mRNA_S-ischiensis_contig1.1034.1 (mRNA) Schizocladia ischiensis KU_0333
|
Overview
Homology
BLAST of mRNA_S-ischiensis_contig1.1034.1 vs. uniprot
Match: A0A6H5KP68_9PHAE (Eukaryotic translation initiation factor 3 subunit H n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KP68_9PHAE) HSP 1 Score: 522 bits (1345), Expect = 8.420e-181 Identity = 276/350 (78.86%), Postives = 302/350 (86.29%), Query Frame = 3
Query: 45 MSGAWGTGTAEKLGSKAPQLISEVHIDGLAVLKIVKHCTESLPQMVAGSLLGLDQSGVLEVTHSFPFPTAKGSTEGVGAGGAAAPQEDIDGQDYQMEMMKMLREVNMDNNCVGWYQSMYLGSFCTQTLVDNQFSYQENLSDNSVVILYDPVQTARGALTIKAYRLSKEFMRVYRQKKNEAIKPSEILEELPIKIRNPGVINALVFDLQASPRAPARDGNRMNCDFDRLDLSTNPYLEKNLEFMCNWIDDLSNEQYKFQQYTRNLQRQKQ---DQARWAQKRKQTNEERRAAGEDPLPEDDS-FDKKVEAPNRMESLLISNQISSYCAQINKFAGSSFEKLFLAGSLQKET 1082
MSGAWGT E+ + LI+EVHIDGLAVLKI+KHCTESLPQMVAGSLLGLDQ+GVLEVTH+FP PTA G G AP ED+DGQDYQMEMMKMLREVN+DNNCVG+YQSMYLGSFCTQTL+DNQFSYQENLSDNSVVILYDPVQTA G LTIKAYRLSK FMRVYR+KKNE IKPSEILEELPIKIRNPG+INAL+FDLQ + +R++CDFDRLDLSTNPYLEKNLEF+CNWIDDLSNEQ KF QYTRN+ RQKQ DQAR QKRKQ N+ERRAAGE+ LPE+DS FDKK++APNRME LLISNQIS+YC+QINKFAGSSFEKLFLAGSLQKE
Sbjct: 1 MSGAWGTEAVERAPIEEIPLITEVHIDGLAVLKIIKHCTESLPQMVAGSLLGLDQTGVLEVTHAFPLPTAA-----TGPDGQPAP-EDMDGQDYQMEMMKMLREVNVDNNCVGFYQSMYLGSFCTQTLIDNQFSYQENLSDNSVVILYDPVQTANGQLTIKAYRLSKAFMRVYREKKNEVIKPSEILEELPIKIRNPGIINALIFDLQ--------EEDRVDCDFDRLDLSTNPYLEKNLEFLCNWIDDLSNEQQKFNQYTRNVARQKQACWDQARLLQKRKQQNDERRAAGEEALPEEDSAFDKKLDAPNRMEGLLISNQISAYCSQINKFAGSSFEKLFLAGSLQKEA 336
BLAST of mRNA_S-ischiensis_contig1.1034.1 vs. uniprot
Match: A0A836CJJ9_9STRA (Eukaryotic translation initiation factor 3 subunit H n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJJ9_9STRA) HSP 1 Score: 493 bits (1270), Expect = 2.910e-169 Identity = 247/352 (70.17%), Postives = 295/352 (83.81%), Query Frame = 3
Query: 45 MSGAWGTGTAEKLGSKAPQLISEVHIDGLAVLKIVKHCTESLPQMVAGSLLGLDQSGVLEVTHSFPFPTAK--GSTEGVGAGGAAAPQEDID---GQDYQMEMMKMLREVNMDNNCVGWYQSMYLGSFCTQTLVDNQFSYQENLSDNSVVILYDPVQTARGALTIKAYRLSKEFMRVYRQKKNEAIKPSEILEELPIKIRNPGVINALVFDLQASPRAPARDGNRMNCDFDRLDLSTNPYLEKNLEFMCNWIDDLSNEQYKFQQYTRNLQRQKQDQARWAQKRKQTNEERRAAGEDPLPEDDSFDKKVEAPNRMESLLISNQISSYCAQINKFAGSSFEKLFLAGSLQKETS 1085
