bp MFGRWVGRLPRARARGGADALLIAARGVAGILAVGGGVALAREEHDSTGAback to top mRNA from alignment at S-ischiensis_contig1:7496210..7501747- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig1.1083.1 ID=mRNA_S-ischiensis_contig1.1083.1|Name=mRNA_S-ischiensis_contig1.1083.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=5538bp|location=Sequence derived from alignment at S-ischiensis_contig1:7496210..7501747- (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig1:7496210..7501747- >mRNA_S-ischiensis_contig1.1083.1 ID=mRNA_S-ischiensis_contig1.1083.1|Name=mRNA_S-ischiensis_contig1.1083.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=2724bp|location=Sequence derived from alignment at S-ischiensis_contig1:7496210..7501747- (Schizocladia ischiensis KU_0333)back to top |