prot_S-ischiensis_contig90.20882.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig90.20882.1
Unique Nameprot_S-ischiensis_contig90.20882.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length192
Homology
BLAST of mRNA_S-ischiensis_contig90.20882.1 vs. uniprot
Match: E8T6H9_THEA1 (Secreted protein n=1 Tax=Thermovibrio ammonificans (strain DSM 15698 / JCM 12110 / HB-1) TaxID=648996 RepID=E8T6H9_THEA1)

HSP 1 Score: 79.0 bits (193), Expect = 6.550e-14
Identity = 47/112 (41.96%), Postives = 66/112 (58.93%), Query Frame = 0
Query:    9 IYSNNIKTFMSEGIDVKEGASLNEIYNNRVRKSVQETTGGIQIRGDNNHVYENQVTGCTTAGVRIGGSTTAKAGGGSYQWGKNNKVTDNVLDNNLNGPVKVMVAPQAEICGN 120
            I  N I T+ +E +DVKEGA+   I NN   KS+Q+T+GGI +RG+   +  N V     AG+R+GG T         ++G  N+VT N LDNNL   +K+M  PQ ++C N
Sbjct:  244 IRYNTIATYGAECVDVKEGATKIVIENNVCLKSMQKTSGGISVRGNREVIRYNIVFDNKGAGIRLGGDTK--------EFGIENEVTYNFLDNNLKAALKIMRTPQDKMCSN 347          
BLAST of mRNA_S-ischiensis_contig90.20882.1 vs. uniprot
Match: A0A6H5JFC7_9PHAE (PPIase cyclophilin-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFC7_9PHAE)

HSP 1 Score: 74.3 bits (181), Expect = 4.230e-12
Identity = 44/127 (34.65%), Postives = 67/127 (52.76%), Query Frame = 0
Query:    2 DRSQYNRIYSNNIKTFMSEGIDVKEGASLNEIYNNRVRKSVQETTGGIQIRGDNNHVYENQVTGCTTAGVRIGGSTTAKAGGGSYQWGKNNKVTDNVLDNNLNGPVKVMVAPQAEICGNSCSTGRCD 128
            D S YN  + N+  T  +EGID+KEGA  N + +N         +  +  RGD+N    N       AG+RIGG    K  G  +Q+G+NN+V +N+L+NN    +K+ ++PQ  +C N     + D
Sbjct:  531 DESSYNHFFKNHFDTQGNEGIDIKEGARYNIVEDNYCTGQKDPNSACLDARGDSNIFRFNTCEDNLGAGIRIGGH---KIDG--HQYGQNNEVYENLLENNGYAGIKITMSPQGAVCSNDILGSKYD 652          
BLAST of mRNA_S-ischiensis_contig90.20882.1 vs. uniprot
Match: D7G3L7_ECTSI (FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3L7_ECTSI)

HSP 1 Score: 73.2 bits (178), Expect = 7.440e-12
Identity = 43/127 (33.86%), Postives = 67/127 (52.76%), Query Frame = 0
Query:    2 DRSQYNRIYSNNIKTFMSEGIDVKEGASLNEIYNNRVRKSVQETTGGIQIRGDNNHVYENQVTGCTTAGVRIGGSTTAKAGGGSYQWGKNNKVTDNVLDNNLNGPVKVMVAPQAEICGNSCSTGRCD 128
            D S YN  + N+  T  +EGID+KEG+  N + +N         +  +  RGD+N    N       AG+RIGG    K  G  +Q+G+NN+V +N+L+NN    +K+ ++PQ  +C N     + D
Sbjct:  227 DESSYNHFFKNHFDTQGNEGIDIKEGSRYNIVEDNYCTGQKDPNSACLDARGDSNIFRFNTCEDNLGAGIRIGGH---KIDG--HQYGQNNEVYENLLENNDYAGIKITMSPQGAVCSNDILGSKYD 348          
BLAST of mRNA_S-ischiensis_contig90.20882.1 vs. uniprot
Match: UPI001182AEF9 (right-handed parallel beta-helix repeat-containing protein n=2 Tax=Catellatospora TaxID=53365 RepID=UPI001182AEF9)

HSP 1 Score: 66.2 bits (160), Expect = 1.900e-9
Identity = 51/148 (34.46%), Postives = 72/148 (48.65%), Query Frame = 0
Query:    2 DRSQYNRIYSNNIKTFMSEGIDVKEGASLNEI-YNNRVRKSVQE-TTGGIQIRGDNNHVYENQVTGCTTAGVRIGGSTTAKAGGGSYQWGKNNKVTDNVLDNNLNGPVKVM-VAPQAEICGNSCSTGRCDPTVLSSKDDELRDWDQAC 146
            D S  NR+Y N   T  +E +DVKEGAS N+I +N    ++ +   +G I+ RG  N +  N +     AGVRIGG     A G        N V  N + +N  G +KV    P   ICGN+ S G     ++ +  D++ D   AC
Sbjct:  226 DASNGNRVYGNVFDTRGAECVDVKEGASHNDIAFNTCTGQAARNGNSGAIESRGSYNTIRGNVIHHNAAAGVRIGGDLPGDAVG--------NDVYANTITDNARGGIKVQEFGPHGRICGNTMS-GNVGGDLIGTYADQVADPTAAC 364          
BLAST of mRNA_S-ischiensis_contig90.20882.1 vs. uniprot
Match: A0A543D166_9PSEU (Uncharacterized protein DUF1565 n=1 Tax=Pseudonocardia kunmingensis TaxID=630975 RepID=A0A543D166_9PSEU)