MSGAWG E+ K LI EVH+DGLAVLKI+KHCTE+LP MVAGSLLGLDQS LEVTHSFP P+AK T G G G A P +++ GQDYQMEMMKMLREVN+DNNCVGWYQSMYLGSFCTQTLVDNQ++YQENLSDN+VV+LYDPVQTARG LT+KAYRLSKEFMR YR++K++ IKPSEIL+ELPI+IRNPG++NALV+DLQ A + + CDF+RLDLSTNPYLEKNLEF+C W+DDL+NEQ+KFQ YTR L +Q+ D ARWA +RK+ N+ERRAAG++PLP+D++ D++ +APNRMESLLIS QIS+YC+QIN+F GSSFEKLFLAGSLQ+E +
Sbjct: 1 MSGAWGAPAPERAAMKELPLIKEVHMDGLAVLKIIKHCTEALPGMVAGSLLGLDQSATLEVTHSFPLPSAKKEADTGGEGGVGLARPADELSNLSGQDYQMEMMKMLREVNVDNNCVGWYQSMYLGSFCTQTLVDNQYTYQENLSDNAVVVLYDPVQTARGQLTLKAYRLSKEFMRAYRERKSDHIKPSEILDELPIRIRNPGLVNALVYDLQGRGGAGSAE-----CDFERLDLSTNPYLEKNLEFLCGWVDDLANEQWKFQAYTRTLLKQRHDAARWADRRKKANDERRAAGDEPLPDDEAHDRRPDAPNRMESLLISTQISAYCSQINRFTGSSFEKLFLAGSLQREAT 347
BLAST of mRNA_S-ischiensis_contig1.1034.1 vs. uniprot
Match: A0A6V1NQH4_HETAK (Eukaryotic translation initiation factor 3 subunit H n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NQH4_HETAK) HSP 1 Score: 397 bits (1021), Expect = 7.520e-132 Identity = 208/346 (60.12%), Postives = 261/346 (75.43%), Query Frame = 3
Query: 54 AW-GTGTAEKLGSKAPQLISEVHIDGLAVLKIVKHCTESLPQMVAGSLLGLDQSGVLEVTHSFPFPTAKGSTEGVGAGGAAAPQEDIDGQDYQMEMMKMLREVNMDNNCVGWYQSMYLGSFCTQTLVDNQFSYQENLSDNSVVILYDPVQTARGALTIKAYRLSKEFMRVYRQKKNEAIKPSEILEELPIKIRNPGVINALVFDLQASPRAPARDGNRMNCDFDRLDLSTNPYLEKNLEFMCNWIDDLSNEQYKFQQYTRNLQRQKQDQARWAQKRKQTNEERRAAGEDPLPE--DDSFDKKVEAPNRMESLLISNQISSYCAQINKFAGSSFEKLFLAGSLQKET 1082
AW G G AE L + +L+SEV IDGLAVL++VKHC ESLP MVAGSLLGLD+ G LE+THSFP P+ + EG GA E IDGQ++QMEMMKMLREVN+DNNCVGWYQSMYLGSF T TL++NQFSYQ+NLSDNSVVILYDP+QT+ G LT+KA+RL++ FM R+ N I+PSEILEELP++IRNPG++NALV+D+ P +C FDRLDL PYLEKNLEF+C W+DDL+ E KFQQ+ R + +Q+Q++ RW +R+ NEERR GE PLPE D + P R+ESLLI+NQI++YCAQ+N+F G+++ KL+LAGSL K+T
Sbjct: 2 AWSGQGAAEALKNTKAKLVSEVCIDGLAVLQMVKHCNESLPVMVAGSLLGLDKEGTLEITHSFPCPSE--NPEGEGA------NEGIDGQEFQMEMMKMLREVNVDNNCVGWYQSMYLGSFYTNTLIENQFSYQDNLSDNSVVILYDPIQTSNGTLTLKAFRLTQAFMERNRRGDNGFIRPSEILEELPVRIRNPGLLNALVYDVTQGPGGA-------DCTFDRLDLGGRPYLEKNLEFLCAWVDDLAAEHQKFQQHARAVAKQRQERLRWLARRRHENEERRLDGEPPLPERPDPGMFRAQGGPPRLESLLIANQINTYCAQVNRFTGAAYSKLYLAGSLHKDT 332
