prot_S-ischiensis_contig92.20948.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig92.20948.1
Unique Nameprot_S-ischiensis_contig92.20948.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length493
Homology
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BLAST of mRNA_S-ischiensis_contig92.20948.1 vs. uniprot
Match: D7G2A6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2A6_ECTSI)

HSP 1 Score: 90.5 bits (223), Expect = 9.300e-17
Identity = 40/70 (57.14%), Postives = 54/70 (77.14%), Query Frame = 0 
Query:  297 RSNRFPGVSFFKGRYTAQMTWGGQQYYLSRYDTAEQAHAVIKKAVMEVKETGYLTCPRHSGFKVLEVVPP 366
            R++++ GVSFFKGR+TAQ TWGG+QYYL RYDT  +AH V+++A  EV ETG LT PR+ G +V+ +  P
Sbjct:  182 RTSKYHGVSFFKGRFTAQFTWGGKQYYLGRYDTEGEAHTVVQRATKEVMETGNLTLPRNRGNEVVRLGAP 251
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BLAST of mRNA_S-ischiensis_contig92.20948.1 vs. uniprot
Match: A0A6H5K639_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K639_9PHAE)

HSP 1 Score: 92.0 bits (227), Expect = 5.060e-16
Identity = 41/70 (58.57%), Postives = 54/70 (77.14%), Query Frame = 0 
Query:  297 RSNRFPGVSFFKGRYTAQMTWGGQQYYLSRYDTAEQAHAVIKKAVMEVKETGYLTCPRHSGFKVLEVVPP 366
            R++++ GVSFFKGRYTAQ TWGG+QYYL RYDT  +AH V+++A  EV ETG LT PR+ G +V++   P
Sbjct:  248 RTSKYHGVSFFKGRYTAQFTWGGKQYYLGRYDTEGEAHTVVQRATKEVMETGSLTLPRNRGNEVVQFGAP 317
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig92.20948.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G2A6_ECTSI9.300e-1757.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K639_9PHAE5.060e-1658.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 52..72

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig92contigS-ischiensis_contig92:389126..401842 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig92.20948.1mRNA_S-ischiensis_contig92.20948.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig92 388938..401842 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig92.20948.1 ID=prot_S-ischiensis_contig92.20948.1|Name=mRNA_S-ischiensis_contig92.20948.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=493bp
MTGPLARRRAKGPSYSYAVEDQNGSDVSTQQHSRKALAVERQEASLLPAA
AVAQLLEDNSKALVELMELQKQHNGQTNGTSITGSGGGSGSSSSSKSSSS
RSNDKGSGDKDKDKDPSSLSSSGGASENPGSIASVGSHKNHASGNGNGNG
NAHVDLHVGPELLRRAKMVQGGVYNRLKLLAAWGDLEHKDVVLGNEYNRH
RGDLLRSSSTAGNSHASYYMAQQQYYQRQQQRQRQHQRFQQQQQQPGYGA
SQYPPLAQVAPKRPYEAIGASADTREPGAKRSTSSASSASTSTYSARSNR
FPGVSFFKGRYTAQMTWGGQQYYLSRYDTAEQAHAVIKKAVMEVKETGYL
TCPRHSGFKVLEVVPPHLLNSPEVIAEGERRLAAANAPPRPPVVQAVPSP
PPSPPLSQAPPPQPIAPAPAPLAAMAGSYSYGGYNMPASGHLAPPMPPFQ
PWPTREPAGAVRGGQAGNQQVQVPPPRSIHVRGPVLPAVAAAA
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