HSP 1 Score: 62.8 bits (151), Expect = 3.030e-8
Identity = 45/122 (36.89%), Postives = 57/122 (46.72%), Query Frame = 0
Query:    2 DRSQYNRIYSNNIKTFMSEGIDVKEGASLNEIYNNRVRKSVQET--TGGIQIRGDNNHVYENQVTGCTTAGVRIGGSTTAKAGGGSYQWGKNNKVTDNVLDNNLNGPVKVM-VAPQAEICGN 120
            D S  NR++ N I T   E +D+KEGAS N++  N     +     +G +  RG  N    N +     AGVRIGG     A G        N V DNV+  N  G +KV    PQ  ICGN
Sbjct:  222 DASNGNRVHRNVIDTDGGECVDIKEGASHNDVAFNTCTGQLPRNGNSGAMDTRGSYNTFRSNHIHHNAAAGVRIGGDRPGDAVG--------NAVRDNVITGNARGGIKVQDPGPQGAICGN 335          
BLAST of mRNA_S-ischiensis_contig90.20882.1 vs. uniprot
Match: A0A263DF98_9PSEU (Uncharacterized protein n=1 Tax=Pseudonocardia sp. MH-G8 TaxID=1854588 RepID=A0A263DF98_9PSEU)

HSP 1 Score: 61.2 bits (147), Expect = 1.030e-7
Identity = 44/122 (36.07%), Postives = 58/122 (47.54%), Query Frame = 0
Query:    2 DRSQYNRIYSNNIKTFMSEGIDVKEGASLNEIYNNRVRKSVQET--TGGIQIRGDNNHVYENQVTGCTTAGVRIGGSTTAKAGGGSYQWGKNNKVTDNVLDNNLNGPVKVM-VAPQAEICGN 120
            D S  NR++ N I T   E +D+KEGAS N++  N     +     +G +  RG +N    N +     AGVRIGG     A G          V DNV+ +N  G +KV    PQ  ICGN
Sbjct:  223 DASNGNRVHHNVIDTRGGECVDIKEGASHNDVAFNTCTGQLPRNGNSGAMDTRGSHNTFRSNHIHHNAAAGVRIGGDRPGDAIG--------TVVRDNVITDNARGGIKVQDPGPQGAICGN 336          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig90.20882.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
E8T6H9_THEA16.550e-1441.96Secreted protein n=1 Tax=Thermovibrio ammonificans... [more]
A0A6H5JFC7_9PHAE4.230e-1234.65PPIase cyclophilin-type domain-containing protein ... [more]
D7G3L7_ECTSI7.440e-1233.86FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
UPI001182AEF91.900e-934.46right-handed parallel beta-helix repeat-containing... [more]
A0A543D166_9PSEU3.030e-836.89Uncharacterized protein DUF1565 n=1 Tax=Pseudonoca... [more]
A0A263DF98_9PSEU1.030e-736.07Uncharacterized protein n=1 Tax=Pseudonocardia sp.... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006626Parallel beta-helix repeatSMARTSM00710pbh1coord: 4..26
e-value: 1400.0
score: 6.1
coord: 89..111
e-value: 710.0
score: 8.3
coord: 53..75
e-value: 8.2
score: 15.4
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 1..138
e-value: 7.8E-9
score: 36.7
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 3..132

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig90contigS-ischiensis_contig90:428976..432681 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig90.20882.1mRNA_S-ischiensis_contig90.20882.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig90 428825..433092 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig90.20882.1 ID=prot_S-ischiensis_contig90.20882.1|Name=mRNA_S-ischiensis_contig90.20882.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=192bp
MDRSQYNRIYSNNIKTFMSEGIDVKEGASLNEIYNNRVRKSVQETTGGIQ
IRGDNNHVYENQVTGCTTAGVRIGGSTTAKAGGGSYQWGKNNKVTDNVLD
NNLNGPVKVMVAPQAEICGNSCSTGRCDPTVLSSKDDELRDWDQACGVLS
PLGPPTYPQFEGCPAALVAPALVVEAIEAQPAGGDAVSLII*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006626PbH1
IPR012334Pectin_lyas_fold
IPR011050Pectin_lyase_fold/virulence