BLAST of mRNA_S-ischiensis_contig1.1034.1 vs. uniprot
Match: A0A7S2RWA1_9STRA (Eukaryotic translation initiation factor 3 subunit H n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RWA1_9STRA) HSP 1 Score: 330 bits (847), Expect = 1.150e-105 Identity = 187/346 (54.05%), Postives = 240/346 (69.36%), Query Frame = 3
Query: 54 AWGT--GTAEKLGSKA-PQLISEVHIDGLAVLKIVKHCTESLPQMVAGSLLGLDQSGVLEVTHSFPFPTAKGSTEGVGAGGAAAPQEDIDGQDYQMEMMKMLREVNMDNNCVGWYQSMYLGSFCTQTLVDNQFSYQENLSDNSVVILYDPVQTARGALTIKAYRLSKEFMRVYRQKKNEAIKPSEILEELPIKIRNPGVINALVFDLQASPRAPARDGNRMNCDFDRLDLSTNPYLEKNLEFMCNWIDDLSNEQYKFQQYTRNLQRQKQDQARWAQKRKQTNEERRAAGEDPLPEDDSFDKKVEAPNRMESLLISNQISSYCAQINKFAGSSFEKLFLAGSLQKET 1082
AWGT G+A L +A ++ EVHIDGL+VLKIVKHC + LP AG+LLGLDQ GVLEVTHSFP K + + A G ++D Q+YQMEMM LREVN+DNN VGWYQSM+LG+F L+ N SY E+++ NSVVILYDP+QTA+G LT++A+RLS++F+ ++ KNE I P+EILEELPIKIRNPG+INAL+FDLQ + R++CDF+RLDLSTNP+LEKNLE++ W+DDL+ EQYKFQ R +W +RKQ E +++ +AP+RM SLL+SNQIS YC+QI+ F G+SF KLFLAGSL K+
Sbjct: 25 AWGTAEGSASVLSKQARTAVVREVHIDGLSVLKIVKHCKDDLPNPAAGTLLGLDQKGVLEVTHSFPIVGPKSAEDE--AYGEDYHEQD---QEYQMEMMLSLREVNVDNNRVGWYQSMFLGTFNNIKLIQNLLSYHESIA-NSVVILYDPIQTAKGKLTLRAFRLSEKFVEAVKRDKNEFIPPAEILEELPIKIRNPGLINALLFDLQGN--------ERLDCDFERLDLSTNPFLEKNLEYLSAWVDDLAQEQYKFQSEVRR--------DKW--RRKQNPE-------------GGAEEEFQAPDRMASLLVSNQISEYCSQIHHFTGASFGKLFLAGSLHKDV 333
BLAST of mRNA_S-ischiensis_contig1.1034.1 vs. uniprot
Match: A0A7S0C594_9STRA (Eukaryotic translation initiation factor 3 subunit H n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C594_9STRA) HSP 1 Score: 327 bits (839), Expect = 2.800e-104 Identity = 179/350 (51.14%), Postives = 227/350 (64.86%), Query Frame = 3
Query: 105 ISEVHIDGLAVLKIVKHCTESLPQMVAGSLLGLDQS-GVLEVTHSFPFPTAKGSTEGVGA----GGAAAPQEDIDGQDYQMEMMKMLREVNMDNNCVGWYQSMYLGSFCTQTLVDNQFSYQENLSDNSVVILYDPVQTARGALTIKAYRLSKEFMRVYRQKKNEAIKPSEILEELPIKIRNPGVINALVFDL------QASPRAPARDGNR----------MNCDFDRLDLSTNPYLEKNLEFMCNWIDDLSNEQYKFQQYTRNLQRQKQDQARWAQKRKQTNEERRAAGEDPLPEDDSFD--KKVEAPNRMESLLISNQISSYCAQINKFAGSSFEKLFLAGSLQKETS 1085
IS VHIDGLA LKIVKHC +SLPQMV GSLLGL GVLE+TH+FPFP +T+ V A A D+DG +YQ+EMMKMLRE+N+DNNCVGWYQSMYLGS+ TQ+ V+NQ SYQ +LS N+VV+LYDPVQT G LT+K YRL+ E M + + KN I I +E+P+K+ NPG+I L+ D+ +SP + ++C FD LDLSTNPYLEK+LEF+C W+DDL++EQ+KFQ + RNL R NE+ R E E++ + +AP RMESLLI+NQI +YC Q++KFAG F KLFLA L +E S
Sbjct: 11 ISCVHIDGLAALKIVKHCQDSLPQMVTGSLLGLSVGEGVLEITHAFPFPEPSSATKNVDVVDDEENATAAAADMDGHEYQLEMMKMLREINVDNNCVGWYQSMYLGSYSTQSFVENQLSYQTDLSPNAVVVLYDPVQTTHGQLTLKCYRLTDECMELKKSGKNLYINSKNIFQEIPVKLNNPGLIQGLLLDVVDGTYNSSSPSIAVKTAATGSSDEDLDVGVDCTFDNLDLSTNPYLEKHLEFLCQWVDDLASEQHKFQYFARNLAR---------------NEKHRKKNEGSRSEENKEEGWTSPDAPRRMESLLIANQIRTYCEQVDKFAGGGFGKLFLANGLHQEES 345
BLAST of mRNA_S-ischiensis_contig1.1034.1 vs. uniprot
Match: A0A7S1GHL4_CYCTE (Eukaryotic translation initiation factor 3 subunit H n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GHL4_CYCTE) HSP 1 Score: 312 bits (800), Expect = 1.300e-98 Identity = 170/330 (51.52%), Postives = 223/330 (67.58%), Query Frame = 3
Query: 99 QLISEVHIDGLAVLKIVKHCTESLPQMVAGSLLGLDQSGVLEVTHSFPFPTAKGSTEGVGAGGAAAPQED---IDGQDYQMEMMKMLREVNMDNNCVGWYQSMYLGSFCTQTLVDNQFSYQENLSDNSVVILYDPVQTARGALTIKAYRLSKEFMRVYRQKKNEAIKPSEILEELPIKIRNPGVINALVFDLQASPRAPARDGNRMNCDFDRLDLSTNPYLEKNLEFMCNWIDDLSNEQYKFQQYTRNLQRQKQDQARWAQKRKQTNEERRAAGEDPLPEDDSFDKKVEAPNRMESLLISNQISSYCAQINKFAGSSFEKLFLAGSLQKE 1079
Q IS V I+GLA+LKIVKHC ESLPQMV GSLLGL +G+LE+TH+FP P + A G ED ++G ++Q+EMM+MLREVN+DNNCVGWYQSMYLGS+ T + +++QFSYQ LS N+VV+LYDP+QT+ G L +K +RL++E +++ KN I PS+I EE+P+ I NPG+ L+ D+ A+ R + FDRLDLSTNPYLEK+LEF+C+W+DDL+ EQ KFQ + RN R+ +KR++ E + +G+ AP RMESLLISNQI YC Q++KFAG F KLFLAG L KE
Sbjct: 20 QRISAVRIEGLALLKIVKHCHESLPQMVTGSLLGLAVNGLLEITHAFPLPETQALKTAELAKGEEEDDEDAAGVEGYEFQLEMMRMLREVNVDNNCVGWYQSMYLGSYSTSSFLESQFSYQTELSPNAVVVLYDPMQTSHGNLVLKCFRLTEECLQLQSSGKNTFIDPSKIFEEIPVDISNPGLTQVLLSDV-ATGRYGTDIVATTDTTFDRLDLSTNPYLEKHLEFLCSWVDDLATEQQKFQYFARNATRRSD-----RRKREEDKENKWLSGD--------------APKRMESLLISNQIRGYCDQMDKFAGGGFSKLFLAGGLHKE 329
BLAST of mRNA_S-ischiensis_contig1.1034.1 vs. uniprot
Match: A0A7S2LLA7_9STRA (Eukaryotic translation initiation factor 3 subunit H n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LLA7_9STRA) HSP 1 Score: 310 bits (795), Expect = 6.180e-98 Identity = 165/332 (49.70%), Postives = 216/332 (65.06%), Query Frame = 3
Query: 93 APQLISEVHIDGLAVLKIVKHCTESLPQMVAGSLLGLD-QSGVLEVTHSFPFPTAKGSTEGVGAGGAAAPQEDIDGQDYQMEMMKMLREVNMDNNCVGWYQSMYLGSFCTQTLVDNQFSYQENLSDNSVVILYDPVQTARGALTIKAYRLSKEFMRVYRQKKNEAIKPSEILEELPIKIRNPGVINALVFDLQASPRAPARDGNRMNCDFDRLDLSTNPYLEKNLEFMCNWIDDLSNEQYKFQQYTRNLQRQKQDQARWAQKRKQTNEERRAAGEDPLPEDDSFDKKVEAPNRMESLLISNQISSYCAQINKFAGSSFEKLFLAGSLQKETS 1085
A Q ++ VHIDGLAVLKIVKHC +SLP MV GSLLGL ++GVLE+TH+FPFP G +D+DG +YQ+EMMKMLRE+N+DNNCVGWYQSM GS+ T TLV+NQ YQ +LS N+VV+LYDP QT +G L ++AYRLS M ++ N I PS+ EE+PI I+N G+ NAL++DL A+ DG R CD+++LDL + Y+EKNLE MC+W+DDL+NEQ+KFQ Y R+ + K +AP R+ESLLI++QI YC Q+++FAGS+F KLFLA SL+K +
Sbjct: 43 AKQKVTAVHIDGLAVLKIVKHCQDSLPTMVTGSLLGLMVENGVLEITHAFPFPDQPKDGSG---------DDDMDGHEYQLEMMKMLREINVDNNCVGWYQSMLTGSYSTSTLVENQQGYQTDLSPNAVVLLYDPQQTLKGNLVLRAYRLSSACMNAMLKQNNSFISPSKFFEEIPIHIKNNGLANALLYDLNAN------DGGRFKCDYEQLDLEKDSYVEKNLELMCSWVDDLANEQHKFQYYARHQK-----------------------------------KDDDAPKRLESLLINHQIRQYCDQMDRFAGSNFGKLFLAKSLRKNDA 324
BLAST of mRNA_S-ischiensis_contig1.1034.1 vs. uniprot
Match: B8C426_THAPS (Eukaryotic translation initiation factor 3 subunit H n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C426_THAPS) HSP 1 Score: 308 bits (790), Expect = 4.950e-97 Identity = 172/338 (50.89%), Postives = 224/338 (66.27%), Query Frame = 3
Query: 105 ISEVHIDGLAVLKIVKHCTESLPQMVAGSLLGLD-QSGVLEVTHSFPFPT--------AKGSTEGVGAGGAAAPQEDIDGQDYQMEMMKMLREVNMDNNCVGWYQSMYLGSFCTQTLVDNQFSYQENLSDNSVVILYDPVQTARGALTIKAYRLSKEFMRVYRQKKNEAIKPSEILEELPIKIRNPGVINALVFD----LQASPRAPARDGNRMNCDFDRLDLSTNPYLEKNLEFMCNWIDDLSNEQYKFQQYTRNLQRQKQDQARWAQKRKQTNEERRAAGEDPLPEDDSFDKKVEAPNRMESLLISNQISSYCAQINKFAGSSFEKLFLAGSLQKE 1079
++ V ++GLA LKI+KHC ESLP MV GSLLGL + GVLE+TH+FPFP K + E A AA +DG ++Q+EMMKMLREVN+DNNCVGWYQSMYLGS+ T +L++NQ SYQ +LS N+VVILYDP+QTA G L +K YRL++E +++ + KN I P +I EE+P+ + NPG++ +L+ D L S A +G + FDRLDLSTNPYLEK+LEF+C+W+DDL+ EQYKFQ YTR+L+ D N + R A E+ + + EAP RMESLL+SNQI +YC Q+ KF G F KLFL L E
Sbjct: 11 VTSVKLEGLAALKIIKHCQESLPTMVTGSLLGLMIEDGVLEITHAFPFPEPLDDKGDIVKTAEEAANADDEAAA---LDGHEFQLEMMKMLREVNVDNNCVGWYQSMYLGSYSTSSLLENQLSYQTDLSPNAVVILYDPMQTAHGNLVLKCYRLTEEAVQLKQSGKNNYINPRKIFEEVPVTLSNPGLVRSLLRDVGDGLHGSYDA---EGTGADTTFDRLDLSTNPYLEKHLEFLCSWVDDLAAEQYKFQHYTRSLRSSVGD-----------NRKGRKAKEEMAQAIEEGWTRSEAPKRMESLLMSNQIRTYCDQVEKFTGDGFGKLFLTSGLHTE 331
BLAST of mRNA_S-ischiensis_contig1.1034.1 vs. uniprot
Match: A0A1Z5KJ00_FISSO (Eukaryotic translation initiation factor 3 subunit H n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KJ00_FISSO) HSP 1 Score: 307 bits (787), Expect = 1.000e-96 Identity = 173/349 (49.57%), Postives = 231/349 (66.19%), Query Frame = 3
Query: 90 KAPQLISEVHIDGLAVLKIVKHCTESLPQMVAGSLLGLDQSG-VLEVTHSFPFPTAKGSTEGVGAGGAAAPQE----DIDGQDYQMEMMKMLREVNMDNNCVGWYQSMYLGSFCTQTLVDNQFSYQENLSDNSVVILYDPVQTARGALTIKAYRLSKEFMRVYRQKKNEAIKPSEILEELPIKIRNPGVINALVFDLQASPRAPA---------RDGNRMNCD-----FDRLDLSTNPYLEKNLEFMCNWIDDLSNEQYKFQQYTRNLQRQKQDQARWAQKRKQTNEERRAAGEDPLPEDDSFDKKVEAPNRMESLLISNQISSYCAQINKFAGSSFEKLFLAGSLQKE 1079
+A + IS+VHI+GLA++KIVKHC ESLP MV+GSLLGL+ SG +LEVTH+FPFP ++ + AG AAA + D DG +YQ+EMM+MLREVN+DNNCVGWYQSMYLG + T +L++NQ SYQ +LS N+VVILYDP+QT G L +K YRL++E +R+ ++N I P +I EE+P+K+ NPG++ AL+ D+ + + NR+ FDRLDLSTNPYLEK+LEF+C W+DDL+ EQ K Q Y R L R K +RK + +AG+ D AP RMESLLI+NQI SYC Q+N+F EK++L +QK+
Sbjct: 6 EASERISQVHIEGLALMKIVKHCHESLPHMVSGSLLGLEVSGGILEVTHAFPFPDSRAA-----AGSAAAVSDTMEGDQDGHEYQIEMMRMLREVNVDNNCVGWYQSMYLGIYSTSSLLENQLSYQTDLSPNAVVILYDPMQTTHGKLALKCYRLTEECIRLKENEENAFIDPRKIFEEVPVKLTNPGLVKALLMDVADGVHDDSSNLQLFEKEHNTNRLGSSTVKTTFDRLDLSTNPYLEKHLEFLCGWVDDLAVEQQKMQFYARQLHRDKH-------RRKDS-----SAGDAWASSD--------APRRMESLLITNQIRSYCEQMNQFTSEGIEKVYLMSGMQKK 329
BLAST of mRNA_S-ischiensis_contig1.1034.1 vs. uniprot
Match: K0SND2_THAOC (Eukaryotic translation initiation factor 3 subunit H n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SND2_THAOC) HSP 1 Score: 305 bits (780), Expect = 1.310e-95 Identity = 159/330 (48.18%), Postives = 216/330 (65.45%), Query Frame = 3
Query: 105 ISEVHIDGLAVLKIVKHCTESLPQMVAGSLLGLD-QSGVLEVTHSFPFPTAKGSTEGVGAGGAAAPQED----IDGQDYQMEMMKMLREVNMDNNCVGWYQSMYLGSFCTQTLVDNQFSYQENLSDNSVVILYDPVQTARGALTIKAYRLSKEFMRVYRQKKNEAIKPSEILEELPIKIRNPGVINALVFDLQASPRAPARDGNRMNCDFDRLDLSTNPYLEKNLEFMCNWIDDLSNEQYKFQQYTRNLQRQKQDQARWAQKRKQTNEERRAAGEDPLPEDDSFDKKVEAPNRMESLLISNQISSYCAQINKFAGSSFEKLFLAGSLQKE 1079
++ V ++GLA LKI+KHC ESLP MV GSLLGL + G LE+TH+FPFP + A +D +DG ++Q+EMMKMLREVN+DNNC+GWYQSMYLG+ T +L+DNQ +YQ +LS N+VV+LYDP+QTA G+L +K YRL+ E +++ KN I P EI +E+P+ + NPG++ +L+ D+ P + + FDRLDLSTNPYLEK+LEF+C W+DDL++EQYKFQ YTR+L+ T + R A ++ K +AP RMESLL+SNQI +YC Q+ KF G F KLF+ + KE
Sbjct: 11 VTSVKLEGLAALKIIKHCQESLPTMVTGSLLGLMIEDGCLEITHAFPFPEPLNDKGDIVKTADEANVDDEAAALDGHEFQLEMMKMLREVNVDNNCIGWYQSMYLGTHSTPSLLDNQLAYQADLSPNAVVVLYDPMQTAHGSLVLKCYRLTDEAVKLKTSGKNTFINPREIFQEVPVTLNNPGLVRSLLRDMGDGLHGPYGEEGGPDTTFDRLDLSTNPYLEKHLEFLCTWVDDLASEQYKFQHYTRSLR-----------SNVDTRNKGRKAKDELAQAIQEGWTKSDAPRRMESLLMSNQIRTYCDQVEKFTGGGFGKLFMTSGIHKE 329 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig1.1034.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig1.1034.1 >prot_S-ischiensis_contig1.1034.1 ID=prot_S-ischiensis_contig1.1034.1|Name=mRNA_S-ischiensis_contig1.1034.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=348bp MSGAWGTGTAEKLGSKAPQLISEVHIDGLAVLKIVKHCTESLPQMVAGSLback to top mRNA from alignment at S-ischiensis_contig1:7132925..7140135+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig1.1034.1 ID=mRNA_S-ischiensis_contig1.1034.1|Name=mRNA_S-ischiensis_contig1.1034.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=7211bp|location=Sequence derived from alignment at S-ischiensis_contig1:7132925..7140135+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig1:7132925..7140135+ >mRNA_S-ischiensis_contig1.1034.1 ID=mRNA_S-ischiensis_contig1.1034.1|Name=mRNA_S-ischiensis_contig1.1034.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=2088bp|location=Sequence derived from alignment at S-ischiensis_contig1:7132925..7140135+ (Schizocladia ischiensis KU_0333)back to top |